RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 KCNQ1DNQ9H478 68 aa6.81□□□□□ -1.32
APOBEC3D-201ENST00000216099 STAB2Q8WWQ8 2551 aa6.8□□□□□ -1.32
APOBEC3D-201ENST00000216099 C7orf33Q8WU49 177 aa6.8□□□□□ -1.32
APOBEC3D-201ENST00000216099 CNBPP62633 177 aaKnown RBP6.79□□□□□ -1.32
APOBEC3D-201ENST00000216099 Q6ZQY7 126 aa6.79□□□□□ -1.32
APOBEC3D-201ENST00000216099 F8WEM9 126 aa6.78□□□□□ -1.32
APOBEC3D-201ENST00000216099 C14orf177Q52M58 125 aa6.78□□□□□ -1.32
APOBEC3D-201ENST00000216099 SNURFQ9Y675 71 aa6.78□□□□□ -1.32
APOBEC3D-201ENST00000216099 LOC110117498A0A087WWA1 95 aa6.77□□□□□ -1.33
APOBEC3D-201ENST00000216099 FUSP35637 526 aaKnown RBP eCLIP6.77□□□□□ -1.33
APOBEC3D-201ENST00000216099 UBE2BP63146 152 aa6.77□□□□□ -1.33
APOBEC3D-201ENST00000216099 IGLV1-50A0A075B6I6 118 aa6.75□□□□□ -1.33
APOBEC3D-201ENST00000216099 PSCAO43653 123 aa6.75□□□□□ -1.33
APOBEC3D-201ENST00000216099 PDE6GP18545 87 aa6.75□□□□□ -1.33
APOBEC3D-201ENST00000216099 SPRR1AP35321 89 aa6.75□□□□□ -1.33
APOBEC3D-201ENST00000216099 C7orf65Q6ZTY9 151 aa6.75□□□□□ -1.33
APOBEC3D-201ENST00000216099 NDUFC1O43677 76 aa6.75□□□□□ -1.33
APOBEC3D-201ENST00000216099 KRTAP7-1Q8IUC3 87 aa6.75□□□□□ -1.33
APOBEC3D-201ENST00000216099 KRTAP4-16G5E9R7 235 aaPredicted RBP6.74□□□□□ -1.33
APOBEC3D-201ENST00000216099 Q6ZQT0 140 aa6.74□□□□□ -1.33
APOBEC3D-201ENST00000216099 NBDYA0A0U1RRE5 68 aa6.74□□□□□ -1.33
APOBEC3D-201ENST00000216099 FAM168BA1KXE4 195 aa6.74□□□□□ -1.33
APOBEC3D-201ENST00000216099 A0A087X002 238 aa6.73□□□□□ -1.33
APOBEC3D-201ENST00000216099 A6NN06 94 aa6.73□□□□□ -1.33
APOBEC3D-201ENST00000216099 C16orf90A8MZG2 172 aa6.73□□□□□ -1.33
APOBEC3D-201ENST00000216099 Q1T7F1 81 aa6.73□□□□□ -1.33
APOBEC3D-201ENST00000216099 NOTCH2NLQ7Z3S9 236 aa6.73□□□□□ -1.33
APOBEC3D-201ENST00000216099 A8MU10 97 aa6.72□□□□□ -1.33
APOBEC3D-201ENST00000216099 Q6ZRX8 168 aa6.72□□□□□ -1.33
APOBEC3D-201ENST00000216099 KRTAP16-1A8MUX0 517 aa6.72□□□□□ -1.33
APOBEC3D-201ENST00000216099 HAMPP81172 84 aa6.72□□□□□ -1.33
APOBEC3D-201ENST00000216099 Q8NBF4 154 aa6.71□□□□□ -1.34
APOBEC3D-201ENST00000216099 TRBV7-4A0A0J9YYF1 115 aa6.71□□□□□ -1.34
