RNA–Protein interactions for RNA: ENST00000636934.1

CLN8-211, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-211ENST00000636934 MDFIQ99750 246 aa12□□□□□ -0.49
CLN8-211ENST00000636934 APLNQ9ULZ1 77 aa12□□□□□ -0.49
CLN8-211ENST00000636934 MGAM2Q2M2H8 2515 aa11.98□□□□□ -0.49
CLN8-211ENST00000636934 DHRS4-AS1Q9P1J3 65 aa11.98□□□□□ -0.49
CLN8-211ENST00000636934 IGLV1-50A0A075B6I6 118 aa11.97□□□□□ -0.49
CLN8-211ENST00000636934 TRBV7-4A0A0J9YYF1 115 aa11.96□□□□□ -0.49
CLN8-211ENST00000636934 PSCAO43653 123 aa11.96□□□□□ -0.49
CLN8-211ENST00000636934 HIST1H4AP62805 103 aaKnown RBP11.96□□□□□ -0.49
CLN8-211ENST00000636934 C14orf177Q52M58 125 aa11.96□□□□□ -0.49
CLN8-211ENST00000636934 DNAH9Q9NYC9 4486 aa11.95□□□□□ -0.5
CLN8-211ENST00000636934 ETDCA0A1B0GVM5 59 aa11.95□□□□□ -0.5
CLN8-211ENST00000636934 ATOX1O00244 68 aa11.95□□□□□ -0.5
CLN8-211ENST00000636934 CCDC179H3BU77 68 aa11.94□□□□□ -0.5
CLN8-211ENST00000636934 CNBPP62633 177 aaKnown RBP11.94□□□□□ -0.5
CLN8-211ENST00000636934 MRPL55Q7Z7F7 128 aaKnown RBP11.94□□□□□ -0.5
CLN8-211ENST00000636934 FAM168BA1KXE4 195 aa11.93□□□□□ -0.5
CLN8-211ENST00000636934 SPRR1AP35321 89 aa11.93□□□□□ -0.5
CLN8-211ENST00000636934 Q6ZRX8 168 aa11.93□□□□□ -0.5
CLN8-211ENST00000636934 NUPR2A6NF83 97 aa11.92□□□□□ -0.5
CLN8-211ENST00000636934 RPL37AP8A6NKH3 93 aa11.92□□□□□ -0.5
CLN8-211ENST00000636934 B5MCH6 92 aa11.92□□□□□ -0.5
CLN8-211ENST00000636934 KRTAP1-5Q9BYS1 174 aa11.92□□□□□ -0.5
CLN8-211ENST00000636934 FAM19A5Q7Z5A7 132 aaPredicted RBP11.91□□□□□ -0.5
CLN8-211ENST00000636934 DYNC2H1Q8NCM8 4307 aaKnown RBP11.91□□□□□ -0.5
CLN8-211ENST00000636934 KRTAP4-16G5E9R7 235 aaPredicted RBP11.9□□□□□ -0.5
CLN8-211ENST00000636934 C16orf90A8MZG2 172 aa11.88□□□□□ -0.51
CLN8-211ENST00000636934 KRTAP7-1Q8IUC3 87 aa11.88□□□□□ -0.51
CLN8-211ENST00000636934 PKIGQ9Y2B9 76 aa11.88□□□□□ -0.51
CLN8-211ENST00000636934 Q6ZVQ6 151 aa11.87□□□□□ -0.51
CLN8-211ENST00000636934 M0R2N4 97 aa11.86□□□□□ -0.51
CLN8-211ENST00000636934 UQCRQO14949 82 aa11.86□□□□□ -0.51
CLN8-211ENST00000636934 C3orf22Q8N5N4 141 aa11.85□□□□□ -0.51
CLN8-211ENST00000636934 A0A087WVE0 104 aa11.84□□□□□ -0.51
CLN8-211ENST00000636934 REG3GQ6UW15 175 aa11.84□□□□□ -0.51
CLN8-211ENST00000636934 Q8N377 158 aa11.84□□□□□ -0.51
CLN8-211ENST00000636934 DEFB105AQ8NG35 78 aa11.84□□□□□ -0.51
CLN8-211ENST00000636934 STAB2Q8WWQ8 2551 aa11.84□□□□□ -0.51
CLN8-211ENST00000636934 CXCL6P80162 114 aa11.84□□□□□ -0.51
CLN8-211ENST00000636934 Q9BRP9 147 aa11.84□□□□□ -0.51
CLN8-211ENST00000636934 A0A096LNI7 61 aa11.82□□□□□ -0.52
CLN8-211ENST00000636934 COX7CP15954 63 aa11.82□□□□□ -0.52
CLN8-211ENST00000636934 LINC01547P58512 204 aaPredicted RBP11.82□□□□□ -0.52
CLN8-211ENST00000636934 HAMPP81172 84 aa11.82□□□□□ -0.52
CLN8-211ENST00000636934 NBDYA0A0U1RRE5 68 aa11.82□□□□□ -0.52
CLN8-211ENST00000636934 IGLV5-48A0A075B6I7 105 aa11.81□□□□□ -0.52
CLN8-211ENST00000636934 UBE2BP63146 152 aa11.8□□□□□ -0.52
CLN8-211ENST00000636934 A0A1B0GW54 56 aa11.79□□□□□ -0.52
CLN8-211ENST00000636934 IGKV2-24A0A0C4DH68 120 aa11.79□□□□□ -0.52
CLN8-211ENST00000636934 C9orf153Q5TBE3 101 aa11.79□□□□□ -0.52
CLN8-211ENST00000636934 FAM19A1Q7Z5A9 133 aa11.79□□□□□ -0.52
CLN8-211ENST00000636934 SERP2Q8N6R1 65 aa11.78□□□□□ -0.52
CLN8-211ENST00000636934 COL7A1Q02388 2944 aa11.78□□□□□ -0.52
CLN8-211ENST00000636934 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.77□□□□□ -0.53
CLN8-211ENST00000636934 BCE1O60756 84 aa11.75□□□□□ -0.53
CLN8-211ENST00000636934 A0A1W2PNN7 141 aa11.74□□□□□ -0.53
CLN8-211ENST00000636934 FUSP35637 526 aaKnown RBP eCLIP11.74□□□□□ -0.53
CLN8-211ENST00000636934 C9orf163Q8N9P6 203 aa11.74□□□□□ -0.53
CLN8-211ENST00000636934 LINC00474Q9P2X8 69 aa11.74□□□□□ -0.53
CLN8-211ENST00000636934 LRCOL1A6NCL2 159 aa11.73□□□□□ -0.53
CLN8-211ENST00000636934 ST20-AS1Q8NBB2 130 aa11.73□□□□□ -0.53
CLN8-211ENST00000636934 TNP2Q05952 138 aa11.72□□□□□ -0.53
CLN8-211ENST00000636934 NREPQ16612 68 aa11.72□□□□□ -0.53
CLN8-211ENST00000636934 CRYGAP11844 174 aa11.72□□□□□ -0.53
CLN8-211ENST00000636934 SS18L2Q9UHA2 77 aa11.72□□□□□ -0.53
CLN8-211ENST00000636934 ERC2-IT1O76042 136 aa11.71□□□□□ -0.54
CLN8-211ENST00000636934 C1orf137Q5JT78 98 aa11.7□□□□□ -0.54
CLN8-211ENST00000636934 Q6ZRN7 208 aaPredicted RBP11.69□□□□□ -0.54
CLN8-211ENST00000636934 SMIM20Q8N5G0 67 aa11.69□□□□□ -0.54
CLN8-211ENST00000636934 DNAH10Q8IVF4 4471 aa11.69□□□□□ -0.54
CLN8-211ENST00000636934 F8WEM9 126 aa11.69□□□□□ -0.54
CLN8-211ENST00000636934 PLECQ15149 4684 aaKnown RBP11.67□□□□□ -0.54
CLN8-211ENST00000636934 Q8NBF4 154 aa11.67□□□□□ -0.54
CLN8-211ENST00000636934 H0Y9J4 135 aa11.65□□□□□ -0.54
CLN8-211ENST00000636934 C3orf84H3BNL1 204 aa11.65□□□□□ -0.54
CLN8-211ENST00000636934 CHTF8P0CG12 524 aa11.64□□□□□ -0.55
CLN8-211ENST00000636934 SCXQ7RTU7 201 aa11.64□□□□□ -0.55
CLN8-211ENST00000636934 A0A1W2PNM2 257 aa11.64□□□□□ -0.55
CLN8-211ENST00000636934 PRLHP81277 87 aa11.64□□□□□ -0.55
CLN8-211ENST00000636934 PHF5AQ7RTV0 110 aaKnown RBP11.64□□□□□ -0.55
CLN8-211ENST00000636934 BPY2O14599 106 aa11.63□□□□□ -0.55
CLN8-211ENST00000636934 SPRR4Q96PI1 79 aa11.63□□□□□ -0.55
CLN8-211ENST00000636934 SMIM29Q86T20 159 aa11.62□□□□□ -0.55
CLN8-211ENST00000636934 HIGD2AQ9BW72 106 aa11.62□□□□□ -0.55
CLN8-211ENST00000636934 VPS13DQ5THJ4 4388 aa11.62□□□□□ -0.55
CLN8-211ENST00000636934 TRAV7A0A075B6U4 112 aa11.62□□□□□ -0.55
CLN8-211ENST00000636934 LYSTQ99698 3801 aa11.61□□□□□ -0.55
CLN8-211ENST00000636934 LINC00476Q8WZB0 136 aa11.59□□□□□ -0.55
CLN8-211ENST00000636934 DNAH7Q8WXX0 4024 aa11.58□□□□□ -0.56
CLN8-211ENST00000636934 IGLV8-61A0A075B6I0 122 aa11.58□□□□□ -0.56
CLN8-211ENST00000636934 CSMD3Q7Z407 3707 aa11.57□□□□□ -0.56
CLN8-211ENST00000636934 EPM2AB3EWF7 344 aa11.57□□□□□ -0.56
CLN8-211ENST00000636934 UBE2AP49459 152 aa11.57□□□□□ -0.56
CLN8-211ENST00000636934 A0A087WTM6 91 aa11.56□□□□□ -0.56
CLN8-211ENST00000636934 DPH3Q96FX2 82 aa11.56□□□□□ -0.56
CLN8-211ENST00000636934 IGKV4-1P06312 121 aa11.56□□□□□ -0.56
CLN8-211ENST00000636934 SPRR1BP22528 89 aa11.55□□□□□ -0.56
CLN8-211ENST00000636934 KRTAP11-1Q8IUC1 163 aa11.54□□□□□ -0.56
CLN8-211ENST00000636934 SPACA4Q8TDM5 124 aa11.54□□□□□ -0.56
CLN8-211ENST00000636934 Q6ZR54 194 aa11.53□□□□□ -0.56
CLN8-211ENST00000636934 IGFL1Q6UW32 110 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms