RNA–Protein interactions for RNA: ENST00000638883.1

NECAP1-213, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,940 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-213ENST00000638883 UBE2E2Q96LR5 201 aa4.96□□□□□ -1.62
NECAP1-213ENST00000638883 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.96□□□□□ -1.62
NECAP1-213ENST00000638883 M0R2N4 97 aa4.96□□□□□ -1.62
NECAP1-213ENST00000638883 SYCNQ0VAF6 134 aa4.95□□□□□ -1.62
NECAP1-213ENST00000638883 TEX15Q9BXT5 2789 aa4.95□□□□□ -1.62
NECAP1-213ENST00000638883 TRGV2A0A075B6R0 118 aa4.95□□□□□ -1.62
NECAP1-213ENST00000638883 A8MTW9 85 aa4.95□□□□□ -1.62
NECAP1-213ENST00000638883 FBXL19-AS1Q494R0 122 aa4.95□□□□□ -1.62
NECAP1-213ENST00000638883 Q6ZTC4 211 aa4.95□□□□□ -1.62
NECAP1-213ENST00000638883 DIRC1Q969H9 104 aa4.94□□□□□ -1.62
NECAP1-213ENST00000638883 LOC110117498A0A087WWA1 95 aa4.94□□□□□ -1.62
NECAP1-213ENST00000638883 CD164L2Q6UWJ8 174 aa4.94□□□□□ -1.62
NECAP1-213ENST00000638883 SPATA3Q8NHX4 192 aa4.94□□□□□ -1.62
NECAP1-213ENST00000638883 C3orf84H3BNL1 204 aa4.94□□□□□ -1.62
NECAP1-213ENST00000638883 LINC01006Q8NI28 216 aa4.94□□□□□ -1.62
NECAP1-213ENST00000638883 COL6A5A8TX70 2615 aa4.93□□□□□ -1.62
NECAP1-213ENST00000638883 H3BQ85 93 aa4.93□□□□□ -1.62
NECAP1-213ENST00000638883 CLPSL2Q6UWE3 100 aa4.93□□□□□ -1.62
NECAP1-213ENST00000638883 LINC00575Q6W349 94 aa4.93□□□□□ -1.62
NECAP1-213ENST00000638883 TRBV6-8A0A0A6YYG3 113 aa4.93□□□□□ -1.62
NECAP1-213ENST00000638883 TRGV4A0A0C4DH28 118 aa4.93□□□□□ -1.62
NECAP1-213ENST00000638883 C5orf56Q8N8D9 126 aa4.93□□□□□ -1.62
NECAP1-213ENST00000638883 MP68P56378 58 aa4.92□□□□□ -1.62
NECAP1-213ENST00000638883 LINC00588Q9Y4M8 146 aa4.92□□□□□ -1.62
NECAP1-213ENST00000638883 GYPEP15421 78 aa4.92□□□□□ -1.62
NECAP1-213ENST00000638883 HTN3P15516 51 aa4.92□□□□□ -1.62
NECAP1-213ENST00000638883 ATP11AUNQ6ZP68 121 aa4.92□□□□□ -1.62
NECAP1-213ENST00000638883 SACSQ9NZJ4 4579 aa4.92□□□□□ -1.62
NECAP1-213ENST00000638883 LIMD2Q9BT23 127 aa4.91□□□□□ -1.62
NECAP1-213ENST00000638883 LMO4P61968 165 aa4.91□□□□□ -1.62
NECAP1-213ENST00000638883 NDUFB1O75438 58 aa4.91□□□□□ -1.62
NECAP1-213ENST00000638883 SMIM29Q86T20 159 aa4.91□□□□□ -1.62
NECAP1-213ENST00000638883 NKAPP1Q8N9T2 125 aa4.91□□□□□ -1.62
NECAP1-213ENST00000638883 K7EMT4 169 aa4.9□□□□□ -1.62
NECAP1-213ENST00000638883 DEFB112Q30KQ8 113 aa4.9□□□□□ -1.62
NECAP1-213ENST00000638883 A8MU10 97 aa4.9□□□□□ -1.63
NECAP1-213ENST00000638883 COX7BP24311 80 aa4.9□□□□□ -1.63
NECAP1-213ENST00000638883 C7orf65Q6ZTY9 151 aa4.9□□□□□ -1.63
NECAP1-213ENST00000638883 LINC00167Q96N53 147 aa4.9□□□□□ -1.63
NECAP1-213ENST00000638883 OCR1Q9BZK8 76 aa4.9□□□□□ -1.63
NECAP1-213ENST00000638883 PSCAO43653 123 aa4.89□□□□□ -1.63
NECAP1-213ENST00000638883 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.89□□□□□ -1.63
NECAP1-213ENST00000638883 LCA10Q71F78 164 aa4.89□□□□□ -1.63
NECAP1-213ENST00000638883 DEFB105AQ8NG35 78 aa4.89□□□□□ -1.63
NECAP1-213ENST00000638883 FBN1P35555 2871 aaKnown RBP4.89□□□□□ -1.63
NECAP1-213ENST00000638883 C16orf90A8MZG2 172 aa4.89□□□□□ -1.63
NECAP1-213ENST00000638883 C8orf87E5RJ46 101 aa4.89□□□□□ -1.63
NECAP1-213ENST00000638883 IGHV4-59P01825 116 aa4.88□□□□□ -1.63
NECAP1-213ENST00000638883 VWFP04275 2813 aa4.88□□□□□ -1.63
NECAP1-213ENST00000638883 ETDCA0A1B0GVM5 59 aa4.88□□□□□ -1.63
NECAP1-213ENST00000638883 SERTAD4-AS1Q5TG53 156 aa4.88□□□□□ -1.63
NECAP1-213ENST00000638883 B9D2Q9BPU9 175 aa4.88□□□□□ -1.63
NECAP1-213ENST00000638883 KLK9Q2XQG4 91 aa4.87□□□□□ -1.63
NECAP1-213ENST00000638883 KLK12Q9UKR0 248 aa4.87□□□□□ -1.63
NECAP1-213ENST00000638883 FLNAP21333 2647 aaKnown RBP4.87□□□□□ -1.63
NECAP1-213ENST00000638883 IGLV10-54A0A075B6I4 117 aa4.87□□□□□ -1.63
NECAP1-213ENST00000638883 IGHV3OR16-9A0A0B4J2B5 98 aa4.87□□□□□ -1.63
NECAP1-213ENST00000638883 IGKV4-1P06312 121 aa4.87□□□□□ -1.63
NECAP1-213ENST00000638883 IGHV4-38-2P0DP08 117 aa4.87□□□□□ -1.63
NECAP1-213ENST00000638883 C9orf116Q5BN46 136 aaPredicted RBP4.87□□□□□ -1.63
NECAP1-213ENST00000638883 LINC00208Q96KT6 92 aa4.87□□□□□ -1.63
NECAP1-213ENST00000638883 IGLV4-60A0A075B6I1 120 aa4.87□□□□□ -1.63
NECAP1-213ENST00000638883 A0A096LNT2 108 aa4.87□□□□□ -1.63
NECAP1-213ENST00000638883 H3BUA1 57 aa4.87□□□□□ -1.63
NECAP1-213ENST00000638883 UBE2DNLQ8IWF7 75 aa4.87□□□□□ -1.63
NECAP1-213ENST00000638883 NOP10Q9NPE3 64 aaKnown RBP4.87□□□□□ -1.63
NECAP1-213ENST00000638883 IGHV4-31P0DP07 118 aa4.86□□□□□ -1.63
NECAP1-213ENST00000638883 Q5VV11 94 aa4.86□□□□□ -1.63
NECAP1-213ENST00000638883 VPREB1P12018 145 aa4.86□□□□□ -1.63
NECAP1-213ENST00000638883 C9orf66Q5T8R8 295 aa4.86□□□□□ -1.63
NECAP1-213ENST00000638883 C10orf99Q6UWK7 81 aa4.85□□□□□ -1.63
NECAP1-213ENST00000638883 LINC00959A0A1B0GUT2 108 aa4.85□□□□□ -1.63
NECAP1-213ENST00000638883 CYP4F30PQ9H0H9 118 aa4.85□□□□□ -1.63
NECAP1-213ENST00000638883 WFDC10AQ9H1F0 79 aa4.85□□□□□ -1.63
NECAP1-213ENST00000638883 LOC100131303A0A0U1RQF7 123 aa4.84□□□□□ -1.63
NECAP1-213ENST00000638883 DNAJC9-AS1A6NH13 148 aa4.84□□□□□ -1.63
NECAP1-213ENST00000638883 Q8IZM0 81 aa4.84□□□□□ -1.63
NECAP1-213ENST00000638883 C10orf25Q5T742 122 aa4.84□□□□□ -1.64
NECAP1-213ENST00000638883 SPAG11BQ08648 103 aa4.83□□□□□ -1.64
NECAP1-213ENST00000638883 WFDC13Q8IUB5 93 aa4.83□□□□□ -1.64
NECAP1-213ENST00000638883 A0A096LPF7 62 aa4.82□□□□□ -1.64
NECAP1-213ENST00000638883 COX17Q14061 63 aa4.82□□□□□ -1.64
NECAP1-213ENST00000638883 PHF5AQ7RTV0 110 aaKnown RBP4.82□□□□□ -1.64
NECAP1-213ENST00000638883 XAGE1AQ9HD64 81 aa4.82□□□□□ -1.64
NECAP1-213ENST00000638883 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.82□□□□□ -1.64
NECAP1-213ENST00000638883 KRTAP1-3Q8IUG1 177 aa4.82□□□□□ -1.64
NECAP1-213ENST00000638883 ESM1Q9NQ30 184 aa4.82□□□□□ -1.64
NECAP1-213ENST00000638883 ANGP03950 147 aaKnown RBP4.82□□□□□ -1.64
NECAP1-213ENST00000638883 CASC2Q6XLA1 102 aa4.82□□□□□ -1.64
NECAP1-213ENST00000638883 WFDC10BQ8IUB3 73 aa4.82□□□□□ -1.64
NECAP1-213ENST00000638883 DEFB116Q30KQ4 102 aa4.81□□□□□ -1.64
NECAP1-213ENST00000638883 DEFB130BP0DP73 79 aa4.81□□□□□ -1.64
NECAP1-213ENST00000638883 DEFB130AP0DP74 79 aa4.81□□□□□ -1.64
NECAP1-213ENST00000638883 HSPG2P98160 4391 aa4.81□□□□□ -1.64
NECAP1-213ENST00000638883 TENM1Q9UKZ4 2725 aa4.81□□□□□ -1.64
NECAP1-213ENST00000638883 CCL24O00175 119 aa4.8□□□□□ -1.64
NECAP1-213ENST00000638883 Q8N9P0 234 aaPredicted RBP4.8□□□□□ -1.64
NECAP1-213ENST00000638883 CDC42SE1Q9NRR8 79 aa4.8□□□□□ -1.64
NECAP1-213ENST00000638883 A6NDX4 124 aa4.79□□□□□ -1.64
NECAP1-213ENST00000638883 ST20-AS1Q8NBB2 130 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 271.2 ms