APOBEC3D-201ENST00000216099 A0A096LNI7 61 aa6.7□□□□□ -1.34
APOBEC3D-201ENST00000216099 ETDCA0A1B0GVM5 59 aa6.7□□□□□ -1.34
APOBEC3D-201ENST00000216099 LRCOL1A6NCL2 159 aa6.7□□□□□ -1.34
APOBEC3D-201ENST00000216099 Q6ZRN7 208 aaPredicted RBP6.7□□□□□ -1.34
APOBEC3D-201ENST00000216099 LINC01554Q52M75 96 aa6.69□□□□□ -1.34
APOBEC3D-201ENST00000216099 Q9BRP9 147 aa6.68□□□□□ -1.34
APOBEC3D-201ENST00000216099 DNAH7Q8WXX0 4024 aa6.67□□□□□ -1.34
APOBEC3D-201ENST00000216099 C9orf163Q8N9P6 203 aa6.67□□□□□ -1.34
APOBEC3D-201ENST00000216099 PRR4Q16378 134 aa6.67□□□□□ -1.34
APOBEC3D-201ENST00000216099 ATP11AUNQ6ZP68 121 aa6.67□□□□□ -1.34
APOBEC3D-201ENST00000216099 IGLV5-48A0A075B6I7 105 aa6.66□□□□□ -1.34
APOBEC3D-201ENST00000216099 UBE2AP49459 152 aa6.66□□□□□ -1.34
APOBEC3D-201ENST00000216099 KRTAP3-1Q9BYR8 98 aa6.66□□□□□ -1.34
APOBEC3D-201ENST00000216099 VPS13DQ5THJ4 4388 aa6.66□□□□□ -1.34
APOBEC3D-201ENST00000216099 M0R2N4 97 aa6.66□□□□□ -1.34
APOBEC3D-201ENST00000216099 Q8N377 158 aa6.66□□□□□ -1.34
APOBEC3D-201ENST00000216099 CSMD3Q7Z407 3707 aa6.65□□□□□ -1.34
APOBEC3D-201ENST00000216099 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.65□□□□□ -1.34
APOBEC3D-201ENST00000216099 A0A1W2PNN7 141 aa6.65□□□□□ -1.34
APOBEC3D-201ENST00000216099 TMEM254Q8TBM7 123 aa6.65□□□□□ -1.34
APOBEC3D-201ENST00000216099 NREPQ16612 68 aa6.65□□□□□ -1.35
APOBEC3D-201ENST00000216099 KRTAP21-3Q3LHN1 58 aa6.65□□□□□ -1.35
APOBEC3D-201ENST00000216099 IGKV2-24A0A0C4DH68 120 aa6.64□□□□□ -1.35
APOBEC3D-201ENST00000216099 SPTSSBQ8NFR3 76 aa6.64□□□□□ -1.35
APOBEC3D-201ENST00000216099 C8orf17Q9NRJ1 99 aa6.64□□□□□ -1.35
APOBEC3D-201ENST00000216099 ERC2-IT1O76042 136 aa6.63□□□□□ -1.35
APOBEC3D-201ENST00000216099 PLECQ15149 4684 aaKnown RBP6.63□□□□□ -1.35
APOBEC3D-201ENST00000216099 PRKDCP78527 4128 aaKnown RBP6.62□□□□□ -1.35
APOBEC3D-201ENST00000216099 Q6ZR54 194 aa6.62□□□□□ -1.35
APOBEC3D-201ENST00000216099 DNAH10Q8IVF4 4471 aa6.62□□□□□ -1.35
APOBEC3D-201ENST00000216099 TRAV22A0A0B4J277 110 aa6.61□□□□□ -1.35
APOBEC3D-201ENST00000216099 IGLV8-61A0A075B6I0 122 aa6.61□□□□□ -1.35
APOBEC3D-201ENST00000216099 A0A1B0GW54 56 aa6.61□□□□□ -1.35
APOBEC3D-201ENST00000216099 BPY2O14599 106 aa6.61□□□□□ -1.35
APOBEC3D-201ENST00000216099 SCXQ7RTU7 201 aa6.61□□□□□ -1.35
APOBEC3D-201ENST00000216099 SMIM29Q86T20 159 aa6.61□□□□□ -1.35
APOBEC3D-201ENST00000216099 DEFB105AQ8NG35 78 aa6.61□□□□□ -1.35
APOBEC3D-201ENST00000216099 MEGF8Q7Z7M0 2845 aa6.6□□□□□ -1.35
APOBEC3D-201ENST00000216099 LYSTQ99698 3801 aa6.6□□□□□ -1.35
APOBEC3D-201ENST00000216099 TENM2Q9NT68 2774 aa6.6□□□□□ -1.35
APOBEC3D-201ENST00000216099 A0A087WTM6 91 aa6.59□□□□□ -1.35
APOBEC3D-201ENST00000216099 ST20-AS1Q8NBB2 130 aa6.59□□□□□ -1.35
APOBEC3D-201ENST00000216099 hDV103S1A0JD37 113 aa6.57□□□□□ -1.36
APOBEC3D-201ENST00000216099 STARD9Q9P2P6 4700 aa6.57□□□□□ -1.36
APOBEC3D-201ENST00000216099 LUZP6Q538Z0 58 aa6.56□□□□□ -1.36
APOBEC3D-201ENST00000216099 SPACA4Q8TDM5 124 aa6.56□□□□□ -1.36
APOBEC3D-201ENST00000216099 HCG22E2RYF7 251 aa6.56□□□□□ -1.36
APOBEC3D-201ENST00000216099 DNAH6Q9C0G6 4158 aa6.55□□□□□ -1.36
APOBEC3D-201ENST00000216099 PRLHP81277 87 aa6.55□□□□□ -1.36
APOBEC3D-201ENST00000216099 C1orf137Q5JT78 98 aa6.55□□□□□ -1.36
APOBEC3D-201ENST00000216099 KRTAP11-1Q8IUC1 163 aa6.55□□□□□ -1.36
APOBEC3D-201ENST00000216099 Q5VV11 94 aa6.54□□□□□ -1.36
APOBEC3D-201ENST00000216099 SPRR1BP22528 89 aa6.54□□□□□ -1.36
APOBEC3D-201ENST00000216099 PANO1I0J062 215 aa6.53□□□□□ -1.36
APOBEC3D-201ENST00000216099 Q8N1X5 172 aa6.53□□□□□ -1.36
APOBEC3D-201ENST00000216099 SPRR4Q96PI1 79 aa6.53□□□□□ -1.36
APOBEC3D-201ENST00000216099 A0A1W2PNM2 257 aa6.53□□□□□ -1.36
APOBEC3D-201ENST00000216099 RTL8CO15255 209 aa6.53□□□□□ -1.36
APOBEC3D-201ENST00000216099 C1orf134Q5TEV5 83 aa6.53□□□□□ -1.36
APOBEC3D-201ENST00000216099 HIGD2AQ9BW72 106 aa6.53□□□□□ -1.36
APOBEC3D-201ENST00000216099 IGKV4-1P06312 121 aa6.52□□□□□ -1.37
APOBEC3D-201ENST00000216099 KRTAP13-1Q8IUC0 172 aa6.52□□□□□ -1.37
APOBEC3D-201ENST00000216099 Q8N9L7 120 aa6.52□□□□□ -1.37
APOBEC3D-201ENST00000216099 A6NED7 52 aa6.51□□□□□ -1.37
APOBEC3D-201ENST00000216099 DNAH17Q9UFH2 4485 aa6.5□□□□□ -1.37
APOBEC3D-201ENST00000216099 CHKB-CPT1BH3BT56 60 aa6.49□□□□□ -1.37
APOBEC3D-201ENST00000216099 PLAC8Q9NZF1 115 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms