RNA–Protein interactions for RNA: ENST00000006015.3

HOXA11-201, Transcript of homeobox A11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA11, Length 2,295 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11-201ENST00000006015 A8MUN3 132 aa12.54□□□□□ -0.4
HOXA11-201ENST00000006015 B9D2Q9BPU9 175 aa12.54□□□□□ -0.4
HOXA11-201ENST00000006015 UBE2BP63146 152 aa12.54□□□□□ -0.4
HOXA11-201ENST00000006015 MGAM2Q2M2H8 2515 aa12.53□□□□□ -0.4
HOXA11-201ENST00000006015 LYSTQ99698 3801 aa12.52□□□□□ -0.4
HOXA11-201ENST00000006015 WFDC13Q8IUB5 93 aa12.51□□□□□ -0.41
HOXA11-201ENST00000006015 SPANXA2-OT1Q8N9U9 137 aa12.5□□□□□ -0.41
HOXA11-201ENST00000006015 Q5VV11 94 aa12.49□□□□□ -0.41
HOXA11-201ENST00000006015 MRPL55Q7Z7F7 128 aaKnown RBP12.49□□□□□ -0.41
HOXA11-201ENST00000006015 KRTAP7-1Q8IUC3 87 aa12.49□□□□□ -0.41
HOXA11-201ENST00000006015 LINC00208Q96KT6 92 aa12.49□□□□□ -0.41
HOXA11-201ENST00000006015 IGFL1Q6UW32 110 aa12.48□□□□□ -0.41
HOXA11-201ENST00000006015 H3BPC8 53 aa12.48□□□□□ -0.41
HOXA11-201ENST00000006015 DNAH1Q9P2D7 4330 aa12.47□□□□□ -0.41
HOXA11-201ENST00000006015 DEFB116Q30KQ4 102 aa12.45□□□□□ -0.42
HOXA11-201ENST00000006015 REG3GQ6UW15 175 aa12.45□□□□□ -0.42
HOXA11-201ENST00000006015 LIMD2Q9BT23 127 aa12.45□□□□□ -0.42
HOXA11-201ENST00000006015 LINC00588Q9Y4M8 146 aa12.45□□□□□ -0.42
HOXA11-201ENST00000006015 KRTAP29-1A8MX34 341 aaPredicted RBP12.44□□□□□ -0.42
HOXA11-201ENST00000006015 UBE2AP49459 152 aa12.44□□□□□ -0.42
HOXA11-201ENST00000006015 K7EIL1 84 aa12.44□□□□□ -0.42
HOXA11-201ENST00000006015 CASC10Q5T4H9 136 aa12.44□□□□□ -0.42
HOXA11-201ENST00000006015 H0Y9P7 68 aa12.43□□□□□ -0.42
HOXA11-201ENST00000006015 A0A087WSZ3 146 aa12.42□□□□□ -0.42
HOXA11-201ENST00000006015 A0A0G2JQZ4 141 aa12.42□□□□□ -0.42
HOXA11-201ENST00000006015 A0A1W2PNN7 141 aa12.42□□□□□ -0.42
HOXA11-201ENST00000006015 DNAH10OSP0CZ25 163 aa12.42□□□□□ -0.42
HOXA11-201ENST00000006015 IGLV8-61A0A075B6I0 122 aa12.41□□□□□ -0.42
HOXA11-201ENST00000006015 Q8N9P0 234 aaPredicted RBP12.41□□□□□ -0.42
HOXA11-201ENST00000006015 COL7A1Q02388 2944 aa12.41□□□□□ -0.42
HOXA11-201ENST00000006015 DNAH10Q8IVF4 4471 aa12.39□□□□□ -0.43
HOXA11-201ENST00000006015 STAB2Q8WWQ8 2551 aa12.38□□□□□ -0.43
HOXA11-201ENST00000006015 CHKB-CPT1BH3BT56 60 aa12.38□□□□□ -0.43
HOXA11-201ENST00000006015 CASC2Q6XLA1 102 aa12.38□□□□□ -0.43
HOXA11-201ENST00000006015 A8MU10 97 aa12.37□□□□□ -0.43
HOXA11-201ENST00000006015 RPL37AP61513 92 aaKnown RBP12.37□□□□□ -0.43
HOXA11-201ENST00000006015 CD164Q04900 197 aa12.37□□□□□ -0.43
HOXA11-201ENST00000006015 PRR15LQ9BU68 103 aa12.36□□□□□ -0.43
HOXA11-201ENST00000006015 C9orf163Q8N9P6 203 aa12.34□□□□□ -0.43
HOXA11-201ENST00000006015 CNBPP62633 177 aaKnown RBP12.32□□□□□ -0.44
HOXA11-201ENST00000006015 C16orf90A8MZG2 172 aa12.32□□□□□ -0.44
HOXA11-201ENST00000006015 A8MWP4 228 aa12.3□□□□□ -0.44
HOXA11-201ENST00000006015 Q75L30 129 aa12.3□□□□□ -0.44
HOXA11-201ENST00000006015 CSMD3Q7Z407 3707 aa12.3□□□□□ -0.44
HOXA11-201ENST00000006015 DNAH9Q9NYC9 4486 aa12.3□□□□□ -0.44
HOXA11-201ENST00000006015 TENM2Q9NT68 2774 aa12.3□□□□□ -0.44
HOXA11-201ENST00000006015 PRLHP81277 87 aa12.29□□□□□ -0.44
HOXA11-201ENST00000006015 KTN1-AS1Q86SY8 53 aa12.28□□□□□ -0.44
HOXA11-201ENST00000006015 DNAH7Q8WXX0 4024 aa12.28□□□□□ -0.44
HOXA11-201ENST00000006015 LOC101927531A0A1B0GV80 90 aa12.26□□□□□ -0.45
HOXA11-201ENST00000006015 COA5Q86WW8 74 aa12.26□□□□□ -0.45
HOXA11-201ENST00000006015 ATP11AUNQ6ZP68 121 aa12.25□□□□□ -0.45
HOXA11-201ENST00000006015 LINC00472Q9H8W2 130 aa12.25□□□□□ -0.45
HOXA11-201ENST00000006015 IGLV7-46A0A075B6I9 117 aa12.23□□□□□ -0.45
HOXA11-201ENST00000006015 A6NED7 52 aa12.22□□□□□ -0.45
HOXA11-201ENST00000006015 SPTSSBQ8NFR3 76 aa12.22□□□□□ -0.45
HOXA11-201ENST00000006015 KRTAP1-5Q9BYS1 174 aa12.22□□□□□ -0.45
HOXA11-201ENST00000006015 LCA10Q71F78 164 aa12.21□□□□□ -0.45
HOXA11-201ENST00000006015 SPRR1BP22528 89 aa12.18□□□□□ -0.46
HOXA11-201ENST00000006015 MMP24-AS1A0A0U1RRL7 71 aa12.18□□□□□ -0.46
HOXA11-201ENST00000006015 MDFIQ99750 246 aa12.18□□□□□ -0.46
HOXA11-201ENST00000006015 A0A096LNI7 61 aa12.16□□□□□ -0.46
HOXA11-201ENST00000006015 NDUFS5O43920 106 aa12.16□□□□□ -0.46
HOXA11-201ENST00000006015 PLECQ15149 4684 aaKnown RBP12.16□□□□□ -0.46
HOXA11-201ENST00000006015 H0Y9J4 135 aa12.15□□□□□ -0.46
HOXA11-201ENST00000006015 CDC42SE1Q9NRR8 79 aa12.15□□□□□ -0.46
HOXA11-201ENST00000006015 IGKV2-24A0A0C4DH68 120 aa12.14□□□□□ -0.47
HOXA11-201ENST00000006015 A6NN06 94 aa12.13□□□□□ -0.47
HOXA11-201ENST00000006015 PHF5AQ7RTV0 110 aaKnown RBP12.11□□□□□ -0.47
HOXA11-201ENST00000006015 RBM12B-AS1Q9P1G2 102 aa12.11□□□□□ -0.47
HOXA11-201ENST00000006015 LINC01558Q9Y6Z2 57 aa12.11□□□□□ -0.47
HOXA11-201ENST00000006015 TP53AIP1Q9HCN2 124 aa12.1□□□□□ -0.47
HOXA11-201ENST00000006015 DYNC2H1Q8NCM8 4307 aaKnown RBP12.1□□□□□ -0.47
HOXA11-201ENST00000006015 PCOTHQ58A44 107 aa12.09□□□□□ -0.47
HOXA11-201ENST00000006015 UBE2DNLQ8IWF7 75 aa12.08□□□□□ -0.48
HOXA11-201ENST00000006015 PLAC8Q9NZF1 115 aa12.08□□□□□ -0.48
HOXA11-201ENST00000006015 APLNQ9ULZ1 77 aa12.07□□□□□ -0.48
HOXA11-201ENST00000006015 MOBPQ13875 183 aa12.06□□□□□ -0.48
HOXA11-201ENST00000006015 ASB16-AS1Q495Z4 193 aa12.05□□□□□ -0.48
HOXA11-201ENST00000006015 SPAG11AQ6PDA7 123 aa12.03□□□□□ -0.48
HOXA11-201ENST00000006015 Q6ZR54 194 aa12.03□□□□□ -0.48
HOXA11-201ENST00000006015 KRTAP11-1Q8IUC1 163 aa12.02□□□□□ -0.49
HOXA11-201ENST00000006015 PRKDCP78527 4128 aaKnown RBP12.01□□□□□ -0.49
HOXA11-201ENST00000006015 SRRM2Q9UQ35 2752 aaKnown RBP12.01□□□□□ -0.49
HOXA11-201ENST00000006015 STARD9Q9P2P6 4700 aa11.99□□□□□ -0.49
HOXA11-201ENST00000006015 C7orf65Q6ZTY9 151 aa11.99□□□□□ -0.49
HOXA11-201ENST00000006015 CHTF8P0CG12 524 aa11.99□□□□□ -0.49
HOXA11-201ENST00000006015 Q96NJ1 140 aa11.98□□□□□ -0.49
HOXA11-201ENST00000006015 C8orf17Q9NRJ1 99 aa11.97□□□□□ -0.49
HOXA11-201ENST00000006015 HRES1P13985 223 aa11.95□□□□□ -0.5
HOXA11-201ENST00000006015 SPINK7P58062 85 aa11.92□□□□□ -0.5
HOXA11-201ENST00000006015 C14orf177Q52M58 125 aa11.89□□□□□ -0.51
HOXA11-201ENST00000006015 KMT2AQ03164 3969 aa11.88□□□□□ -0.51
HOXA11-201ENST00000006015 A0A1B0GVX0 72 aa11.88□□□□□ -0.51
HOXA11-201ENST00000006015 NBDYA0A0U1RRE5 68 aa11.88□□□□□ -0.51
HOXA11-201ENST00000006015 KRTAP13-1Q8IUC0 172 aa11.88□□□□□ -0.51
HOXA11-201ENST00000006015 DNHD1Q96M86 4753 aa11.86□□□□□ -0.51
HOXA11-201ENST00000006015 MEGF8Q7Z7M0 2845 aa11.86□□□□□ -0.51
HOXA11-201ENST00000006015 MRPL34Q9BQ48 92 aaKnown RBP11.86□□□□□ -0.51
HOXA11-201ENST00000006015 VPS13DQ5THJ4 4388 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms