RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 LINC01547P58512 204 aaPredicted RBP6.7□□□□□ -1.34
CDCA3-201ENST00000229265 Q9BRP9 147 aa6.7□□□□□ -1.34
CDCA3-201ENST00000229265 A0A1B0GV72 72 aa6.69□□□□□ -1.34
CDCA3-201ENST00000229265 SMCR5Q8TEV8 140 aa6.69□□□□□ -1.34
CDCA3-201ENST00000229265 IGKV2-24A0A0C4DH68 120 aa6.68□□□□□ -1.34
CDCA3-201ENST00000229265 KRTAP10-1P60331 282 aa6.68□□□□□ -1.34
CDCA3-201ENST00000229265 UBE2BP63146 152 aa6.68□□□□□ -1.34
CDCA3-201ENST00000229265 BCE1O60756 84 aa6.67□□□□□ -1.34
CDCA3-201ENST00000229265 SPRR1BP22528 89 aa6.67□□□□□ -1.34
CDCA3-201ENST00000229265 SPACA4Q8TDM5 124 aa6.67□□□□□ -1.34
CDCA3-201ENST00000229265 DPH3Q96FX2 82 aa6.67□□□□□ -1.34
CDCA3-201ENST00000229265 IGLV8-61A0A075B6I0 122 aa6.66□□□□□ -1.34
CDCA3-201ENST00000229265 CXCL6P80162 114 aa6.66□□□□□ -1.34
CDCA3-201ENST00000229265 FAM19A1Q7Z5A9 133 aa6.66□□□□□ -1.34
CDCA3-201ENST00000229265 PKHD1L1Q86WI1 4243 aa6.65□□□□□ -1.35
CDCA3-201ENST00000229265 PLAC8Q9NZF1 115 aa6.64□□□□□ -1.35
CDCA3-201ENST00000229265 F8WEM9 126 aa6.63□□□□□ -1.35
CDCA3-201ENST00000229265 PHF5AQ7RTV0 110 aaKnown RBP6.63□□□□□ -1.35
CDCA3-201ENST00000229265 DEFB105AQ8NG35 78 aa6.63□□□□□ -1.35
CDCA3-201ENST00000229265 SPRR4Q96PI1 79 aa6.63□□□□□ -1.35
CDCA3-201ENST00000229265 FAM30AQ9NZY2 134 aa6.63□□□□□ -1.35
CDCA3-201ENST00000229265 CDK2AP2O75956 126 aa6.62□□□□□ -1.35
CDCA3-201ENST00000229265 RPL37AP61513 92 aaKnown RBP6.62□□□□□ -1.35
CDCA3-201ENST00000229265 ANAPC13Q9BS18 74 aa6.62□□□□□ -1.35
CDCA3-201ENST00000229265 LRP1Q07954 4544 aaKnown RBP6.62□□□□□ -1.35
CDCA3-201ENST00000229265 IGLV5-52A0A0A0MRZ9 124 aa6.61□□□□□ -1.35
CDCA3-201ENST00000229265 ERC2-IT1O76042 136 aa6.61□□□□□ -1.35
CDCA3-201ENST00000229265 HIST1H4AP62805 103 aaKnown RBP6.61□□□□□ -1.35
CDCA3-201ENST00000229265 C1orf137Q5JT78 98 aa6.61□□□□□ -1.35
CDCA3-201ENST00000229265 Q6ZVQ6 151 aa6.61□□□□□ -1.35
CDCA3-201ENST00000229265 SMIM29Q86T20 159 aa6.61□□□□□ -1.35
CDCA3-201ENST00000229265 ATOX1O00244 68 aa6.6□□□□□ -1.35
CDCA3-201ENST00000229265 CHTF8P0CG12 524 aa6.6□□□□□ -1.35
CDCA3-201ENST00000229265 UBE2AP49459 152 aa6.6□□□□□ -1.35
CDCA3-201ENST00000229265 NREPQ16612 68 aa6.6□□□□□ -1.35
CDCA3-201ENST00000229265 KRTAP13-1Q8IUC0 172 aa6.6□□□□□ -1.35
CDCA3-201ENST00000229265 FAT3Q8TDW7 4589 aa6.6□□□□□ -1.35
CDCA3-201ENST00000229265 CRYGAP11844 174 aa6.59□□□□□ -1.35
CDCA3-201ENST00000229265 Q8N1X5 172 aa6.59□□□□□ -1.35
CDCA3-201ENST00000229265 ZNF706Q9Y5V0 76 aaPredicted RBP6.59□□□□□ -1.35
CDCA3-201ENST00000229265 SRRM2Q9UQ35 2752 aaKnown RBP6.58□□□□□ -1.36
CDCA3-201ENST00000229265 ST20-AS1Q8NBB2 130 aa6.58□□□□□ -1.36
CDCA3-201ENST00000229265 Q8NBF4 154 aa6.58□□□□□ -1.36
CDCA3-201ENST00000229265 SMR3BP02814 79 aaPredicted RBP6.57□□□□□ -1.36
CDCA3-201ENST00000229265 SMIM20Q8N5G0 67 aa6.57□□□□□ -1.36
CDCA3-201ENST00000229265 HIGD2AQ9BW72 106 aa6.57□□□□□ -1.36
CDCA3-201ENST00000229265 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.57□□□□□ -1.36
CDCA3-201ENST00000229265 FLG2Q5D862 2391 aaPredicted RBP6.56□□□□□ -1.36
CDCA3-201ENST00000229265 IGKV3D-7A0A0C4DH55 119 aa6.56□□□□□ -1.36
CDCA3-201ENST00000229265 FAM236AA0A1B0GUQ0 79 aa6.55□□□□□ -1.36
CDCA3-201ENST00000229265 FAM236BA0A1B0GV22 79 aa6.55□□□□□ -1.36
CDCA3-201ENST00000229265 A0A1W2PNM2 257 aa6.55□□□□□ -1.36
CDCA3-201ENST00000229265 PANO1I0J062 215 aa6.55□□□□□ -1.36
CDCA3-201ENST00000229265 PRLHP81277 87 aa6.55□□□□□ -1.36
CDCA3-201ENST00000229265 ZNF861PO60384 105 aa6.54□□□□□ -1.36
CDCA3-201ENST00000229265 LINC00483Q53H64 154 aa6.54□□□□□ -1.36
CDCA3-201ENST00000229265 KRTAP11-1Q8IUC1 163 aa6.54□□□□□ -1.36
CDCA3-201ENST00000229265 BPY2O14599 106 aa6.52□□□□□ -1.37
CDCA3-201ENST00000229265 UQCRQO14949 82 aa6.52□□□□□ -1.37
CDCA3-201ENST00000229265 KRTAP10-4P60372 401 aaPredicted RBP6.51□□□□□ -1.37
CDCA3-201ENST00000229265 IGFL1Q6UW32 110 aa6.51□□□□□ -1.37
CDCA3-201ENST00000229265 PSORS1C2Q9UIG4 136 aa6.51□□□□□ -1.37
CDCA3-201ENST00000229265 COX7CP15954 63 aa6.5□□□□□ -1.37
CDCA3-201ENST00000229265 Q5VSD8 79 aa6.5□□□□□ -1.37
CDCA3-201ENST00000229265 Q6ZSA8 131 aa6.5□□□□□ -1.37
CDCA3-201ENST00000229265 C3orf22Q8N5N4 141 aa6.5□□□□□ -1.37
CDCA3-201ENST00000229265 SERP2Q8N6R1 65 aa6.5□□□□□ -1.37
CDCA3-201ENST00000229265 IGLV7-43P04211 117 aa6.47□□□□□ -1.37
CDCA3-201ENST00000229265 J3KT08 172 aa6.46□□□□□ -1.38
CDCA3-201ENST00000229265 HMCN2Q8NDA2 5059 aa6.46□□□□□ -1.38
CDCA3-201ENST00000229265 TRAV7A0A075B6U4 112 aa6.45□□□□□ -1.38
CDCA3-201ENST00000229265 A0A087WVE0 104 aa6.45□□□□□ -1.38
CDCA3-201ENST00000229265 SSBP3-AS1Q7Z2R9 100 aa6.45□□□□□ -1.38
CDCA3-201ENST00000229265 CIRBP-AS1Q8TBR5 109 aa6.45□□□□□ -1.38
CDCA3-201ENST00000229265 CD164Q04900 197 aa6.43□□□□□ -1.38
CDCA3-201ENST00000229265 SCXQ7RTU7 201 aa6.43□□□□□ -1.38
CDCA3-201ENST00000229265 IGKV4-1P06312 121 aa6.42□□□□□ -1.38
CDCA3-201ENST00000229265 SS18L2Q9UHA2 77 aa6.42□□□□□ -1.38
CDCA3-201ENST00000229265 A0A087WSZ3 146 aa6.4□□□□□ -1.38
CDCA3-201ENST00000229265 CCDC179H3BU77 68 aa6.4□□□□□ -1.38
CDCA3-201ENST00000229265 LINC00472Q9H8W2 130 aa6.4□□□□□ -1.38
CDCA3-201ENST00000229265 TNXBP22105 4242 aa6.39□□□□□ -1.39
CDCA3-201ENST00000229265 DMBT1Q9UGM3 2413 aaPredicted RBP6.39□□□□□ -1.39
CDCA3-201ENST00000229265 DSCR10P59022 87 aa6.39□□□□□ -1.39
CDCA3-201ENST00000229265 FAM229BQ4G0N7 80 aa6.39□□□□□ -1.39
CDCA3-201ENST00000229265 C9orf153Q5TBE3 101 aa6.38□□□□□ -1.39
CDCA3-201ENST00000229265 LOC100996750A0A140TA64 210 aa6.37□□□□□ -1.39
CDCA3-201ENST00000229265 NDUFB1O75438 58 aa6.37□□□□□ -1.39
CDCA3-201ENST00000229265 KRTAP4-6Q9BYQ5 205 aa6.37□□□□□ -1.39
CDCA3-201ENST00000229265 ASB16-AS1Q495Z4 193 aa6.36□□□□□ -1.39
CDCA3-201ENST00000229265 A8MWP4 228 aa6.35□□□□□ -1.39
CDCA3-201ENST00000229265 NDUFC1O43677 76 aa6.35□□□□□ -1.39
CDCA3-201ENST00000229265 IGLV9-49A0A0B4J1Y8 123 aa6.34□□□□□ -1.39
CDCA3-201ENST00000229265 KLKP1Q107X0 134 aa6.34□□□□□ -1.39
CDCA3-201ENST00000229265 Q5XG85 94 aa6.34□□□□□ -1.39
CDCA3-201ENST00000229265 PRR15Q8IV56 129 aa6.34□□□□□ -1.39
CDCA3-201ENST00000229265 HCG22E2RYF7 251 aa6.33□□□□□ -1.4
CDCA3-201ENST00000229265 OCR1Q9BZK8 76 aa6.33□□□□□ -1.4
CDCA3-201ENST00000229265 C5orf47Q569G3 176 aa6.32□□□□□ -1.4
CDCA3-201ENST00000229265 UBR4Q5T4S7 5183 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms