RNA–Protein interactions for RNA: ENST00000642127.1

HCCAT5-202, hepatocellular carcinoma associated transcript 5, humanhuman

BASIC

Gene HCCAT5, Length 1,029 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCAT5-202ENST00000642127 KRTAP4-1Q9BYQ7 146 aa4.6□□□□□ -1.67
HCCAT5-202ENST00000642127 TRAPPC1Q9Y5R8 145 aa4.6□□□□□ -1.67
HCCAT5-202ENST00000642127 UQCC3Q6UW78 93 aa4.59□□□□□ -1.67
HCCAT5-202ENST00000642127 FP248Q71RG6 208 aaPredicted RBP4.59□□□□□ -1.67
HCCAT5-202ENST00000642127 TRBV10-3A0A0K0K1G6 114 aa4.58□□□□□ -1.68
HCCAT5-202ENST00000642127 TMEM223A0PJW6 202 aa4.58□□□□□ -1.68
HCCAT5-202ENST00000642127 CFC1BP0CG36 223 aa4.58□□□□□ -1.68
HCCAT5-202ENST00000642127 CFC1P0CG37 223 aa4.58□□□□□ -1.68
HCCAT5-202ENST00000642127 COX19Q49B96 90 aa4.58□□□□□ -1.68
HCCAT5-202ENST00000642127 ERC2-IT1O76042 136 aa4.57□□□□□ -1.68
HCCAT5-202ENST00000642127 C9orf153Q5TBE3 101 aa4.57□□□□□ -1.68
HCCAT5-202ENST00000642127 SFTA2Q6UW10 78 aa4.57□□□□□ -1.68
HCCAT5-202ENST00000642127 IFITM2Q01629 132 aa4.56□□□□□ -1.68
HCCAT5-202ENST00000642127 RHEBQ15382 184 aa4.56□□□□□ -1.68
HCCAT5-202ENST00000642127 ASB16-AS1Q495Z4 193 aa4.56□□□□□ -1.68
HCCAT5-202ENST00000642127 NDUFA12Q9UI09 145 aa4.56□□□□□ -1.68
HCCAT5-202ENST00000642127 SPINK1P00995 79 aa4.55□□□□□ -1.68
HCCAT5-202ENST00000642127 NPC2P61916 151 aa4.55□□□□□ -1.68
HCCAT5-202ENST00000642127 IFI27L1Q96BM0 104 aa4.55□□□□□ -1.68
HCCAT5-202ENST00000642127 DDTP30046 118 aa4.54□□□□□ -1.68
HCCAT5-202ENST00000642127 SPRR1AP35321 89 aa4.54□□□□□ -1.68
HCCAT5-202ENST00000642127 TSPEAR-AS2P59090 65 aa4.54□□□□□ -1.68
HCCAT5-202ENST00000642127 SNRPEP62304 92 aaKnown RBP4.54□□□□□ -1.68
HCCAT5-202ENST00000642127 CTAG1AP78358 180 aa4.54□□□□□ -1.68
HCCAT5-202ENST00000642127 S100A12P80511 92 aa4.54□□□□□ -1.68
HCCAT5-202ENST00000642127 KRTAP5-1Q6L8H4 278 aa4.54□□□□□ -1.68
HCCAT5-202ENST00000642127 HRCT1Q6UXD1 115 aa4.54□□□□□ -1.68
HCCAT5-202ENST00000642127 Q8N377 158 aa4.54□□□□□ -1.68
HCCAT5-202ENST00000642127 FAM19A2Q8N3H0 131 aa4.54□□□□□ -1.68
HCCAT5-202ENST00000642127 KCNQ1DNQ9H478 68 aa4.54□□□□□ -1.68
HCCAT5-202ENST00000642127 KRTAP4-16G5E9R7 235 aaPredicted RBP4.53□□□□□ -1.68
HCCAT5-202ENST00000642127 HERV-K104P63124 156 aa4.53□□□□□ -1.68
HCCAT5-202ENST00000642127 LINC00483Q53H64 154 aa4.53□□□□□ -1.68
HCCAT5-202ENST00000642127 Q9BRP9 147 aa4.53□□□□□ -1.68
HCCAT5-202ENST00000642127 TRAV12-1A0A0B4J245 112 aa4.52□□□□□ -1.69
HCCAT5-202ENST00000642127 MYMXA0A1B0GTQ4 84 aa4.52□□□□□ -1.69
HCCAT5-202ENST00000642127 APOC3P02656 99 aa4.52□□□□□ -1.69
HCCAT5-202ENST00000642127 S100A7L2Q5SY68 101 aa4.52□□□□□ -1.69
HCCAT5-202ENST00000642127 ST20-AS1Q8NBB2 130 aa4.52□□□□□ -1.69
HCCAT5-202ENST00000642127 PMCHL2Q9BQD1 86 aa4.52□□□□□ -1.69
HCCAT5-202ENST00000642127 MIEN1Q9BRT3 115 aa4.52□□□□□ -1.69
HCCAT5-202ENST00000642127 MAP1LC3CQ9BXW4 147 aa4.52□□□□□ -1.69
HCCAT5-202ENST00000642127 C9orf92A6NGG3 77 aa4.51□□□□□ -1.69
HCCAT5-202ENST00000642127 SLC25A20O43772 301 aa4.51□□□□□ -1.69
HCCAT5-202ENST00000642127 HSBP1O75506 76 aa4.51□□□□□ -1.69
HCCAT5-202ENST00000642127 TRAV23DV6A0A075B6W5 121 aa4.5□□□□□ -1.69
HCCAT5-202ENST00000642127 C10orf91Q5T1B1 145 aa4.5□□□□□ -1.69
HCCAT5-202ENST00000642127 Q6ZRX8 168 aa4.5□□□□□ -1.69
HCCAT5-202ENST00000642127 CHCHD1Q96BP2 118 aaKnown RBP4.5□□□□□ -1.69
HCCAT5-202ENST00000642127 LINC00587B1AMM8 73 aa4.49□□□□□ -1.69
HCCAT5-202ENST00000642127 LGALS3P17931 250 aaKnown RBP4.49□□□□□ -1.69
HCCAT5-202ENST00000642127 SSBP3-AS1Q7Z2R9 100 aa4.49□□□□□ -1.69
HCCAT5-202ENST00000642127 LITAFQ99732 161 aa4.49□□□□□ -1.69
HCCAT5-202ENST00000642127 SPANXB1Q9NS25 103 aaPredicted RBP4.49□□□□□ -1.69
HCCAT5-202ENST00000642127 IGLV8-61A0A075B6I0 122 aa4.48□□□□□ -1.69
HCCAT5-202ENST00000642127 LEPROTO15243 131 aa4.48□□□□□ -1.69
HCCAT5-202ENST00000642127 FABP4P15090 132 aa4.48□□□□□ -1.69
HCCAT5-202ENST00000642127 PCOTHQ58A44 107 aa4.48□□□□□ -1.69
HCCAT5-202ENST00000642127 CRCT1Q9UGL9 99 aa4.48□□□□□ -1.69
HCCAT5-202ENST00000642127 J3QQQ9 107 aa4.47□□□□□ -1.69
HCCAT5-202ENST00000642127 ZNF73O43830 326 aaPredicted RBP4.47□□□□□ -1.69
HCCAT5-202ENST00000642127 LEPROTL1O95214 131 aa4.47□□□□□ -1.69
HCCAT5-202ENST00000642127 HERVK_113P61574 105 aa4.47□□□□□ -1.69
HCCAT5-202ENST00000642127 NDUFA5Q16718 116 aa4.47□□□□□ -1.69
HCCAT5-202ENST00000642127 PET117Q6UWS5 81 aa4.47□□□□□ -1.69
HCCAT5-202ENST00000642127 SOSTDC1Q6X4U4 206 aa4.47□□□□□ -1.69
HCCAT5-202ENST00000642127 OR13C6PQ8NH95 151 aa4.47□□□□□ -1.69
HCCAT5-202ENST00000642127 TRBV10-2A0A0K0K1G8 114 aa4.46□□□□□ -1.7
HCCAT5-202ENST00000642127 H7C2G1 150 aa4.46□□□□□ -1.7
HCCAT5-202ENST00000642127 SERF1AO75920 110 aa4.46□□□□□ -1.7
HCCAT5-202ENST00000642127 SNAPINO95295 136 aa4.46□□□□□ -1.7
HCCAT5-202ENST00000642127 IGLV6-57P01721 117 aa4.46□□□□□ -1.7
HCCAT5-202ENST00000642127 RPS29P62273 56 aaKnown RBP4.46□□□□□ -1.7
HCCAT5-202ENST00000642127 JOSD1Q15040 202 aaPredicted RBP4.46□□□□□ -1.7
HCCAT5-202ENST00000642127 SVBPQ8N300 66 aa4.46□□□□□ -1.7
HCCAT5-202ENST00000642127 DPM2O94777 84 aa4.45□□□□□ -1.7
HCCAT5-202ENST00000642127 PLNP26678 52 aa4.45□□□□□ -1.7
HCCAT5-202ENST00000642127 MT1HP80294 61 aa4.45□□□□□ -1.7
HCCAT5-202ENST00000642127 Q1RN00 199 aa4.45□□□□□ -1.7
HCCAT5-202ENST00000642127 DEFB105AQ8NG35 78 aa4.45□□□□□ -1.7
HCCAT5-202ENST00000642127 YPEL4Q96NS1 127 aa4.45□□□□□ -1.7
HCCAT5-202ENST00000642127 IGKCP01834 107 aa4.44□□□□□ -1.7
HCCAT5-202ENST00000642127 TRGC2P03986 189 aa4.44□□□□□ -1.7
HCCAT5-202ENST00000642127 HINT1P49773 126 aaPredicted RBP4.44□□□□□ -1.7
HCCAT5-202ENST00000642127 ADAMTSL4-AS1Q5T5F5 129 aa4.44□□□□□ -1.7
HCCAT5-202ENST00000642127 LIMD2Q9BT23 127 aa4.44□□□□□ -1.7
HCCAT5-202ENST00000642127 A0A0G2JQZ4 141 aa4.43□□□□□ -1.7
HCCAT5-202ENST00000642127 A0A0J9YXY3 114 aa4.43□□□□□ -1.7
HCCAT5-202ENST00000642127 M0R2T5 61 aa4.43□□□□□ -1.7
HCCAT5-202ENST00000642127 NDUFC2O95298 119 aa4.43□□□□□ -1.7
HCCAT5-202ENST00000642127 LOC107984156A0A0G2JMH3 177 aa4.42□□□□□ -1.7
HCCAT5-202ENST00000642127 NMUP48645 174 aa4.42□□□□□ -1.7
HCCAT5-202ENST00000642127 KRTAP19-2Q3LHN2 52 aa4.42□□□□□ -1.7
HCCAT5-202ENST00000642127 ARL17AQ8IVW1 177 aa4.42□□□□□ -1.7
HCCAT5-202ENST00000642127 HSPB8Q9UJY1 196 aa4.42□□□□□ -1.7
HCCAT5-202ENST00000642127 NOTCH2NLQ7Z3S9 236 aa4.41□□□□□ -1.7
HCCAT5-202ENST00000642127 LAMTOR3Q9UHA4 124 aa4.41□□□□□ -1.7
HCCAT5-202ENST00000642127 COX7BP24311 80 aa4.4□□□□□ -1.71
HCCAT5-202ENST00000642127 TAL2Q16559 108 aa4.4□□□□□ -1.71
HCCAT5-202ENST00000642127 KRTAP5-4Q6L8H1 288 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms