RNA–Protein interactions for RNA: ENST00000638159.1

GABRA1-220, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5 BASIC

Gene GABRA1, Length 4,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-220ENST00000638159 COX7B2Q8TF08 81 aa2.58□□□□□ -2
GABRA1-220ENST00000638159 CHCHD1Q96BP2 118 aaKnown RBP2.58□□□□□ -2
GABRA1-220ENST00000638159 J3QR89 54 aa2.57□□□□□ -2
GABRA1-220ENST00000638159 SCGB1D4Q6XE38 83 aa2.57□□□□□ -2
GABRA1-220ENST00000638159 EPPK1P58107 5090 aaKnown RBP2.57□□□□□ -2
GABRA1-220ENST00000638159 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.57□□□□□ -2
GABRA1-220ENST00000638159 H3BUT2 72 aa2.57□□□□□ -2
GABRA1-220ENST00000638159 SLPIP03973 132 aa2.57□□□□□ -2
GABRA1-220ENST00000638159 BVES-AS1Q5T3Y7 98 aa2.57□□□□□ -2
GABRA1-220ENST00000638159 SMCR5Q8TEV8 140 aa2.57□□□□□ -2
GABRA1-220ENST00000638159 A0A1B0GWB2 263 aa2.57□□□□□ -2
GABRA1-220ENST00000638159 M0QY20 66 aa2.57□□□□□ -2
GABRA1-220ENST00000638159 ZNF625Q96I27 306 aaPredicted RBP2.57□□□□□ -2
GABRA1-220ENST00000638159 TNXBP22105 4242 aa2.57□□□□□ -2
GABRA1-220ENST00000638159 C10orf25Q5T742 122 aa2.56□□□□□ -2
GABRA1-220ENST00000638159 TAX1BP3O14907 124 aa2.56□□□□□ -2
GABRA1-220ENST00000638159 HBDP02042 147 aa2.56□□□□□ -2
GABRA1-220ENST00000638159 CRIP1P50238 77 aa2.56□□□□□ -2
GABRA1-220ENST00000638159 LST1O00453 97 aa2.56□□□□□ -2
GABRA1-220ENST00000638159 FABP2P12104 132 aa2.56□□□□□ -2
GABRA1-220ENST00000638159 Q1RN00 199 aa2.56□□□□□ -2
GABRA1-220ENST00000638159 C2orf82Q6UX34 121 aa2.56□□□□□ -2
GABRA1-220ENST00000638159 Q6ZUT4 128 aa2.56□□□□□ -2
GABRA1-220ENST00000638159 SPCS1Q9Y6A9 102 aa2.56□□□□□ -2
GABRA1-220ENST00000638159 TRBV6-5A0A0K0K1A5 114 aa2.55□□□□□ -2
GABRA1-220ENST00000638159 CDC42SE2Q9NRR3 84 aa2.55□□□□□ -2
GABRA1-220ENST00000638159 IGHV3OR16-9A0A0B4J2B5 98 aa2.55□□□□□ -2
GABRA1-220ENST00000638159 D6R8Y8 96 aa2.55□□□□□ -2
GABRA1-220ENST00000638159 PRYO14603 147 aa2.55□□□□□ -2
GABRA1-220ENST00000638159 IFI27L1Q96BM0 104 aa2.55□□□□□ -2
GABRA1-220ENST00000638159 LOC107984156A0A0G2JMH3 177 aa2.54□□□□□ -2
GABRA1-220ENST00000638159 SCGB1C2P0DMR2 95 aa2.54□□□□□ -2
GABRA1-220ENST00000638159 COX8AP10176 69 aa2.54□□□□□ -2
GABRA1-220ENST00000638159 ARL17AQ8IVW1 177 aa2.54□□□□□ -2
GABRA1-220ENST00000638159 ZNF80P51504 273 aaPredicted RBP2.54□□□□□ -2
GABRA1-220ENST00000638159 C20orf166-AS1Q96NR2 134 aa2.54□□□□□ -2
GABRA1-220ENST00000638159 UBR4Q5T4S7 5183 aa2.54□□□□□ -2
GABRA1-220ENST00000638159 HSD52Q0P140 79 aa2.54□□□□□ -2
GABRA1-220ENST00000638159 HIST1H4GQ99525 98 aa2.54□□□□□ -2
GABRA1-220ENST00000638159 TMEM238C9JI98 176 aa2.53□□□□□ -2
GABRA1-220ENST00000638159 DPM2O94777 84 aa2.53□□□□□ -2
GABRA1-220ENST00000638159 SMIM13P0DJ93 91 aa2.53□□□□□ -2
GABRA1-220ENST00000638159 AMN1Q8IY45 258 aa2.53□□□□□ -2
GABRA1-220ENST00000638159 FAM168BA1KXE4 195 aa2.53□□□□□ -2
GABRA1-220ENST00000638159 C9orf118A6NHY6 69 aa2.53□□□□□ -2
GABRA1-220ENST00000638159 PSMB2P49721 201 aa2.53□□□□□ -2
GABRA1-220ENST00000638159 FAM104BQ5XKR9 115 aa2.53□□□□□ -2
GABRA1-220ENST00000638159 Q8IZM0 81 aa2.53□□□□□ -2
GABRA1-220ENST00000638159 RPL39LQ96EH5 51 aaKnown RBP2.53□□□□□ -2
GABRA1-220ENST00000638159 C20orf78Q9BR46 151 aa2.53□□□□□ -2
GABRA1-220ENST00000638159 IGLV5-45A0A087WSX0 123 aa2.53□□□□□ -2
GABRA1-220ENST00000638159 MYMXA0A1B0GTQ4 84 aa2.53□□□□□ -2
GABRA1-220ENST00000638159 SMKR1H3BMG3 65 aa2.53□□□□□ -2
GABRA1-220ENST00000638159 NDUFB1O75438 58 aa2.53□□□□□ -2
GABRA1-220ENST00000638159 LINC01545Q5VT33 79 aa2.53□□□□□ -2
GABRA1-220ENST00000638159 PLECQ15149 4684 aaKnown RBP2.53□□□□□ -2
GABRA1-220ENST00000638159 K7EP34 96 aa2.52□□□□□ -2.01
GABRA1-220ENST00000638159 NCR3O14931 201 aa2.52□□□□□ -2.01
GABRA1-220ENST00000638159 ZNF73O43830 326 aaPredicted RBP2.52□□□□□ -2.01
GABRA1-220ENST00000638159 Q96NJ1 140 aa2.52□□□□□ -2.01
GABRA1-220ENST00000638159 TLX1NBP0CAT3 122 aa2.52□□□□□ -2.01
GABRA1-220ENST00000638159 C3orf22Q8N5N4 141 aa2.52□□□□□ -2.01
GABRA1-220ENST00000638159 AMELXQ99217 191 aa2.52□□□□□ -2.01
GABRA1-220ENST00000638159 DHRS4-AS1Q9P1J3 65 aa2.52□□□□□ -2.01
GABRA1-220ENST00000638159 C6orf48Q9UBA6 75 aa2.52□□□□□ -2.01
GABRA1-220ENST00000638159 TRAV12-1A0A0B4J245 112 aa2.52□□□□□ -2.01
GABRA1-220ENST00000638159 A0A1W2PPM0 123 aa2.52□□□□□ -2.01
GABRA1-220ENST00000638159 IGKCP01834 107 aa2.52□□□□□ -2.01
GABRA1-220ENST00000638159 A0A1B0GV72 72 aa2.52□□□□□ -2.01
GABRA1-220ENST00000638159 K7ERJ3 54 aa2.52□□□□□ -2.01
GABRA1-220ENST00000638159 NTM-AS1Q6ZSK4 140 aa2.52□□□□□ -2.01
GABRA1-220ENST00000638159 C2orf91Q6ZV80 131 aa2.52□□□□□ -2.01
GABRA1-220ENST00000638159 KRTAP4-8Q9BYQ9 185 aa2.52□□□□□ -2.01
GABRA1-220ENST00000638159 HIGD1BQ9P298 99 aa2.52□□□□□ -2.01
GABRA1-220ENST00000638159 MRPL51Q4U2R6 128 aaKnown RBP2.51□□□□□ -2.01
GABRA1-220ENST00000638159 TTTY13Q9BZ97 58 aa2.51□□□□□ -2.01
GABRA1-220ENST00000638159 ERG28Q9UKR5 140 aa2.51□□□□□ -2.01
GABRA1-220ENST00000638159 CHTOPQ9Y3Y2 248 aaKnown RBP2.51□□□□□ -2.01
GABRA1-220ENST00000638159 NPYP01303 97 aa2.51□□□□□ -2.01
GABRA1-220ENST00000638159 PLNP26678 52 aa2.51□□□□□ -2.01
GABRA1-220ENST00000638159 Q9BRP9 147 aa2.51□□□□□ -2.01
GABRA1-220ENST00000638159 COX6CP09669 75 aa2.51□□□□□ -2.01
GABRA1-220ENST00000638159 RBM3P98179 157 aaKnown RBP2.51□□□□□ -2.01
GABRA1-220ENST00000638159 ETDBQ3ZM63 59 aa2.51□□□□□ -2.01
GABRA1-220ENST00000638159 LINC01561Q8N1V8 128 aa2.51□□□□□ -2.01
GABRA1-220ENST00000638159 SPRR4Q96PI1 79 aa2.51□□□□□ -2.01
GABRA1-220ENST00000638159 C11orf21Q9P2W6 132 aa2.51□□□□□ -2.01
GABRA1-220ENST00000638159 FXYD2P54710 66 aa2.5□□□□□ -2.01
GABRA1-220ENST00000638159 Q8N8P6 123 aa2.5□□□□□ -2.01
GABRA1-220ENST00000638159 H3BMG7 143 aa2.5□□□□□ -2.01
GABRA1-220ENST00000638159 PDE6GP18545 87 aa2.5□□□□□ -2.01
GABRA1-220ENST00000638159 C2orf66Q6UXQ4 117 aa2.5□□□□□ -2.01
GABRA1-220ENST00000638159 PYGO1Q9Y3Y4 419 aa2.5□□□□□ -2.01
GABRA1-220ENST00000638159 SPINK8P0C7L1 97 aa2.5□□□□□ -2.01
GABRA1-220ENST00000638159 NDUFS5O43920 106 aa2.49□□□□□ -2.01
GABRA1-220ENST00000638159 CSDC2Q9Y534 153 aaKnown RBP2.49□□□□□ -2.01
GABRA1-220ENST00000638159 APOBP04114 4563 aaKnown RBP2.49□□□□□ -2.01
GABRA1-220ENST00000638159 COX7BP24311 80 aa2.49□□□□□ -2.01
GABRA1-220ENST00000638159 HERV-K104P63124 156 aa2.49□□□□□ -2.01
GABRA1-220ENST00000638159 PLEKHB2Q96CS7 222 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms