RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 KRTAP13-1Q8IUC0 172 aa11.87□□□□□ -0.51
YBX3-201ENST00000228251 HIGD2AQ9BW72 106 aa11.87□□□□□ -0.51
YBX3-201ENST00000228251 C9orf153Q5TBE3 101 aa11.87□□□□□ -0.51
YBX3-201ENST00000228251 LINC00476Q8WZB0 136 aa11.87□□□□□ -0.51
YBX3-201ENST00000228251 SRRM2Q9UQ35 2752 aaKnown RBP11.84□□□□□ -0.51
YBX3-201ENST00000228251 IGKV4-1P06312 121 aa11.83□□□□□ -0.52
YBX3-201ENST00000228251 SS18L2Q9UHA2 77 aa11.83□□□□□ -0.52
YBX3-201ENST00000228251 DNAH8Q96JB1 4490 aa11.83□□□□□ -0.52
YBX3-201ENST00000228251 IGFL1Q6UW32 110 aa11.82□□□□□ -0.52
YBX3-201ENST00000228251 F8WEM9 126 aa11.81□□□□□ -0.52
YBX3-201ENST00000228251 RTL8CO15255 209 aa11.81□□□□□ -0.52
YBX3-201ENST00000228251 TGP01266 2768 aa11.8□□□□□ -0.52
YBX3-201ENST00000228251 CYSTM1Q9H1C7 97 aa11.79□□□□□ -0.52
YBX3-201ENST00000228251 ALMS1Q8TCU4 4167 aa11.79□□□□□ -0.52
YBX3-201ENST00000228251 BPY2O14599 106 aa11.79□□□□□ -0.52
YBX3-201ENST00000228251 Q8N9L7 120 aa11.78□□□□□ -0.52
YBX3-201ENST00000228251 UBE2AP49459 152 aa11.77□□□□□ -0.52
YBX3-201ENST00000228251 A0A0G2JQZ4 141 aa11.77□□□□□ -0.53
YBX3-201ENST00000228251 TRAV7A0A075B6U4 112 aa11.76□□□□□ -0.53
YBX3-201ENST00000228251 DNAH11Q96DT5 4516 aa11.76□□□□□ -0.53
YBX3-201ENST00000228251 C1orf134Q5TEV5 83 aa11.75□□□□□ -0.53
YBX3-201ENST00000228251 SMIM20Q8N5G0 67 aa11.74□□□□□ -0.53
YBX3-201ENST00000228251 PLAC8Q9NZF1 115 aa11.74□□□□□ -0.53
YBX3-201ENST00000228251 FRAS1Q86XX4 4008 aa11.74□□□□□ -0.53
YBX3-201ENST00000228251 DPH3Q96FX2 82 aa11.73□□□□□ -0.53
YBX3-201ENST00000228251 DSCR10P59022 87 aa11.72□□□□□ -0.53
YBX3-201ENST00000228251 DNAH5Q8TE73 4624 aa11.71□□□□□ -0.54
YBX3-201ENST00000228251 LY6G6CO95867 125 aa11.68□□□□□ -0.54
YBX3-201ENST00000228251 IGLV5-52A0A0A0MRZ9 124 aa11.67□□□□□ -0.54
YBX3-201ENST00000228251 LINC00483Q53H64 154 aa11.66□□□□□ -0.54
YBX3-201ENST00000228251 PSORS1C2Q9UIG4 136 aa11.66□□□□□ -0.54
YBX3-201ENST00000228251 A0A087WSZ3 146 aa11.64□□□□□ -0.55
YBX3-201ENST00000228251 WWC2-AS2Q96NR7 200 aa11.64□□□□□ -0.55
YBX3-201ENST00000228251 OCR1Q9BZK8 76 aa11.64□□□□□ -0.55
YBX3-201ENST00000228251 C20orf197Q8N268 126 aa11.63□□□□□ -0.55
YBX3-201ENST00000228251 FAT2Q9NYQ8 4349 aa11.62□□□□□ -0.55
YBX3-201ENST00000228251 K7EQZ3 153 aa11.62□□□□□ -0.55
YBX3-201ENST00000228251 PKD1P98161 4303 aa11.61□□□□□ -0.55
YBX3-201ENST00000228251 KLKP1Q107X0 134 aa11.61□□□□□ -0.55
YBX3-201ENST00000228251 TMEM258P61165 79 aa11.6□□□□□ -0.55
YBX3-201ENST00000228251 HYDINQ4G0P3 5121 aa11.57□□□□□ -0.56
YBX3-201ENST00000228251 ZNF861PO60384 105 aa11.56□□□□□ -0.56
YBX3-201ENST00000228251 KRTAP10-2P60368 255 aa11.56□□□□□ -0.56
YBX3-201ENST00000228251 LINC00472Q9H8W2 130 aa11.56□□□□□ -0.56
YBX3-201ENST00000228251 ZNF706Q9Y5V0 76 aaPredicted RBP11.55□□□□□ -0.56
YBX3-201ENST00000228251 H7BZZ5 65 aa11.54□□□□□ -0.56
YBX3-201ENST00000228251 RPL37AP61513 92 aaKnown RBP11.54□□□□□ -0.56
YBX3-201ENST00000228251 DEFB116Q30KQ4 102 aa11.53□□□□□ -0.56
YBX3-201ENST00000228251 FAM30AQ9NZY2 134 aa11.51□□□□□ -0.57
YBX3-201ENST00000228251 LCE6AA0A183 80 aa11.51□□□□□ -0.57
YBX3-201ENST00000228251 SNURFQ9Y675 71 aa11.5□□□□□ -0.57
YBX3-201ENST00000228251 HCG22E2RYF7 251 aa11.49□□□□□ -0.57
YBX3-201ENST00000228251 IGLV9-49A0A0B4J1Y8 123 aa11.49□□□□□ -0.57
YBX3-201ENST00000228251 Q6ZSA8 131 aa11.49□□□□□ -0.57
YBX3-201ENST00000228251 TMEM254Q8TBM7 123 aa11.49□□□□□ -0.57
YBX3-201ENST00000228251 IGLV7-43P04211 117 aa11.48□□□□□ -0.57
YBX3-201ENST00000228251 CIRBP-AS1Q8TBR5 109 aa11.47□□□□□ -0.57
YBX3-201ENST00000228251 A0A0U1RQV1 116 aa11.46□□□□□ -0.58
YBX3-201ENST00000228251 KRTAP29-1A8MX34 341 aaPredicted RBP11.45□□□□□ -0.58
YBX3-201ENST00000228251 RPS28P62857 69 aaKnown RBP11.45□□□□□ -0.58
YBX3-201ENST00000228251 Q96NJ1 140 aa11.45□□□□□ -0.58
YBX3-201ENST00000228251 LRP1BQ9NZR2 4599 aa11.44□□□□□ -0.58
YBX3-201ENST00000228251 A8MWP4 228 aa11.44□□□□□ -0.58
YBX3-201ENST00000228251 PRR15Q8IV56 129 aa11.44□□□□□ -0.58
YBX3-201ENST00000228251 SACSQ9NZJ4 4579 aa11.44□□□□□ -0.58
YBX3-201ENST00000228251 ANAPC11Q9NYG5 84 aa11.43□□□□□ -0.58
YBX3-201ENST00000228251 NDUFC1O43677 76 aa11.42□□□□□ -0.58
YBX3-201ENST00000228251 KRTAP10-1P60331 282 aa11.42□□□□□ -0.58
YBX3-201ENST00000228251 MOBPQ13875 183 aa11.41□□□□□ -0.58
YBX3-201ENST00000228251 J3KT08 172 aa11.4□□□□□ -0.58
YBX3-201ENST00000228251 FAM236DA0A1B0GTK5 79 aa11.39□□□□□ -0.59
YBX3-201ENST00000228251 FAM236CP0DP71 79 aa11.39□□□□□ -0.59
YBX3-201ENST00000228251 WFDC13Q8IUB5 93 aa11.36□□□□□ -0.59
YBX3-201ENST00000228251 OXTP01178 125 aa11.35□□□□□ -0.59
YBX3-201ENST00000228251 ZCCHC13Q8WW36 166 aaKnown RBP11.35□□□□□ -0.59
YBX3-201ENST00000228251 MMP24-AS1A0A0U1RRL7 71 aa11.32□□□□□ -0.6
YBX3-201ENST00000228251 HRCT1Q6UXD1 115 aa11.32□□□□□ -0.6
YBX3-201ENST00000228251 CASC2Q6XLA1 102 aa11.32□□□□□ -0.6
YBX3-201ENST00000228251 ASB16-AS1Q495Z4 193 aa11.31□□□□□ -0.6
YBX3-201ENST00000228251 C5orf47Q569G3 176 aa11.31□□□□□ -0.6
YBX3-201ENST00000228251 ATP5EP56381 51 aaPredicted RBP11.26□□□□□ -0.61
YBX3-201ENST00000228251 CD164Q04900 197 aa11.26□□□□□ -0.61
YBX3-201ENST00000228251 NDUFB1O75438 58 aa11.26□□□□□ -0.61
YBX3-201ENST00000228251 VPS13BQ7Z7G8 4022 aa11.25□□□□□ -0.61
YBX3-201ENST00000228251 SSBP3-AS1Q7Z2R9 100 aa11.25□□□□□ -0.61
YBX3-201ENST00000228251 SERP1Q9Y6X1 66 aa11.25□□□□□ -0.61
YBX3-201ENST00000228251 PKHD1P08F94 4074 aa11.24□□□□□ -0.61
YBX3-201ENST00000228251 A0A1B0GVX0 72 aa11.21□□□□□ -0.61
YBX3-201ENST00000228251 hDV103S1A0JD37 113 aa11.21□□□□□ -0.62
YBX3-201ENST00000228251 C8orf17Q9NRJ1 99 aa11.21□□□□□ -0.62
YBX3-201ENST00000228251 A0A087X002 238 aa11.2□□□□□ -0.62
YBX3-201ENST00000228251 KRTAP13-2Q52LG2 175 aa11.2□□□□□ -0.62
YBX3-201ENST00000228251 FAM229BQ4G0N7 80 aa11.19□□□□□ -0.62
YBX3-201ENST00000228251 DYNC1H1Q14204 4646 aaKnown RBP11.18□□□□□ -0.62
YBX3-201ENST00000228251 KRTAP1-4P0C5Y4 121 aa11.18□□□□□ -0.62
YBX3-201ENST00000228251 MP68P56378 58 aa11.15□□□□□ -0.62
YBX3-201ENST00000228251 H3BPC8 53 aa11.14□□□□□ -0.63
YBX3-201ENST00000228251 H0Y9P7 68 aa11.13□□□□□ -0.63
YBX3-201ENST00000228251 IGHV6-1A0A0B4J1U7 121 aa11.13□□□□□ -0.63
YBX3-201ENST00000228251 TRAV22A0A0B4J277 110 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms