RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-222ENST00000640072 SPTBN5Q9NRC6 3674 aaKnown RBP3.85□□□□□ -1.79
NECAP1-222ENST00000640072 LY6EQ16553 131 aa3.85□□□□□ -1.79
NECAP1-222ENST00000640072 BRD3OSQ6XYD6 125 aa3.85□□□□□ -1.79
NECAP1-222ENST00000640072 IGF2RP11717 2491 aa3.85□□□□□ -1.79
NECAP1-222ENST00000640072 MYO15AQ9UKN7 3530 aa3.85□□□□□ -1.79
NECAP1-222ENST00000640072 PRR34Q9NV39 138 aa3.85□□□□□ -1.79
NECAP1-222ENST00000640072 WDFY3Q8IZQ1 3526 aa3.85□□□□□ -1.79
NECAP1-222ENST00000640072 SLURP1P55000 103 aa3.85□□□□□ -1.79
NECAP1-222ENST00000640072 SPATA8Q6RVD6 105 aa3.85□□□□□ -1.79
NECAP1-222ENST00000640072 C5orf56Q8N8D9 126 aa3.84□□□□□ -1.8
NECAP1-222ENST00000640072 NOP10Q9NPE3 64 aaKnown RBP3.84□□□□□ -1.8
NECAP1-222ENST00000640072 ANGP03950 147 aaKnown RBP3.83□□□□□ -1.8
NECAP1-222ENST00000640072 HRES1P13985 223 aa3.83□□□□□ -1.8
NECAP1-222ENST00000640072 Q6YL49 198 aa3.83□□□□□ -1.8
NECAP1-222ENST00000640072 SPEGQ15772 3267 aa3.83□□□□□ -1.8
NECAP1-222ENST00000640072 FRYLO94915 3013 aa3.83□□□□□ -1.8
NECAP1-222ENST00000640072 U3KQA8 63 aa3.83□□□□□ -1.8
NECAP1-222ENST00000640072 ZNF861PO60384 105 aa3.83□□□□□ -1.8
NECAP1-222ENST00000640072 IGLV1-40P01703 118 aa3.83□□□□□ -1.8
NECAP1-222ENST00000640072 RPL37AP61513 92 aaKnown RBP3.82□□□□□ -1.8
NECAP1-222ENST00000640072 KLK9Q2XQG4 91 aa3.82□□□□□ -1.8
NECAP1-222ENST00000640072 IGLV5-48A0A075B6I7 105 aa3.82□□□□□ -1.8
NECAP1-222ENST00000640072 TTC28Q96AY4 2481 aa3.82□□□□□ -1.8
NECAP1-222ENST00000640072 H3BUA1 57 aa3.82□□□□□ -1.8
NECAP1-222ENST00000640072 Q8N377 158 aa3.81□□□□□ -1.8
NECAP1-222ENST00000640072 SPRR4Q96PI1 79 aa3.81□□□□□ -1.8
NECAP1-222ENST00000640072 CSPG4Q6UVK1 2322 aa3.81□□□□□ -1.8
NECAP1-222ENST00000640072 KRTAP23-1A1A580 65 aa3.8□□□□□ -1.8
NECAP1-222ENST00000640072 SONP18583 2426 aaKnown RBP3.8□□□□□ -1.8
NECAP1-222ENST00000640072 GPR179Q6PRD1 2367 aa3.8□□□□□ -1.8
NECAP1-222ENST00000640072 A0A096LPF7 62 aa3.8□□□□□ -1.8
NECAP1-222ENST00000640072 DEFB136Q30KP8 78 aa3.8□□□□□ -1.8
NECAP1-222ENST00000640072 LAMA1P25391 3075 aa3.8□□□□□ -1.8
NECAP1-222ENST00000640072 DSPP15924 2871 aaKnown RBP3.79□□□□□ -1.8
NECAP1-222ENST00000640072 Q5W150 140 aa3.79□□□□□ -1.8
NECAP1-222ENST00000640072 ACYP2P14621 99 aa3.79□□□□□ -1.8
NECAP1-222ENST00000640072 SSBP3-AS1Q7Z2R9 100 aa3.78□□□□□ -1.8
NECAP1-222ENST00000640072 C16orf74Q96GX8 76 aa3.78□□□□□ -1.8
NECAP1-222ENST00000640072 F8P00451 2351 aa3.78□□□□□ -1.8
NECAP1-222ENST00000640072 DEFB131BA0A096LNP1 70 aa3.78□□□□□ -1.8
NECAP1-222ENST00000640072 KRTAP26-1Q6PEX3 210 aa3.78□□□□□ -1.8
NECAP1-222ENST00000640072 C6orf48Q9UBA6 75 aa3.78□□□□□ -1.8
NECAP1-222ENST00000640072 NAV2Q8IVL1 2488 aa3.78□□□□□ -1.8
NECAP1-222ENST00000640072 OTOGLQ3ZCN5 2332 aa3.77□□□□□ -1.81
NECAP1-222ENST00000640072 DEFB130BP0DP73 79 aa3.77□□□□□ -1.81
NECAP1-222ENST00000640072 DEFB130AP0DP74 79 aa3.77□□□□□ -1.81
NECAP1-222ENST00000640072 C15orf56Q8N910 161 aa3.77□□□□□ -1.81
NECAP1-222ENST00000640072 TP53AIP1Q9HCN2 124 aa3.77□□□□□ -1.81
NECAP1-222ENST00000640072 FLG2Q5D862 2391 aaPredicted RBP3.77□□□□□ -1.81
NECAP1-222ENST00000640072 PIEZO2Q9H5I5 2752 aa3.77□□□□□ -1.81
NECAP1-222ENST00000640072 EYSQ5T1H1 3165 aa3.77□□□□□ -1.81
NECAP1-222ENST00000640072 PANO1I0J062 215 aa3.76□□□□□ -1.81
NECAP1-222ENST00000640072 CFAP47Q6ZTR5 3102 aa3.76□□□□□ -1.81
NECAP1-222ENST00000640072 A0A1B0GUV1 79 aa3.76□□□□□ -1.81
NECAP1-222ENST00000640072 ATRXP46100 2492 aa3.76□□□□□ -1.81
NECAP1-222ENST00000640072 KRTAP29-1A8MX34 341 aaPredicted RBP3.76□□□□□ -1.81
NECAP1-222ENST00000640072 H3BUX3 64 aa3.75□□□□□ -1.81
NECAP1-222ENST00000640072 TLN1Q9Y490 2541 aaKnown RBP3.75□□□□□ -1.81
NECAP1-222ENST00000640072 CELSR3Q9NYQ7 3312 aa3.74□□□□□ -1.81
NECAP1-222ENST00000640072 IGKV2-24A0A0C4DH68 120 aa3.74□□□□□ -1.81
NECAP1-222ENST00000640072 ZZEF1O43149 2961 aa3.74□□□□□ -1.81
NECAP1-222ENST00000640072 A0A0G2JQZ4 141 aa3.74□□□□□ -1.81
NECAP1-222ENST00000640072 A0A1W2PNN7 141 aa3.74□□□□□ -1.81
NECAP1-222ENST00000640072 FN1P02751 2386 aaKnown RBP3.73□□□□□ -1.81
NECAP1-222ENST00000640072 CRIPTQ9P021 101 aa3.73□□□□□ -1.81
NECAP1-222ENST00000640072 WWC2-AS2Q96NR7 200 aa3.72□□□□□ -1.81
NECAP1-222ENST00000640072 KALRNO60229 2985 aa3.72□□□□□ -1.81
NECAP1-222ENST00000640072 ANKHD1Q8IWZ3 2542 aaKnown RBP3.72□□□□□ -1.81
NECAP1-222ENST00000640072 DEFB109BQ30KR1 87 aa3.72□□□□□ -1.81
NECAP1-222ENST00000640072 LINC00472Q9H8W2 130 aa3.72□□□□□ -1.81
NECAP1-222ENST00000640072 IGLV7-43P04211 117 aa3.71□□□□□ -1.82
NECAP1-222ENST00000640072 ITPR1Q14643 2758 aa3.71□□□□□ -1.82
NECAP1-222ENST00000640072 A0A087WTM6 91 aa3.71□□□□□ -1.82
NECAP1-222ENST00000640072 GVQW2A0A096LPI5 108 aaPredicted RBP3.7□□□□□ -1.82
NECAP1-222ENST00000640072 IGFL1Q6UW32 110 aa3.7□□□□□ -1.82
NECAP1-222ENST00000640072 Q6ZRX8 168 aa3.7□□□□□ -1.82
NECAP1-222ENST00000640072 LINC00304Q8N9R0 145 aa3.7□□□□□ -1.82
NECAP1-222ENST00000640072 PTPN13Q12923 2485 aa3.69□□□□□ -1.82
NECAP1-222ENST00000640072 DCHS1Q96JQ0 3298 aa3.69□□□□□ -1.82
NECAP1-222ENST00000640072 KRTAP15-1Q3LI76 137 aa3.69□□□□□ -1.82
NECAP1-222ENST00000640072 C10orf99Q6UWK7 81 aa3.68□□□□□ -1.82
NECAP1-222ENST00000640072 NBDYA0A0U1RRE5 68 aa3.68□□□□□ -1.82
NECAP1-222ENST00000640072 PRO0255Q9UI72 69 aa3.68□□□□□ -1.82
NECAP1-222ENST00000640072 CCL19Q99731 98 aa3.68□□□□□ -1.82
NECAP1-222ENST00000640072 SPENQ96T58 3664 aaKnown RBP3.68□□□□□ -1.82
NECAP1-222ENST00000640072 LCE2DQ5TA82 110 aaPredicted RBP3.67□□□□□ -1.82
NECAP1-222ENST00000640072 Q96NJ1 140 aa3.67□□□□□ -1.82
NECAP1-222ENST00000640072 A0A096LNI7 61 aa3.67□□□□□ -1.82
NECAP1-222ENST00000640072 Q8N1X5 172 aa3.67□□□□□ -1.82
NECAP1-222ENST00000640072 DEFB123Q8N688 67 aa3.67□□□□□ -1.82
NECAP1-222ENST00000640072 DMDP11532 3685 aa3.66□□□□□ -1.82
NECAP1-222ENST00000640072 TACC2O95359 2948 aa3.66□□□□□ -1.82
NECAP1-222ENST00000640072 TLN2Q9Y4G6 2542 aa3.66□□□□□ -1.82
NECAP1-222ENST00000640072 MMP24-AS1A0A0U1RRL7 71 aa3.66□□□□□ -1.82
NECAP1-222ENST00000640072 SPTBN4Q9H254 2564 aa3.65□□□□□ -1.83
NECAP1-222ENST00000640072 HTN3P15516 51 aa3.65□□□□□ -1.83
NECAP1-222ENST00000640072 KRTAP3-3Q9BYR6 98 aa3.64□□□□□ -1.83
NECAP1-222ENST00000640072 KRTAP3-2Q9BYR7 98 aa3.64□□□□□ -1.83
NECAP1-222ENST00000640072 JMJD1CQ15652 2540 aa3.64□□□□□ -1.83
NECAP1-222ENST00000640072 FAM168BA1KXE4 195 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms