RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 PHF5AQ7RTV0 110 aaKnown RBP13.81□□□□□ -0.2
HOXC8-201ENST00000040584 FAM30AQ9NZY2 134 aa13.81□□□□□ -0.2
HOXC8-201ENST00000040584 EPM2AB3EWF7 344 aa13.8□□□□□ -0.2
HOXC8-201ENST00000040584 PKHD1P08F94 4074 aa13.8□□□□□ -0.2
HOXC8-201ENST00000040584 TMEM258P61165 79 aa13.8□□□□□ -0.2
HOXC8-201ENST00000040584 DNAH8Q96JB1 4490 aa13.78□□□□□ -0.2
HOXC8-201ENST00000040584 SPRR1AP35321 89 aa13.77□□□□□ -0.21
HOXC8-201ENST00000040584 Q6ZRX8 168 aa13.77□□□□□ -0.21
HOXC8-201ENST00000040584 TRAV7A0A075B6U4 112 aa13.76□□□□□ -0.21
HOXC8-201ENST00000040584 PLAC8Q9NZF1 115 aa13.76□□□□□ -0.21
HOXC8-201ENST00000040584 IGLV5-48A0A075B6I7 105 aa13.75□□□□□ -0.21
HOXC8-201ENST00000040584 ETDCA0A1B0GVM5 59 aa13.75□□□□□ -0.21
HOXC8-201ENST00000040584 RPS28P62857 69 aaKnown RBP13.75□□□□□ -0.21
HOXC8-201ENST00000040584 KRTAP4-16G5E9R7 235 aaPredicted RBP13.74□□□□□ -0.21
HOXC8-201ENST00000040584 Q6ZSA8 131 aa13.74□□□□□ -0.21
HOXC8-201ENST00000040584 Q8N377 158 aa13.74□□□□□ -0.21
HOXC8-201ENST00000040584 UBE2BP63146 152 aa13.73□□□□□ -0.21
HOXC8-201ENST00000040584 KRTAP11-1Q8IUC1 163 aa13.73□□□□□ -0.21
HOXC8-201ENST00000040584 NREPQ16612 68 aa13.71□□□□□ -0.21
HOXC8-201ENST00000040584 CIRBP-AS1Q8TBR5 109 aa13.71□□□□□ -0.21
HOXC8-201ENST00000040584 LRP1BQ9NZR2 4599 aa13.7□□□□□ -0.22
HOXC8-201ENST00000040584 J3KT08 172 aa13.7□□□□□ -0.22
HOXC8-201ENST00000040584 DEFB105AQ8NG35 78 aa13.69□□□□□ -0.22
HOXC8-201ENST00000040584 REG3GQ6UW15 175 aa13.68□□□□□ -0.22
HOXC8-201ENST00000040584 SCXQ7RTU7 201 aa13.68□□□□□ -0.22
HOXC8-201ENST00000040584 DYNC1H1Q14204 4646 aaKnown RBP13.68□□□□□ -0.22
HOXC8-201ENST00000040584 Q9BRP9 147 aa13.66□□□□□ -0.22
HOXC8-201ENST00000040584 CYSTM1Q9H1C7 97 aa13.65□□□□□ -0.22
HOXC8-201ENST00000040584 C20orf197Q8N268 126 aa13.61□□□□□ -0.23
HOXC8-201ENST00000040584 BPY2O14599 106 aa13.6□□□□□ -0.23
HOXC8-201ENST00000040584 KLKP1Q107X0 134 aa13.59□□□□□ -0.23
HOXC8-201ENST00000040584 C1orf137Q5JT78 98 aa13.58□□□□□ -0.24
HOXC8-201ENST00000040584 SVIPQ8NHG7 77 aa13.58□□□□□ -0.24
HOXC8-201ENST00000040584 PSORS1C2Q9UIG4 136 aa13.57□□□□□ -0.24
HOXC8-201ENST00000040584 ERC2-IT1O76042 136 aa13.56□□□□□ -0.24
HOXC8-201ENST00000040584 PRLHP81277 87 aa13.55□□□□□ -0.24
HOXC8-201ENST00000040584 Q8NBF4 154 aa13.55□□□□□ -0.24
HOXC8-201ENST00000040584 SPRR4Q96PI1 79 aa13.55□□□□□ -0.24
HOXC8-201ENST00000040584 IGKV4-1P06312 121 aa13.55□□□□□ -0.24
HOXC8-201ENST00000040584 NDUFC1O43677 76 aa13.54□□□□□ -0.24
HOXC8-201ENST00000040584 A0A1W2PNM2 257 aa13.53□□□□□ -0.24
HOXC8-201ENST00000040584 ST20-AS1Q8NBB2 130 aa13.53□□□□□ -0.24
HOXC8-201ENST00000040584 H0Y9J4 135 aa13.52□□□□□ -0.25
HOXC8-201ENST00000040584 APOBP04114 4563 aaKnown RBP13.51□□□□□ -0.25
HOXC8-201ENST00000040584 F8WEM9 126 aa13.5□□□□□ -0.25
HOXC8-201ENST00000040584 UBE2AP49459 152 aa13.5□□□□□ -0.25
HOXC8-201ENST00000040584 KRTAP13-1Q8IUC0 172 aa13.48□□□□□ -0.25
HOXC8-201ENST00000040584 H7BZZ5 65 aa13.48□□□□□ -0.25
HOXC8-201ENST00000040584 HIGD2AQ9BW72 106 aa13.47□□□□□ -0.25
HOXC8-201ENST00000040584 FAM236DA0A1B0GTK5 79 aa13.46□□□□□ -0.25
HOXC8-201ENST00000040584 FAM236CP0DP71 79 aa13.46□□□□□ -0.25
HOXC8-201ENST00000040584 SMIM29Q86T20 159 aa13.45□□□□□ -0.26
HOXC8-201ENST00000040584 SRRM2Q9UQ35 2752 aaKnown RBP13.45□□□□□ -0.26
HOXC8-201ENST00000040584 Q8N9L7 120 aa13.43□□□□□ -0.26
HOXC8-201ENST00000040584 IGLV8-61A0A075B6I0 122 aa13.42□□□□□ -0.26
HOXC8-201ENST00000040584 SMR3BP02814 79 aaPredicted RBP13.42□□□□□ -0.26
HOXC8-201ENST00000040584 OCR1Q9BZK8 76 aa13.41□□□□□ -0.26
HOXC8-201ENST00000040584 IGLV7-43P04211 117 aa13.4□□□□□ -0.26
HOXC8-201ENST00000040584 ATP5EP56381 51 aaPredicted RBP13.4□□□□□ -0.26
HOXC8-201ENST00000040584 EPPK1P58107 5090 aaKnown RBP13.4□□□□□ -0.26
HOXC8-201ENST00000040584 VPS13BQ7Z7G8 4022 aa13.39□□□□□ -0.27
HOXC8-201ENST00000040584 TMEM254Q8TBM7 123 aa13.39□□□□□ -0.27
HOXC8-201ENST00000040584 SNURFQ9Y675 71 aa13.39□□□□□ -0.27
HOXC8-201ENST00000040584 ZNF861PO60384 105 aa13.38□□□□□ -0.27
HOXC8-201ENST00000040584 SERP1Q9Y6X1 66 aa13.38□□□□□ -0.27
HOXC8-201ENST00000040584 IGFL1Q6UW32 110 aa13.34□□□□□ -0.27
HOXC8-201ENST00000040584 SPRR1BP22528 89 aa13.33□□□□□ -0.27
HOXC8-201ENST00000040584 DSCR10P59022 87 aa13.32□□□□□ -0.28
HOXC8-201ENST00000040584 RPL37AP61513 92 aaKnown RBP13.31□□□□□ -0.28
HOXC8-201ENST00000040584 FAT1Q14517 4588 aa13.31□□□□□ -0.28
HOXC8-201ENST00000040584 A0A0U1RQV1 116 aa13.3□□□□□ -0.28
HOXC8-201ENST00000040584 CDK2AP2O75956 126 aa13.3□□□□□ -0.28
HOXC8-201ENST00000040584 OXTP01178 125 aa13.28□□□□□ -0.28
HOXC8-201ENST00000040584 HSPG2P98160 4391 aa13.26□□□□□ -0.29
HOXC8-201ENST00000040584 RYR1P21817 5038 aa13.24□□□□□ -0.29
HOXC8-201ENST00000040584 K7EQZ3 153 aa13.23□□□□□ -0.29
HOXC8-201ENST00000040584 HCG22E2RYF7 251 aa13.22□□□□□ -0.29
HOXC8-201ENST00000040584 ZNF706Q9Y5V0 76 aaPredicted RBP13.21□□□□□ -0.29
HOXC8-201ENST00000040584 KRTAP10-4P60372 401 aaPredicted RBP13.21□□□□□ -0.3
HOXC8-201ENST00000040584 A0A087WSZ3 146 aa13.2□□□□□ -0.3
HOXC8-201ENST00000040584 LINC00483Q53H64 154 aa13.2□□□□□ -0.3
HOXC8-201ENST00000040584 C5orf47Q569G3 176 aa13.2□□□□□ -0.3
HOXC8-201ENST00000040584 KIAA1109Q2LD37 5005 aa13.19□□□□□ -0.3
HOXC8-201ENST00000040584 ANAPC11Q9NYG5 84 aa13.19□□□□□ -0.3
HOXC8-201ENST00000040584 FAM229AH3BQW9 127 aa13.16□□□□□ -0.3
HOXC8-201ENST00000040584 SMIM26A0A096LP01 95 aa13.15□□□□□ -0.3
HOXC8-201ENST00000040584 Q5XG85 94 aa13.14□□□□□ -0.31
HOXC8-201ENST00000040584 A0A0G2JQZ4 141 aa13.13□□□□□ -0.31
HOXC8-201ENST00000040584 SPINK6Q6UWN8 80 aa13.13□□□□□ -0.31
HOXC8-201ENST00000040584 PLA2G1BP04054 148 aaKnown RBP13.12□□□□□ -0.31
HOXC8-201ENST00000040584 KRTAP17-1Q9BYP8 105 aa13.12□□□□□ -0.31
HOXC8-201ENST00000040584 Q5VSD8 79 aa13.11□□□□□ -0.31
HOXC8-201ENST00000040584 IGLV9-49A0A0B4J1Y8 123 aa13.08□□□□□ -0.32
HOXC8-201ENST00000040584 ZCCHC13Q8WW36 166 aaKnown RBP13.08□□□□□ -0.32
HOXC8-201ENST00000040584 KRTAP1-4P0C5Y4 121 aa13.06□□□□□ -0.32
HOXC8-201ENST00000040584 LINC00472Q9H8W2 130 aa13.06□□□□□ -0.32
HOXC8-201ENST00000040584 A8MWP4 228 aa13.06□□□□□ -0.32
HOXC8-201ENST00000040584 PRR15Q8IV56 129 aa13.06□□□□□ -0.32
HOXC8-201ENST00000040584 DEFB116Q30KQ4 102 aa13.05□□□□□ -0.32
HOXC8-201ENST00000040584 C4orf26Q17RF5 130 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms