RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 PMAIP1Q13794 54 aa6.2□□□□□ -1.42
TUBB1-201ENST00000217133 MRPL55Q7Z7F7 128 aaKnown RBP6.2□□□□□ -1.42
TUBB1-201ENST00000217133 CYP4F30PQ9H0H9 118 aa6.2□□□□□ -1.42
TUBB1-201ENST00000217133 PLA2G2DQ9UNK4 145 aa6.2□□□□□ -1.42
TUBB1-201ENST00000217133 A0A087WSZ3 146 aa6.19□□□□□ -1.42
TUBB1-201ENST00000217133 A8MUN3 132 aa6.19□□□□□ -1.42
TUBB1-201ENST00000217133 TLX1NBP0CAT3 122 aa6.19□□□□□ -1.42
TUBB1-201ENST00000217133 SPRR1AP35321 89 aa6.19□□□□□ -1.42
TUBB1-201ENST00000217133 REG3GQ6UW15 175 aa6.18□□□□□ -1.42
TUBB1-201ENST00000217133 B9D2Q9BPU9 175 aa6.18□□□□□ -1.42
TUBB1-201ENST00000217133 MEGF8Q7Z7M0 2845 aa6.17□□□□□ -1.42
TUBB1-201ENST00000217133 IGLV5-37A0A075B6J1 123 aa6.17□□□□□ -1.42
TUBB1-201ENST00000217133 IGFL1Q6UW32 110 aa6.17□□□□□ -1.42
TUBB1-201ENST00000217133 STAB2Q8WWQ8 2551 aa6.17□□□□□ -1.42
TUBB1-201ENST00000217133 RPL37AP61513 92 aaKnown RBP6.16□□□□□ -1.42
TUBB1-201ENST00000217133 C11orf45Q8TAV5 145 aa6.16□□□□□ -1.42
TUBB1-201ENST00000217133 CASC10Q5T4H9 136 aa6.16□□□□□ -1.42
TUBB1-201ENST00000217133 COL7A1Q02388 2944 aa6.15□□□□□ -1.42
TUBB1-201ENST00000217133 H0Y9P7 68 aa6.15□□□□□ -1.42
TUBB1-201ENST00000217133 PRLHP81277 87 aa6.15□□□□□ -1.43
TUBB1-201ENST00000217133 DNAH10OSP0CZ25 163 aa6.15□□□□□ -1.43
TUBB1-201ENST00000217133 CHKB-CPT1BH3BT56 60 aa6.14□□□□□ -1.43
TUBB1-201ENST00000217133 CASC2Q6XLA1 102 aa6.14□□□□□ -1.43
TUBB1-201ENST00000217133 TGP01266 2768 aa6.14□□□□□ -1.43
TUBB1-201ENST00000217133 KRTAP7-1Q8IUC3 87 aa6.14□□□□□ -1.43
TUBB1-201ENST00000217133 UBE2AP49459 152 aa6.13□□□□□ -1.43
TUBB1-201ENST00000217133 IGKV2-24A0A0C4DH68 120 aa6.13□□□□□ -1.43
TUBB1-201ENST00000217133 K7EIL1 84 aa6.13□□□□□ -1.43
TUBB1-201ENST00000217133 PRR15LQ9BU68 103 aa6.12□□□□□ -1.43
TUBB1-201ENST00000217133 Q5VV11 94 aa6.1□□□□□ -1.43
TUBB1-201ENST00000217133 LIMD2Q9BT23 127 aa6.1□□□□□ -1.43
TUBB1-201ENST00000217133 SPTSSBQ8NFR3 76 aa6.1□□□□□ -1.43
TUBB1-201ENST00000217133 H3BPC8 53 aa6.09□□□□□ -1.43
TUBB1-201ENST00000217133 SPANXA2-OT1Q8N9U9 137 aa6.09□□□□□ -1.43
TUBB1-201ENST00000217133 H0Y9J4 135 aa6.09□□□□□ -1.43
TUBB1-201ENST00000217133 LINC00588Q9Y4M8 146 aa6.09□□□□□ -1.43
TUBB1-201ENST00000217133 FBN3Q75N90 2809 aa6.09□□□□□ -1.44
TUBB1-201ENST00000217133 A0A096LNI7 61 aa6.08□□□□□ -1.44
TUBB1-201ENST00000217133 A8MU10 97 aa6.08□□□□□ -1.44
TUBB1-201ENST00000217133 TENM2Q9NT68 2774 aa6.08□□□□□ -1.44
TUBB1-201ENST00000217133 KRTAP29-1A8MX34 341 aaPredicted RBP6.08□□□□□ -1.44
TUBB1-201ENST00000217133 Q8N9P0 234 aaPredicted RBP6.08□□□□□ -1.44
TUBB1-201ENST00000217133 PRKDCP78527 4128 aaKnown RBP6.08□□□□□ -1.44
TUBB1-201ENST00000217133 DNAH3Q8TD57 4116 aa6.07□□□□□ -1.44
TUBB1-201ENST00000217133 A6NED7 52 aa6.06□□□□□ -1.44
TUBB1-201ENST00000217133 IGLV8-61A0A075B6I0 122 aa6.06□□□□□ -1.44
TUBB1-201ENST00000217133 A8MWP4 228 aa6.06□□□□□ -1.44
TUBB1-201ENST00000217133 CNBPP62633 177 aaKnown RBP6.06□□□□□ -1.44
TUBB1-201ENST00000217133 HUWE1Q7Z6Z7 4374 aaKnown RBP6.04□□□□□ -1.44
TUBB1-201ENST00000217133 PCOTHQ58A44 107 aa6.04□□□□□ -1.44
TUBB1-201ENST00000217133 COA5Q86WW8 74 aa6.04□□□□□ -1.44
TUBB1-201ENST00000217133 C16orf90A8MZG2 172 aa6.03□□□□□ -1.44
TUBB1-201ENST00000217133 LINC00472Q9H8W2 130 aa6.02□□□□□ -1.45
TUBB1-201ENST00000217133 C9orf163Q8N9P6 203 aa6.01□□□□□ -1.45
TUBB1-201ENST00000217133 CD164Q04900 197 aa6.01□□□□□ -1.45
TUBB1-201ENST00000217133 PHF5AQ7RTV0 110 aaKnown RBP6.01□□□□□ -1.45
TUBB1-201ENST00000217133 DNAH9Q9NYC9 4486 aa6.01□□□□□ -1.45
TUBB1-201ENST00000217133 NDUFS5O43920 106 aa6□□□□□ -1.45
TUBB1-201ENST00000217133 CHTF8P0CG12 524 aa5.99□□□□□ -1.45
TUBB1-201ENST00000217133 IGLV7-46A0A075B6I9 117 aa5.99□□□□□ -1.45
TUBB1-201ENST00000217133 Q75L30 129 aa5.99□□□□□ -1.45
TUBB1-201ENST00000217133 MMP24-AS1A0A0U1RRL7 71 aa5.98□□□□□ -1.45
TUBB1-201ENST00000217133 ATP11AUNQ6ZP68 121 aa5.98□□□□□ -1.45
TUBB1-201ENST00000217133 KTN1-AS1Q86SY8 53 aa5.98□□□□□ -1.45
TUBB1-201ENST00000217133 CSMD3Q7Z407 3707 aa5.98□□□□□ -1.45
TUBB1-201ENST00000217133 SPAG11AQ6PDA7 123 aa5.98□□□□□ -1.45
TUBB1-201ENST00000217133 LCA10Q71F78 164 aa5.97□□□□□ -1.45
TUBB1-201ENST00000217133 LOC101927531A0A1B0GV80 90 aa5.97□□□□□ -1.45
TUBB1-201ENST00000217133 KRTAP21-3Q3LHN1 58 aa5.97□□□□□ -1.45
TUBB1-201ENST00000217133 SPRR1BP22528 89 aa5.96□□□□□ -1.45
TUBB1-201ENST00000217133 LYSTQ99698 3801 aa5.96□□□□□ -1.46
TUBB1-201ENST00000217133 IGLV9-49A0A0B4J1Y8 123 aa5.95□□□□□ -1.46
TUBB1-201ENST00000217133 KRTAP11-1Q8IUC1 163 aa5.95□□□□□ -1.46
TUBB1-201ENST00000217133 TP53AIP1Q9HCN2 124 aa5.95□□□□□ -1.46
TUBB1-201ENST00000217133 CDK2AP2O75956 126 aa5.95□□□□□ -1.46
TUBB1-201ENST00000217133 UBE2DNLQ8IWF7 75 aa5.95□□□□□ -1.46
TUBB1-201ENST00000217133 CDC42SE1Q9NRR8 79 aa5.94□□□□□ -1.46
TUBB1-201ENST00000217133 IGHV6-1A0A0B4J1U7 121 aa5.93□□□□□ -1.46
TUBB1-201ENST00000217133 MOBPQ13875 183 aa5.93□□□□□ -1.46
TUBB1-201ENST00000217133 C14orf177Q52M58 125 aa5.93□□□□□ -1.46
TUBB1-201ENST00000217133 SRRM2Q9UQ35 2752 aaKnown RBP5.92□□□□□ -1.46
TUBB1-201ENST00000217133 C8orf17Q9NRJ1 99 aa5.92□□□□□ -1.46
TUBB1-201ENST00000217133 KRTAP1-5Q9BYS1 174 aa5.92□□□□□ -1.46
TUBB1-201ENST00000217133 RBM12B-AS1Q9P1G2 102 aa5.91□□□□□ -1.46
TUBB1-201ENST00000217133 LINC01558Q9Y6Z2 57 aa5.91□□□□□ -1.46
TUBB1-201ENST00000217133 A6NN06 94 aa5.89□□□□□ -1.47
TUBB1-201ENST00000217133 HRES1P13985 223 aa5.88□□□□□ -1.47
TUBB1-201ENST00000217133 A0A1B0GVX0 72 aa5.87□□□□□ -1.47
TUBB1-201ENST00000217133 Q6ZR54 194 aa5.87□□□□□ -1.47
TUBB1-201ENST00000217133 STARD9Q9P2P6 4700 aa5.87□□□□□ -1.47
TUBB1-201ENST00000217133 SPINK7P58062 85 aa5.87□□□□□ -1.47
TUBB1-201ENST00000217133 MRPL34Q9BQ48 92 aaKnown RBP5.87□□□□□ -1.47
TUBB1-201ENST00000217133 C7orf65Q6ZTY9 151 aa5.86□□□□□ -1.47
TUBB1-201ENST00000217133 Q96NJ1 140 aa5.86□□□□□ -1.47
TUBB1-201ENST00000217133 PLECQ15149 4684 aaKnown RBP5.86□□□□□ -1.47
TUBB1-201ENST00000217133 DNAH7Q8WXX0 4024 aa5.84□□□□□ -1.47
TUBB1-201ENST00000217133 ASB16-AS1Q495Z4 193 aa5.84□□□□□ -1.47
TUBB1-201ENST00000217133 PRR26Q8N8Z3 221 aa5.84□□□□□ -1.47
TUBB1-201ENST00000217133 SPINK6Q6UWN8 80 aa5.83□□□□□ -1.48
TUBB1-201ENST00000217133 PLAC8Q9NZF1 115 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms