RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 ANKRD39Q53RE8 183 aa8.76□□□□□ -1.01
PHGDH-231ENST00000641939 ATOH7Q8N100 152 aa8.76□□□□□ -1.01
PHGDH-231ENST00000641939 C3orf22Q8N5N4 141 aa8.76□□□□□ -1.01
PHGDH-231ENST00000641939 SPANXCQ9NY87 97 aa8.76□□□□□ -1.01
PHGDH-231ENST00000641939 Q6ZRX8 168 aa8.75□□□□□ -1.01
PHGDH-231ENST00000641939 SCGB1D4Q6XE38 83 aa8.74□□□□□ -1.01
PHGDH-231ENST00000641939 HIST3H2BBQ8N257 126 aa8.74□□□□□ -1.01
PHGDH-231ENST00000641939 CBY1Q9Y3M2 126 aa8.74□□□□□ -1.01
PHGDH-231ENST00000641939 ZNF73O43830 326 aaPredicted RBP8.73□□□□□ -1.01
PHGDH-231ENST00000641939 S100A2P29034 98 aa8.73□□□□□ -1.01
PHGDH-231ENST00000641939 HIST1H2BLQ99880 126 aa8.73□□□□□ -1.01
PHGDH-231ENST00000641939 Q9BRP9 147 aa8.73□□□□□ -1.01
PHGDH-231ENST00000641939 PPDPFQ9H3Y8 114 aa8.73□□□□□ -1.01
PHGDH-231ENST00000641939 ERC2-IT1O76042 136 aa8.72□□□□□ -1.01
PHGDH-231ENST00000641939 JOSD1Q15040 202 aaPredicted RBP8.72□□□□□ -1.01
PHGDH-231ENST00000641939 SPANXDQ9BXN6 97 aa8.72□□□□□ -1.01
PHGDH-231ENST00000641939 CTAG1AP78358 180 aa8.71□□□□□ -1.02
PHGDH-231ENST00000641939 LINC00483Q53H64 154 aa8.71□□□□□ -1.02
PHGDH-231ENST00000641939 OR13C6PQ8NH95 151 aa8.71□□□□□ -1.02
PHGDH-231ENST00000641939 S100A6P06703 90 aa8.7□□□□□ -1.02
PHGDH-231ENST00000641939 HINT1P49773 126 aaPredicted RBP8.7□□□□□ -1.02
PHGDH-231ENST00000641939 SNRPEP62304 92 aaKnown RBP8.7□□□□□ -1.02
PHGDH-231ENST00000641939 GAGE2AQ6NT46 116 aa8.7□□□□□ -1.02
PHGDH-231ENST00000641939 LINC00518Q8N0U6 118 aa8.7□□□□□ -1.02
PHGDH-231ENST00000641939 PCP2Q8IVA1 136 aa8.69□□□□□ -1.02
PHGDH-231ENST00000641939 COPS9Q8WXC6 57 aa8.69□□□□□ -1.02
PHGDH-231ENST00000641939 SPAG11AQ6PDA7 123 aa8.68□□□□□ -1.02
PHGDH-231ENST00000641939 Q6ZVH6 145 aa8.68□□□□□ -1.02
PHGDH-231ENST00000641939 IFITM1P13164 125 aa8.67□□□□□ -1.02
PHGDH-231ENST00000641939 RNF213Q63HN8 5207 aa8.67□□□□□ -1.02
PHGDH-231ENST00000641939 C4orf48Q5BLP8 95 aa8.66□□□□□ -1.02
PHGDH-231ENST00000641939 Q8NBF4 154 aa8.66□□□□□ -1.02
PHGDH-231ENST00000641939 RETNLBQ9BQ08 111 aa8.66□□□□□ -1.02
PHGDH-231ENST00000641939 HSBP1L1C9JCN9 74 aa8.64□□□□□ -1.03
PHGDH-231ENST00000641939 MUSTN1Q8IVN3 82 aa8.64□□□□□ -1.03
PHGDH-231ENST00000641939 IGLV9-49A0A0B4J1Y8 123 aa8.63□□□□□ -1.03
PHGDH-231ENST00000641939 C5orf52A6NGY3 159 aa8.63□□□□□ -1.03
PHGDH-231ENST00000641939 MOBPQ13875 183 aa8.63□□□□□ -1.03
PHGDH-231ENST00000641939 DHRS4-AS1Q9P1J3 65 aa8.63□□□□□ -1.03
PHGDH-231ENST00000641939 SSBP3-AS1Q7Z2R9 100 aa8.62□□□□□ -1.03
PHGDH-231ENST00000641939 ST20-AS1Q8NBB2 130 aa8.62□□□□□ -1.03
PHGDH-231ENST00000641939 COX7BP24311 80 aa8.61□□□□□ -1.03
PHGDH-231ENST00000641939 ELOF1P60002 83 aaKnown RBP8.61□□□□□ -1.03
PHGDH-231ENST00000641939 C6orf99Q4VX62 202 aa8.61□□□□□ -1.03
PHGDH-231ENST00000641939 A6NDN8 102 aa8.6□□□□□ -1.03
PHGDH-231ENST00000641939 SPINK1P00995 79 aa8.6□□□□□ -1.03
PHGDH-231ENST00000641939 SCGB1D1O95968 90 aa8.59□□□□□ -1.03
PHGDH-231ENST00000641939 IGLV7-46A0A075B6I9 117 aa8.58□□□□□ -1.04
PHGDH-231ENST00000641939 TRBV7-6A0A0J9YX20 115 aa8.58□□□□□ -1.04
PHGDH-231ENST00000641939 C9orf153Q5TBE3 101 aa8.58□□□□□ -1.04
PHGDH-231ENST00000641939 TRAV13-2A0A0B4J235 113 aa8.57□□□□□ -1.04
PHGDH-231ENST00000641939 SPRR1BP22528 89 aa8.57□□□□□ -1.04
PHGDH-231ENST00000641939 A0A1B0GWB2 263 aa8.56□□□□□ -1.04
PHGDH-231ENST00000641939 RPS29P62273 56 aaKnown RBP8.55□□□□□ -1.04
PHGDH-231ENST00000641939 TPRXLQ17RH7 258 aa8.55□□□□□ -1.04
PHGDH-231ENST00000641939 SLC25A34Q6PIV7 304 aa8.55□□□□□ -1.04
PHGDH-231ENST00000641939 FP248Q71RG6 208 aaPredicted RBP8.55□□□□□ -1.04
PHGDH-231ENST00000641939 TAL2Q16559 108 aa8.52□□□□□ -1.05
PHGDH-231ENST00000641939 SMIM11BQ8TCY0 68 aa8.52□□□□□ -1.05
PHGDH-231ENST00000641939 CDIP1Q9H305 208 aa8.52□□□□□ -1.05
PHGDH-231ENST00000641939 LAMTOR3Q9UHA4 124 aa8.52□□□□□ -1.05
PHGDH-231ENST00000641939 A4D1N5 150 aa8.51□□□□□ -1.05
PHGDH-231ENST00000641939 COX8AP10176 69 aa8.51□□□□□ -1.05
PHGDH-231ENST00000641939 DEFB105AQ8NG35 78 aa8.51□□□□□ -1.05
PHGDH-231ENST00000641939 TEX49A0A1B0GTD5 131 aa8.5□□□□□ -1.05
PHGDH-231ENST00000641939 Q8N377 158 aa8.5□□□□□ -1.05
PHGDH-231ENST00000641939 MUC2Q02817 5179 aa8.49□□□□□ -1.05
PHGDH-231ENST00000641939 HIST1H4GQ99525 98 aa8.49□□□□□ -1.05
PHGDH-231ENST00000641939 DLEU1O43261 78 aa8.48□□□□□ -1.05
PHGDH-231ENST00000641939 SLC25A20O43772 301 aa8.48□□□□□ -1.05
PHGDH-231ENST00000641939 NHP2Q9NX24 153 aaKnown RBP8.48□□□□□ -1.05
PHGDH-231ENST00000641939 MUC17Q685J3 4493 aa8.47□□□□□ -1.05
PHGDH-231ENST00000641939 Q1RN00 199 aa8.47□□□□□ -1.05
PHGDH-231ENST00000641939 IGLV5-48A0A075B6I7 105 aa8.46□□□□□ -1.06
PHGDH-231ENST00000641939 LINC01547P58512 204 aaPredicted RBP8.46□□□□□ -1.06
PHGDH-231ENST00000641939 VAMP3Q15836 100 aa8.46□□□□□ -1.06
PHGDH-231ENST00000641939 PAM16Q9Y3D7 125 aa8.46□□□□□ -1.06
PHGDH-231ENST00000641939 KRTAP13-3Q3SY46 172 aa8.45□□□□□ -1.06
PHGDH-231ENST00000641939 SPATA45Q537H7 98 aa8.45□□□□□ -1.06
PHGDH-231ENST00000641939 C14orf144Q96I85 54 aa8.45□□□□□ -1.06
PHGDH-231ENST00000641939 SMIM29Q86T20 159 aa8.44□□□□□ -1.06
PHGDH-231ENST00000641939 HRCT1Q6UXD1 115 aa8.43□□□□□ -1.06
PHGDH-231ENST00000641939 C12orf57Q99622 126 aa8.43□□□□□ -1.06
PHGDH-231ENST00000641939 VAMP8Q9BV40 100 aa8.43□□□□□ -1.06
PHGDH-231ENST00000641939 PRO1933Q9H354 126 aa8.43□□□□□ -1.06
PHGDH-231ENST00000641939 LINC00575Q6W349 94 aa8.42□□□□□ -1.06
PHGDH-231ENST00000641939 LIMD2Q9BT23 127 aa8.42□□□□□ -1.06
PHGDH-231ENST00000641939 HIGD1BQ9P298 99 aa8.42□□□□□ -1.06
PHGDH-231ENST00000641939 CD164Q04900 197 aa8.4□□□□□ -1.06
PHGDH-231ENST00000641939 hADV29S1A0JD25 119 aa8.39□□□□□ -1.07
PHGDH-231ENST00000641939 H7C2G1 150 aa8.38□□□□□ -1.07
PHGDH-231ENST00000641939 BVES-AS1Q5T3Y7 98 aa8.38□□□□□ -1.07
PHGDH-231ENST00000641939 C2orf91Q6ZV80 131 aa8.38□□□□□ -1.07
PHGDH-231ENST00000641939 CFC1BP0CG36 223 aa8.37□□□□□ -1.07
PHGDH-231ENST00000641939 CFC1P0CG37 223 aa8.37□□□□□ -1.07
PHGDH-231ENST00000641939 Q6ZQY7 126 aa8.37□□□□□ -1.07
PHGDH-231ENST00000641939 A0A0U1RQV1 116 aa8.36□□□□□ -1.07
PHGDH-231ENST00000641939 RAB37Q96AX2 223 aa8.36□□□□□ -1.07
PHGDH-231ENST00000641939 A0A0B4J2C4 111 aa8.34□□□□□ -1.07
PHGDH-231ENST00000641939 A0A0G2JQZ4 141 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms