RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 LRCOL1A6NCL2 159 aa8.34□□□□□ -1.07
CTNS-201ENST00000046640 DHRS4-AS1Q9P1J3 65 aa8.33□□□□□ -1.08
CTNS-201ENST00000046640 IGLV5-48A0A075B6I7 105 aa8.33□□□□□ -1.08
CTNS-201ENST00000046640 REG3GQ6UW15 175 aa8.32□□□□□ -1.08
CTNS-201ENST00000046640 SPRR1AP35321 89 aa8.32□□□□□ -1.08
CTNS-201ENST00000046640 IGLV5-37A0A075B6J1 123 aa8.31□□□□□ -1.08
CTNS-201ENST00000046640 K7EQZ3 153 aa8.31□□□□□ -1.08
CTNS-201ENST00000046640 PRR4Q16378 134 aa8.3□□□□□ -1.08
CTNS-201ENST00000046640 PHF5AQ7RTV0 110 aaKnown RBP8.28□□□□□ -1.08
CTNS-201ENST00000046640 KRTAP11-1Q8IUC1 163 aa8.28□□□□□ -1.08
CTNS-201ENST00000046640 Q8NBF4 154 aa8.28□□□□□ -1.08
CTNS-201ENST00000046640 PLECQ15149 4684 aaKnown RBP8.28□□□□□ -1.08
CTNS-201ENST00000046640 C16orf90A8MZG2 172 aa8.28□□□□□ -1.08
CTNS-201ENST00000046640 B9D2Q9BPU9 175 aa8.28□□□□□ -1.08
CTNS-201ENST00000046640 DSCR10P59022 87 aa8.27□□□□□ -1.09
CTNS-201ENST00000046640 LINC00476Q8WZB0 136 aa8.26□□□□□ -1.09
CTNS-201ENST00000046640 TNP2Q05952 138 aa8.25□□□□□ -1.09
CTNS-201ENST00000046640 WFDC13Q8IUB5 93 aa8.25□□□□□ -1.09
CTNS-201ENST00000046640 CNBPP62633 177 aaKnown RBP8.24□□□□□ -1.09
CTNS-201ENST00000046640 RPL37AP61513 92 aaKnown RBP8.24□□□□□ -1.09
CTNS-201ENST00000046640 C1orf195Q5TG92 126 aa8.24□□□□□ -1.09
CTNS-201ENST00000046640 PANO1I0J062 215 aa8.23□□□□□ -1.09
CTNS-201ENST00000046640 NBDYA0A0U1RRE5 68 aa8.23□□□□□ -1.09
CTNS-201ENST00000046640 A0A087WSZ3 146 aa8.21□□□□□ -1.09
CTNS-201ENST00000046640 IGFL1Q6UW32 110 aa8.21□□□□□ -1.1
CTNS-201ENST00000046640 MEGF8Q7Z7M0 2845 aa8.2□□□□□ -1.1
CTNS-201ENST00000046640 SPRR4Q96PI1 79 aa8.2□□□□□ -1.1
CTNS-201ENST00000046640 PRKDCP78527 4128 aaKnown RBP8.2□□□□□ -1.1
CTNS-201ENST00000046640 TGP01266 2768 aa8.2□□□□□ -1.1
CTNS-201ENST00000046640 STARD9Q9P2P6 4700 aa8.19□□□□□ -1.1
CTNS-201ENST00000046640 HCG22E2RYF7 251 aa8.18□□□□□ -1.1
CTNS-201ENST00000046640 DNHD1Q96M86 4753 aa8.18□□□□□ -1.1
CTNS-201ENST00000046640 C14orf177Q52M58 125 aa8.18□□□□□ -1.1
CTNS-201ENST00000046640 C9orf163Q8N9P6 203 aa8.18□□□□□ -1.1
CTNS-201ENST00000046640 V9GYY9 64 aa8.17□□□□□ -1.1
CTNS-201ENST00000046640 NUPR2A6NF83 97 aa8.17□□□□□ -1.1
CTNS-201ENST00000046640 hDV103S1A0JD37 113 aa8.16□□□□□ -1.1
CTNS-201ENST00000046640 UBE2AP49459 152 aa8.16□□□□□ -1.1
CTNS-201ENST00000046640 C1orf64Q8NEQ6 169 aa8.16□□□□□ -1.1
CTNS-201ENST00000046640 Q6ZRN7 208 aaPredicted RBP8.15□□□□□ -1.11
CTNS-201ENST00000046640 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.14□□□□□ -1.11
CTNS-201ENST00000046640 A0A1B0GW54 56 aa8.12□□□□□ -1.11
CTNS-201ENST00000046640 LINC00208Q96KT6 92 aa8.12□□□□□ -1.11
CTNS-201ENST00000046640 PSPHP1O15172 72 aa8.12□□□□□ -1.11
CTNS-201ENST00000046640 SEC61GP60059 68 aa8.11□□□□□ -1.11
CTNS-201ENST00000046640 KMT2AQ03164 3969 aa8.11□□□□□ -1.11
CTNS-201ENST00000046640 DYNC2H1Q8NCM8 4307 aaKnown RBP8.11□□□□□ -1.11
CTNS-201ENST00000046640 LCE6AA0A183 80 aa8.11□□□□□ -1.11
CTNS-201ENST00000046640 ZCCHC13Q8WW36 166 aaKnown RBP8.09□□□□□ -1.11
CTNS-201ENST00000046640 Q1T7F1 81 aa8.08□□□□□ -1.12
CTNS-201ENST00000046640 A0A087WTM6 91 aa8.07□□□□□ -1.12
CTNS-201ENST00000046640 MP68P56378 58 aa8.07□□□□□ -1.12
CTNS-201ENST00000046640 IGLV9-49A0A0B4J1Y8 123 aa8.06□□□□□ -1.12
CTNS-201ENST00000046640 H0Y9J4 135 aa8.06□□□□□ -1.12
CTNS-201ENST00000046640 PRR15Q8IV56 129 aa8.06□□□□□ -1.12
CTNS-201ENST00000046640 CASC2Q6XLA1 102 aa8.05□□□□□ -1.12
CTNS-201ENST00000046640 TRAV22A0A0B4J277 110 aa8.05□□□□□ -1.12
CTNS-201ENST00000046640 H0Y9P7 68 aa8.04□□□□□ -1.12
CTNS-201ENST00000046640 RTL8CO15255 209 aa8.04□□□□□ -1.12
CTNS-201ENST00000046640 SPACA4Q8TDM5 124 aa8.04□□□□□ -1.12
CTNS-201ENST00000046640 ANAPC11Q9NYG5 84 aa8.04□□□□□ -1.12
CTNS-201ENST00000046640 VPS13DQ5THJ4 4388 aa8.03□□□□□ -1.12
CTNS-201ENST00000046640 PMAIP1Q13794 54 aa8.02□□□□□ -1.13
CTNS-201ENST00000046640 DNAH2Q9P225 4427 aa8.02□□□□□ -1.13
CTNS-201ENST00000046640 LY6G6CO95867 125 aa8.02□□□□□ -1.13
CTNS-201ENST00000046640 IGLV8-61A0A075B6I0 122 aa8.01□□□□□ -1.13
CTNS-201ENST00000046640 FBN3Q75N90 2809 aa8.01□□□□□ -1.13
CTNS-201ENST00000046640 A8MUN3 132 aa8□□□□□ -1.13
CTNS-201ENST00000046640 CYP4F30PQ9H0H9 118 aa8□□□□□ -1.13
CTNS-201ENST00000046640 A8MU10 97 aa7.99□□□□□ -1.13
CTNS-201ENST00000046640 KRTAP29-1A8MX34 341 aaPredicted RBP7.99□□□□□ -1.13
CTNS-201ENST00000046640 KRTAP13-1Q8IUC0 172 aa7.99□□□□□ -1.13
CTNS-201ENST00000046640 FRAS1Q86XX4 4008 aa7.99□□□□□ -1.13
CTNS-201ENST00000046640 PSORS1C2Q9UIG4 136 aa7.98□□□□□ -1.13
CTNS-201ENST00000046640 SPRR1BP22528 89 aa7.98□□□□□ -1.13
CTNS-201ENST00000046640 IGLV5-52A0A0A0MRZ9 124 aa7.97□□□□□ -1.13
CTNS-201ENST00000046640 NDUFB1O75438 58 aa7.97□□□□□ -1.13
CTNS-201ENST00000046640 A8MWP4 228 aa7.96□□□□□ -1.13
CTNS-201ENST00000046640 Q6ZR54 194 aa7.96□□□□□ -1.13
CTNS-201ENST00000046640 LINC00472Q9H8W2 130 aa7.96□□□□□ -1.13
CTNS-201ENST00000046640 HECTD4Q9Y4D8 3996 aa7.96□□□□□ -1.13
CTNS-201ENST00000046640 PCOTHQ58A44 107 aa7.96□□□□□ -1.14
CTNS-201ENST00000046640 C1orf134Q5TEV5 83 aa7.95□□□□□ -1.14
CTNS-201ENST00000046640 NDUFS5O43920 106 aa7.92□□□□□ -1.14
CTNS-201ENST00000046640 MOBPQ13875 183 aa7.92□□□□□ -1.14
CTNS-201ENST00000046640 Q5VV11 94 aa7.92□□□□□ -1.14
CTNS-201ENST00000046640 MMP24-AS1A0A0U1RRL7 71 aa7.9□□□□□ -1.15
CTNS-201ENST00000046640 DNAH8Q96JB1 4490 aa7.9□□□□□ -1.15
CTNS-201ENST00000046640 DNAH17Q9UFH2 4485 aa7.89□□□□□ -1.15
CTNS-201ENST00000046640 DNAH6Q9C0G6 4158 aa7.89□□□□□ -1.15
CTNS-201ENST00000046640 IGHV6-1A0A0B4J1U7 121 aa7.89□□□□□ -1.15
CTNS-201ENST00000046640 CHKB-CPT1BH3BT56 60 aa7.88□□□□□ -1.15
CTNS-201ENST00000046640 PLAC8Q9NZF1 115 aa7.88□□□□□ -1.15
CTNS-201ENST00000046640 KRTAP10-2P60368 255 aa7.88□□□□□ -1.15
CTNS-201ENST00000046640 Q8N9P0 234 aaPredicted RBP7.87□□□□□ -1.15
CTNS-201ENST00000046640 PRR15LQ9BU68 103 aa7.87□□□□□ -1.15
CTNS-201ENST00000046640 ZNF861PO60384 105 aa7.87□□□□□ -1.15
CTNS-201ENST00000046640 WWC2-AS2Q96NR7 200 aa7.86□□□□□ -1.15
CTNS-201ENST00000046640 COA5Q86WW8 74 aa7.84□□□□□ -1.15
CTNS-201ENST00000046640 LINC00483Q53H64 154 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 147.6 ms