RNA–Protein interactions for RNA: ENST00000636443.1

SYNGAP1-215, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 79 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-215ENST00000636443 C9orf62Q8N4C0 152 aa0.58□□□□□ -2.32
SYNGAP1-215ENST00000636443 SMIM4Q8WVI0 70 aa0.58□□□□□ -2.32
SYNGAP1-215ENST00000636443 FAM104AQ969W3 186 aa0.58□□□□□ -2.32
SYNGAP1-215ENST00000636443 AMELXQ99217 191 aa0.58□□□□□ -2.32
SYNGAP1-215ENST00000636443 DHRS4-AS1Q9P1J3 65 aa0.58□□□□□ -2.32
SYNGAP1-215ENST00000636443 S4R3F8 94 aa0.58□□□□□ -2.32
SYNGAP1-215ENST00000636443 A0A0J9YXY3 114 aa0.57□□□□□ -2.32
SYNGAP1-215ENST00000636443 H3BRM9 83 aa0.57□□□□□ -2.32
SYNGAP1-215ENST00000636443 MBP02144 154 aa0.57□□□□□ -2.32
SYNGAP1-215ENST00000636443 MEIG1Q5JSS6 88 aa0.57□□□□□ -2.32
SYNGAP1-215ENST00000636443 PAPPA-AS1Q5QFB9 102 aa0.57□□□□□ -2.32
SYNGAP1-215ENST00000636443 KRTAP5-5Q701N2 237 aaPredicted RBP0.57□□□□□ -2.32
SYNGAP1-215ENST00000636443 AMN1Q8IY45 258 aa0.57□□□□□ -2.32
SYNGAP1-215ENST00000636443 TOMM5Q8N4H5 51 aa0.57□□□□□ -2.32
SYNGAP1-215ENST00000636443 TCEAL7Q9BRU2 100 aa0.57□□□□□ -2.32
SYNGAP1-215ENST00000636443 PSMG3Q9BT73 122 aaPredicted RBP0.57□□□□□ -2.32
SYNGAP1-215ENST00000636443 S100A14Q9HCY8 104 aa0.57□□□□□ -2.32
SYNGAP1-215ENST00000636443 SS18L2Q9UHA2 77 aa0.57□□□□□ -2.32
SYNGAP1-215ENST00000636443 IGHV6-1A0A0B4J1U7 121 aa0.56□□□□□ -2.32
SYNGAP1-215ENST00000636443 A0A1B0GV50 99 aa0.56□□□□□ -2.32
SYNGAP1-215ENST00000636443 PAGE4O60829 102 aa0.56□□□□□ -2.32
SYNGAP1-215ENST00000636443 NDUFB6O95139 128 aa0.56□□□□□ -2.32
SYNGAP1-215ENST00000636443 C3orf79P0CE67 100 aa0.56□□□□□ -2.32
SYNGAP1-215ENST00000636443 RAB4AP20338 218 aa0.56□□□□□ -2.32
SYNGAP1-215ENST00000636443 CKS2P33552 79 aa0.56□□□□□ -2.32
SYNGAP1-215ENST00000636443 GNG4P50150 75 aa0.56□□□□□ -2.32
SYNGAP1-215ENST00000636443 RPL23P62829 140 aaKnown RBP0.56□□□□□ -2.32
SYNGAP1-215ENST00000636443 NEDD8Q15843 81 aa0.56□□□□□ -2.32
SYNGAP1-215ENST00000636443 CENPWQ5EE01 88 aa0.56□□□□□ -2.32
SYNGAP1-215ENST00000636443 KRTAP5-1Q6L8H4 278 aa0.56□□□□□ -2.32
SYNGAP1-215ENST00000636443 C2orf66Q6UXQ4 117 aa0.56□□□□□ -2.32
SYNGAP1-215ENST00000636443 COMMD7Q86VX2 200 aa0.56□□□□□ -2.32
SYNGAP1-215ENST00000636443 SLC7A5P1Q8MH63 180 aa0.56□□□□□ -2.32
SYNGAP1-215ENST00000636443 CLEC2BQ92478 149 aa0.56□□□□□ -2.32
SYNGAP1-215ENST00000636443 MIEN1Q9BRT3 115 aa0.56□□□□□ -2.32
SYNGAP1-215ENST00000636443 CNFNQ9BYD5 112 aa0.56□□□□□ -2.32
SYNGAP1-215ENST00000636443 C10orf95Q9H7T3 257 aa0.56□□□□□ -2.32
SYNGAP1-215ENST00000636443 BIN3Q9NQY0 253 aa0.56□□□□□ -2.32
SYNGAP1-215ENST00000636443 CYSLTR1Q9Y271 337 aa0.56□□□□□ -2.32
SYNGAP1-215ENST00000636443 CBY1Q9Y3M2 126 aa0.56□□□□□ -2.32
SYNGAP1-215ENST00000636443 HSPB11Q9Y547 144 aa0.56□□□□□ -2.32
SYNGAP1-215ENST00000636443 CTXND1A0A1B0GTU2 59 aa0.55□□□□□ -2.32
SYNGAP1-215ENST00000636443 MAP1LC3B2A6NCE7 125 aa0.55□□□□□ -2.32
SYNGAP1-215ENST00000636443 ZNF815PA8K554 130 aa0.55□□□□□ -2.32
SYNGAP1-215ENST00000636443 TEX46H3BTG2 121 aa0.55□□□□□ -2.32
SYNGAP1-215ENST00000636443 IGKV4-1P06312 121 aa0.55□□□□□ -2.32
SYNGAP1-215ENST00000636443 SMIM13P0DJ93 91 aa0.55□□□□□ -2.32
SYNGAP1-215ENST00000636443 COX7BP24311 80 aa0.55□□□□□ -2.32
SYNGAP1-215ENST00000636443 ATP6V0CP27449 155 aa0.55□□□□□ -2.32
SYNGAP1-215ENST00000636443 LINC01554Q52M75 96 aa0.55□□□□□ -2.32
SYNGAP1-215ENST00000636443 Q6JHZ5 121 aa0.55□□□□□ -2.32
SYNGAP1-215ENST00000636443 SFTA2Q6UW10 78 aa0.55□□□□□ -2.32
SYNGAP1-215ENST00000636443 MIR7-3HGQ8N6C7 128 aa0.55□□□□□ -2.32
SYNGAP1-215ENST00000636443 OR13C6PQ8NH95 151 aa0.55□□□□□ -2.32
SYNGAP1-215ENST00000636443 KRTAP4-12Q9BQ66 201 aa0.55□□□□□ -2.32
SYNGAP1-215ENST00000636443 C20orf78Q9BR46 151 aa0.55□□□□□ -2.32
SYNGAP1-215ENST00000636443 KRTAP9-4Q9BYQ2 154 aa0.55□□□□□ -2.32
SYNGAP1-215ENST00000636443 MAP1LC3BQ9GZQ8 125 aa0.55□□□□□ -2.32
SYNGAP1-215ENST00000636443 SPANXB1Q9NS25 103 aaPredicted RBP0.55□□□□□ -2.32
SYNGAP1-215ENST00000636443 TRBV24-1A0A075B6N3 115 aa0.54□□□□□ -2.32
SYNGAP1-215ENST00000636443 IGKV2D-30A0A075B6S6 120 aa0.54□□□□□ -2.32
SYNGAP1-215ENST00000636443 TRAV13-2A0A0B4J235 113 aa0.54□□□□□ -2.32
SYNGAP1-215ENST00000636443 IGKV3D-7A0A0C4DH55 119 aa0.54□□□□□ -2.32
SYNGAP1-215ENST00000636443 TRBV10-2A0A0K0K1G8 114 aa0.54□□□□□ -2.32
SYNGAP1-215ENST00000636443 A0A1B0GUT8 65 aa0.54□□□□□ -2.32
SYNGAP1-215ENST00000636443 TINCRA0A1B0GVN0 87 aa0.54□□□□□ -2.32
SYNGAP1-215ENST00000636443 NAP1L6A6NFF2 107 aa0.54□□□□□ -2.32
SYNGAP1-215ENST00000636443 HMSDA8MTL9 139 aa0.54□□□□□ -2.32
SYNGAP1-215ENST00000636443 IGKV2-30P06310 120 aa0.54□□□□□ -2.32
SYNGAP1-215ENST00000636443 H2AFB1P0C5Y9 115 aa0.54□□□□□ -2.32
SYNGAP1-215ENST00000636443 PET100P0DJ07 73 aa0.54□□□□□ -2.32
SYNGAP1-215ENST00000636443 MRPL51Q4U2R6 128 aaKnown RBP0.54□□□□□ -2.32
SYNGAP1-215ENST00000636443 PYDC2Q56P42 97 aa0.54□□□□□ -2.32
SYNGAP1-215ENST00000636443 Q5BKY6 102 aa0.54□□□□□ -2.32
SYNGAP1-215ENST00000636443 AKR1C8PQ5T2L2 129 aa0.54□□□□□ -2.32
SYNGAP1-215ENST00000636443 SFT2D1Q8WV19 159 aa0.54□□□□□ -2.32
SYNGAP1-215ENST00000636443 MAP1LC3CQ9BXW4 147 aa0.54□□□□□ -2.32
SYNGAP1-215ENST00000636443 MRPL18Q9H0U6 180 aaKnown RBP0.54□□□□□ -2.32
SYNGAP1-215ENST00000636443 KRTAP9-6A8MVA2 160 aa0.53□□□□□ -2.32
SYNGAP1-215ENST00000636443 K7EQZ3 153 aa0.53□□□□□ -2.32
SYNGAP1-215ENST00000636443 GATCO43716 136 aaKnown RBP0.53□□□□□ -2.32
SYNGAP1-215ENST00000636443 NPYP01303 97 aa0.53□□□□□ -2.32
SYNGAP1-215ENST00000636443 NMUP48645 174 aa0.53□□□□□ -2.32
SYNGAP1-215ENST00000636443 SERF2P84101 59 aa0.53□□□□□ -2.32
SYNGAP1-215ENST00000636443 RIGQ13278 110 aa0.53□□□□□ -2.32
SYNGAP1-215ENST00000636443 ZNF726P1Q15940 193 aa0.53□□□□□ -2.32
SYNGAP1-215ENST00000636443 C4orf26Q17RF5 130 aa0.53□□□□□ -2.32
SYNGAP1-215ENST00000636443 KRTAP19-5Q3LI72 72 aa0.53□□□□□ -2.32
SYNGAP1-215ENST00000636443 KCNRGQ8N5I3 272 aa0.53□□□□□ -2.32
SYNGAP1-215ENST00000636443 MT1LQ93083 61 aa0.53□□□□□ -2.32
SYNGAP1-215ENST00000636443 R4GN34 69 aa0.53□□□□□ -2.32
SYNGAP1-215ENST00000636443 IGLV5-48A0A075B6I7 105 aa0.52□□□□□ -2.33
SYNGAP1-215ENST00000636443 IGLV5-45A0A087WSX0 123 aa0.52□□□□□ -2.33
SYNGAP1-215ENST00000636443 LINC00862A6NCI5 91 aa0.52□□□□□ -2.33
SYNGAP1-215ENST00000636443 CENPXA8MT69 81 aa0.52□□□□□ -2.33
SYNGAP1-215ENST00000636443 HIGD1CA8MV81 97 aa0.52□□□□□ -2.33
SYNGAP1-215ENST00000636443 P0C880 135 aa0.52□□□□□ -2.33
SYNGAP1-215ENST00000636443 ELOF1P60002 83 aaKnown RBP0.52□□□□□ -2.33
SYNGAP1-215ENST00000636443 NPC2P61916 151 aa0.52□□□□□ -2.33
SYNGAP1-215ENST00000636443 IL15RAQ13261 267 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms