RNA–Protein interactions for RNA: ENST00000636769.1

SCN2A-213, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 8,573 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-213ENST00000636769 LUZP6Q538Z0 58 aa4□□□□□ -1.77
SCN2A-213ENST00000636769 LINC00612Q8N6U2 182 aa4□□□□□ -1.77
SCN2A-213ENST00000636769 FN1P02751 2386 aaKnown RBP4□□□□□ -1.77
SCN2A-213ENST00000636769 Q96NJ1 140 aa4□□□□□ -1.77
SCN2A-213ENST00000636769 LINC00588Q9Y4M8 146 aa4□□□□□ -1.77
SCN2A-213ENST00000636769 USP9XQ93008 2570 aaPredicted RBP4□□□□□ -1.77
SCN2A-213ENST00000636769 KRTAP10-9P60411 292 aa3.99□□□□□ -1.77
SCN2A-213ENST00000636769 USP9YO00507 2555 aaPredicted RBP3.99□□□□□ -1.77
SCN2A-213ENST00000636769 CSNK1G2-AS1Q8NCQ2 148 aa3.99□□□□□ -1.77
SCN2A-213ENST00000636769 IGLV5-37A0A075B6J1 123 aa3.98□□□□□ -1.77
SCN2A-213ENST00000636769 DMAC1Q96GE9 116 aa3.98□□□□□ -1.77
SCN2A-213ENST00000636769 APLNQ9ULZ1 77 aa3.98□□□□□ -1.77
SCN2A-213ENST00000636769 Q5VV11 94 aa3.98□□□□□ -1.77
SCN2A-213ENST00000636769 DSCR10P59022 87 aa3.97□□□□□ -1.77
SCN2A-213ENST00000636769 PKD1L2Q7Z442 2459 aa3.97□□□□□ -1.77
SCN2A-213ENST00000636769 C9orf163Q8N9P6 203 aa3.97□□□□□ -1.77
SCN2A-213ENST00000636769 TYMSOSQ8TAI1 123 aa3.97□□□□□ -1.77
SCN2A-213ENST00000636769 FAM168BA1KXE4 195 aa3.97□□□□□ -1.77
SCN2A-213ENST00000636769 PLA2G1BP04054 148 aaKnown RBP3.97□□□□□ -1.77
SCN2A-213ENST00000636769 ABCA12Q86UK0 2595 aa3.96□□□□□ -1.78
SCN2A-213ENST00000636769 NBDYA0A0U1RRE5 68 aa3.96□□□□□ -1.78
SCN2A-213ENST00000636769 PRR26Q8N8Z3 221 aa3.96□□□□□ -1.78
SCN2A-213ENST00000636769 RTL8CO15255 209 aa3.96□□□□□ -1.78
SCN2A-213ENST00000636769 CYSTM1Q9H1C7 97 aa3.96□□□□□ -1.78
SCN2A-213ENST00000636769 FAM229BQ4G0N7 80 aa3.96□□□□□ -1.78
SCN2A-213ENST00000636769 ZNF861PO60384 105 aa3.95□□□□□ -1.78
SCN2A-213ENST00000636769 ANKRD11Q6UB99 2663 aaPredicted RBP3.95□□□□□ -1.78
SCN2A-213ENST00000636769 A0A0A0MQY5 61 aa3.95□□□□□ -1.78
SCN2A-213ENST00000636769 ZFYVE26Q68DK2 2539 aa3.94□□□□□ -1.78
SCN2A-213ENST00000636769 TLN2Q9Y4G6 2542 aa3.93□□□□□ -1.78
SCN2A-213ENST00000636769 COL4A2P08572 1712 aa3.93□□□□□ -1.78
SCN2A-213ENST00000636769 OXTP01178 125 aa3.93□□□□□ -1.78
SCN2A-213ENST00000636769 A0A096LNT2 108 aa3.93□□□□□ -1.78
SCN2A-213ENST00000636769 LRRK2Q5S007 2527 aa3.93□□□□□ -1.78
SCN2A-213ENST00000636769 A0A1B0GU33 70 aa3.93□□□□□ -1.78
SCN2A-213ENST00000636769 CHTF8P0CG12 524 aa3.92□□□□□ -1.78
SCN2A-213ENST00000636769 ZNF575Q86XF7 245 aa3.92□□□□□ -1.78
SCN2A-213ENST00000636769 JMJD1CQ15652 2540 aa3.92□□□□□ -1.78
SCN2A-213ENST00000636769 CNBPP62633 177 aaKnown RBP3.91□□□□□ -1.78
SCN2A-213ENST00000636769 SETD2Q9BYW2 2564 aaPredicted RBP3.91□□□□□ -1.78
SCN2A-213ENST00000636769 PRAC1Q96KF2 57 aa3.91□□□□□ -1.78
SCN2A-213ENST00000636769 FLG2Q5D862 2391 aaPredicted RBP3.91□□□□□ -1.78
SCN2A-213ENST00000636769 CHD8Q9HCK8 2581 aa3.91□□□□□ -1.78
SCN2A-213ENST00000636769 GIG44P09565 113 aaPredicted RBP3.91□□□□□ -1.78
SCN2A-213ENST00000636769 COL27A1Q8IZC6 1860 aaPredicted RBP3.9□□□□□ -1.79
SCN2A-213ENST00000636769 HRES1P13985 223 aa3.89□□□□□ -1.79
SCN2A-213ENST00000636769 SMR3AQ99954 134 aa3.89□□□□□ -1.79
SCN2A-213ENST00000636769 CSAG1Q6PB30 78 aa3.89□□□□□ -1.79
SCN2A-213ENST00000636769 C19orf73Q9NVV2 129 aa3.89□□□□□ -1.79
SCN2A-213ENST00000636769 MMP24-AS1A0A0U1RRL7 71 aa3.89□□□□□ -1.79
SCN2A-213ENST00000636769 LINC00304Q8N9R0 145 aa3.88□□□□□ -1.79
SCN2A-213ENST00000636769 MTORP42345 2549 aa3.88□□□□□ -1.79
SCN2A-213ENST00000636769 A0A0G2JQZ4 141 aa3.88□□□□□ -1.79
SCN2A-213ENST00000636769 A0A1W2PNN7 141 aa3.88□□□□□ -1.79
SCN2A-213ENST00000636769 PCNTO95613 3336 aa3.87□□□□□ -1.79
SCN2A-213ENST00000636769 SPINK7P58062 85 aa3.87□□□□□ -1.79
SCN2A-213ENST00000636769 ACANP16112 2415 aa3.87□□□□□ -1.79
SCN2A-213ENST00000636769 IGLV7-43P04211 117 aa3.86□□□□□ -1.79
SCN2A-213ENST00000636769 PCSK5Q92824 1860 aa3.86□□□□□ -1.79
SCN2A-213ENST00000636769 SPRR1AP35321 89 aa3.85□□□□□ -1.79
SCN2A-213ENST00000636769 POLQO75417 2590 aa3.85□□□□□ -1.79
SCN2A-213ENST00000636769 Q8N1X5 172 aa3.85□□□□□ -1.79
SCN2A-213ENST00000636769 LINC00483Q53H64 154 aa3.85□□□□□ -1.79
SCN2A-213ENST00000636769 A0A0D9SG42 100 aa3.85□□□□□ -1.79
SCN2A-213ENST00000636769 SPRR1BP22528 89 aa3.85□□□□□ -1.79
SCN2A-213ENST00000636769 WDR87Q6ZQQ6 2873 aa3.84□□□□□ -1.79
SCN2A-213ENST00000636769 EPG5Q9HCE0 2579 aa3.84□□□□□ -1.8
SCN2A-213ENST00000636769 SPTBN4Q9H254 2564 aa3.84□□□□□ -1.8
SCN2A-213ENST00000636769 A0A087X002 238 aa3.83□□□□□ -1.8
SCN2A-213ENST00000636769 TNP2Q05952 138 aa3.83□□□□□ -1.8
SCN2A-213ENST00000636769 LINC00472Q9H8W2 130 aa3.83□□□□□ -1.8
SCN2A-213ENST00000636769 PSORS1C2Q9UIG4 136 aa3.83□□□□□ -1.8
SCN2A-213ENST00000636769 ZCCHC13Q8WW36 166 aaKnown RBP3.82□□□□□ -1.8
SCN2A-213ENST00000636769 CENPFP49454 3210 aa3.82□□□□□ -1.8
SCN2A-213ENST00000636769 A6NN06 94 aa3.81□□□□□ -1.8
SCN2A-213ENST00000636769 A0A087WTM6 91 aa3.81□□□□□ -1.8
SCN2A-213ENST00000636769 ROMO1P60602 79 aa3.8□□□□□ -1.8
SCN2A-213ENST00000636769 KRTAP16-1A8MUX0 517 aa3.8□□□□□ -1.8
SCN2A-213ENST00000636769 SPATA8Q6RVD6 105 aa3.79□□□□□ -1.8
SCN2A-213ENST00000636769 Q6ZR54 194 aa3.79□□□□□ -1.8
SCN2A-213ENST00000636769 Q5W150 140 aa3.79□□□□□ -1.8
SCN2A-213ENST00000636769 RPL37P61927 97 aaKnown RBP3.78□□□□□ -1.8
SCN2A-213ENST00000636769 FASNP49327 2511 aaKnown RBP3.78□□□□□ -1.8
SCN2A-213ENST00000636769 C9orf92A6NGG3 77 aa3.77□□□□□ -1.81
SCN2A-213ENST00000636769 ANAPC11Q9NYG5 84 aa3.77□□□□□ -1.81
SCN2A-213ENST00000636769 LCE6AA0A183 80 aa3.77□□□□□ -1.81
SCN2A-213ENST00000636769 Q8NDZ9 215 aa3.76□□□□□ -1.81
SCN2A-213ENST00000636769 KRTAP29-1A8MX34 341 aaPredicted RBP3.76□□□□□ -1.81
SCN2A-213ENST00000636769 CR1P17927 2039 aa3.76□□□□□ -1.81
SCN2A-213ENST00000636769 CASC10Q5T4H9 136 aa3.76□□□□□ -1.81
SCN2A-213ENST00000636769 KRTAP24-1Q3LI83 254 aa3.75□□□□□ -1.81
SCN2A-213ENST00000636769 DNAH12Q6ZR08 3092 aa3.75□□□□□ -1.81
SCN2A-213ENST00000636769 HTTP42858 3142 aa3.74□□□□□ -1.81
SCN2A-213ENST00000636769 COX6B2Q6YFQ2 88 aa3.74□□□□□ -1.81
SCN2A-213ENST00000636769 MKI67P46013 3256 aaKnown RBP3.74□□□□□ -1.81
SCN2A-213ENST00000636769 CAMK2N1Q7Z7J9 78 aa3.74□□□□□ -1.81
SCN2A-213ENST00000636769 H1FX-AS1Q4G0G2 97 aa3.74□□□□□ -1.81
SCN2A-213ENST00000636769 KRTAP10-11P60412 298 aa3.72□□□□□ -1.81
SCN2A-213ENST00000636769 KRTAP25-1Q3LHN0 102 aa3.72□□□□□ -1.81
SCN2A-213ENST00000636769 KRTAP26-1Q6PEX3 210 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms