RNA–Protein interactions for RNA: ENST00000636120.1

PDE4D-228, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 6,659 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-228ENST00000636120 LINC00304Q8N9R0 145 aa4.17□□□□□ -1.74
PDE4D-228ENST00000636120 FAM104AQ969W3 186 aa4.17□□□□□ -1.74
PDE4D-228ENST00000636120 SPRR4Q96PI1 79 aa4.16□□□□□ -1.74
PDE4D-228ENST00000636120 ATP11AUNQ6ZP68 121 aa4.16□□□□□ -1.74
PDE4D-228ENST00000636120 CD164Q04900 197 aa4.16□□□□□ -1.74
PDE4D-228ENST00000636120 CENPFP49454 3210 aa4.16□□□□□ -1.74
PDE4D-228ENST00000636120 CEP295Q9C0D2 2601 aa4.16□□□□□ -1.74
PDE4D-228ENST00000636120 ABCA2Q9BZC7 2435 aa4.15□□□□□ -1.74
PDE4D-228ENST00000636120 KLKP1Q107X0 134 aa4.15□□□□□ -1.74
PDE4D-228ENST00000636120 IGLV5-48A0A075B6I7 105 aa4.15□□□□□ -1.74
PDE4D-228ENST00000636120 CASC10Q5T4H9 136 aa4.15□□□□□ -1.75
PDE4D-228ENST00000636120 PSORS1C2Q9UIG4 136 aa4.14□□□□□ -1.75
PDE4D-228ENST00000636120 PKD1L2Q7Z442 2459 aa4.13□□□□□ -1.75
PDE4D-228ENST00000636120 C4orf26Q17RF5 130 aa4.13□□□□□ -1.75
PDE4D-228ENST00000636120 DSCR10P59022 87 aa4.12□□□□□ -1.75
PDE4D-228ENST00000636120 ABCA12Q86UK0 2595 aa4.12□□□□□ -1.75
PDE4D-228ENST00000636120 COA5Q86WW8 74 aa4.12□□□□□ -1.75
PDE4D-228ENST00000636120 A0A1W2PNM2 257 aa4.12□□□□□ -1.75
PDE4D-228ENST00000636120 CYP4F30PQ9H0H9 118 aa4.12□□□□□ -1.75
PDE4D-228ENST00000636120 MYO9AB2RTY4 2548 aa4.11□□□□□ -1.75
PDE4D-228ENST00000636120 MYO18BQ8IUG5 2567 aa4.11□□□□□ -1.75
PDE4D-228ENST00000636120 CHD7Q9P2D1 2997 aa4.1□□□□□ -1.75
PDE4D-228ENST00000636120 CHD9Q3L8U1 2897 aa4.1□□□□□ -1.75
PDE4D-228ENST00000636120 C2CD3Q4AC94 2353 aa4.1□□□□□ -1.75
PDE4D-228ENST00000636120 USP9XQ93008 2570 aaPredicted RBP4.1□□□□□ -1.75
PDE4D-228ENST00000636120 SPANXA2-OT1Q8N9U9 137 aa4.1□□□□□ -1.75
PDE4D-228ENST00000636120 SPTBN4Q9H254 2564 aa4.1□□□□□ -1.75
PDE4D-228ENST00000636120 J3QL48 77 aa4.09□□□□□ -1.76
PDE4D-228ENST00000636120 H7BZZ5 65 aa4.07□□□□□ -1.76
PDE4D-228ENST00000636120 FAM229BQ4G0N7 80 aa4.07□□□□□ -1.76
PDE4D-228ENST00000636120 TRANK1O15050 2925 aa4.07□□□□□ -1.76
PDE4D-228ENST00000636120 SPRR1AP35321 89 aa4.07□□□□□ -1.76
PDE4D-228ENST00000636120 PLAC8Q9NZF1 115 aa4.07□□□□□ -1.76
PDE4D-228ENST00000636120 CHD8Q9HCK8 2581 aa4.07□□□□□ -1.76
PDE4D-228ENST00000636120 UTRNP46939 3433 aa4.07□□□□□ -1.76
PDE4D-228ENST00000636120 HTTP42858 3142 aa4.07□□□□□ -1.76
PDE4D-228ENST00000636120 FN1P02751 2386 aaKnown RBP4.06□□□□□ -1.76
PDE4D-228ENST00000636120 A0A0G2JQZ4 141 aa4.06□□□□□ -1.76
PDE4D-228ENST00000636120 TLN2Q9Y4G6 2542 aa4.06□□□□□ -1.76
PDE4D-228ENST00000636120 ANAPC11Q9NYG5 84 aa4.05□□□□□ -1.76
PDE4D-228ENST00000636120 TNP2Q05952 138 aa4.05□□□□□ -1.76
PDE4D-228ENST00000636120 SPINT4Q6UDR6 99 aa4.05□□□□□ -1.76
PDE4D-228ENST00000636120 UQCR11O14957 56 aa4.04□□□□□ -1.76
PDE4D-228ENST00000636120 USP9YO00507 2555 aaPredicted RBP4.04□□□□□ -1.76
PDE4D-228ENST00000636120 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.04□□□□□ -1.76
PDE4D-228ENST00000636120 C9orf92A6NGG3 77 aa4.04□□□□□ -1.76
PDE4D-228ENST00000636120 SMR3BP02814 79 aaPredicted RBP4.03□□□□□ -1.76
PDE4D-228ENST00000636120 IGLV8-61A0A075B6I0 122 aa4.03□□□□□ -1.76
PDE4D-228ENST00000636120 OCR1Q9BZK8 76 aa4.03□□□□□ -1.76
PDE4D-228ENST00000636120 SPRR1BP22528 89 aa4.03□□□□□ -1.76
PDE4D-228ENST00000636120 KRTAP26-1Q6PEX3 210 aa4.03□□□□□ -1.76
PDE4D-228ENST00000636120 C5orf42Q9H799 3197 aa4.02□□□□□ -1.77
PDE4D-228ENST00000636120 A8MUN3 132 aa4.02□□□□□ -1.77
PDE4D-228ENST00000636120 RBM12B-AS1Q9P1G2 102 aa4.01□□□□□ -1.77
PDE4D-228ENST00000636120 JMJD1CQ15652 2540 aa4.01□□□□□ -1.77
PDE4D-228ENST00000636120 Q8NDZ9 215 aa4□□□□□ -1.77
PDE4D-228ENST00000636120 POLQO75417 2590 aa4□□□□□ -1.77
PDE4D-228ENST00000636120 ZFYVE26Q68DK2 2539 aa4□□□□□ -1.77
PDE4D-228ENST00000636120 MIR22HGQ0VDD5 57 aa4□□□□□ -1.77
PDE4D-228ENST00000636120 LCA10Q71F78 164 aa3.99□□□□□ -1.77
PDE4D-228ENST00000636120 KTN1-AS1Q86SY8 53 aa3.99□□□□□ -1.77
PDE4D-228ENST00000636120 CEP350Q5VT06 3117 aa3.99□□□□□ -1.77
PDE4D-228ENST00000636120 FASNP49327 2511 aaKnown RBP3.98□□□□□ -1.77
PDE4D-228ENST00000636120 COX6B2Q6YFQ2 88 aa3.97□□□□□ -1.77
PDE4D-228ENST00000636120 IGLV7-46A0A075B6I9 117 aa3.97□□□□□ -1.77
PDE4D-228ENST00000636120 MMP24-AS1A0A0U1RRL7 71 aa3.97□□□□□ -1.77
PDE4D-228ENST00000636120 Q1T7F1 81 aa3.97□□□□□ -1.77
PDE4D-228ENST00000636120 LINC00483Q53H64 154 aa3.96□□□□□ -1.78
PDE4D-228ENST00000636120 ACANP16112 2415 aa3.96□□□□□ -1.78
PDE4D-228ENST00000636120 F8P00451 2351 aa3.96□□□□□ -1.78
PDE4D-228ENST00000636120 KRTAP1-5Q9BYS1 174 aa3.95□□□□□ -1.78
PDE4D-228ENST00000636120 MTORP42345 2549 aa3.95□□□□□ -1.78
PDE4D-228ENST00000636120 PRR26Q8N8Z3 221 aa3.95□□□□□ -1.78
PDE4D-228ENST00000636120 LINC00472Q9H8W2 130 aa3.95□□□□□ -1.78
PDE4D-228ENST00000636120 A0A0A0MQY5 61 aa3.93□□□□□ -1.78
PDE4D-228ENST00000636120 CDC42SE1Q9NRR8 79 aa3.93□□□□□ -1.78
PDE4D-228ENST00000636120 ZCCHC13Q8WW36 166 aaKnown RBP3.93□□□□□ -1.78
PDE4D-228ENST00000636120 LCE6AA0A183 80 aa3.92□□□□□ -1.78
PDE4D-228ENST00000636120 Q8N1X5 172 aa3.92□□□□□ -1.78
PDE4D-228ENST00000636120 KRTAP4-16G5E9R7 235 aaPredicted RBP3.92□□□□□ -1.78
PDE4D-228ENST00000636120 HRES1P13985 223 aa3.91□□□□□ -1.78
PDE4D-228ENST00000636120 Q6ZSA8 131 aa3.91□□□□□ -1.78
PDE4D-228ENST00000636120 SETD2Q9BYW2 2564 aaPredicted RBP3.9□□□□□ -1.78
PDE4D-228ENST00000636120 Q6ZR54 194 aa3.9□□□□□ -1.79
PDE4D-228ENST00000636120 FLNAP21333 2647 aaKnown RBP3.9□□□□□ -1.79
PDE4D-228ENST00000636120 CRIPTQ9P021 101 aa3.9□□□□□ -1.79
PDE4D-228ENST00000636120 Q75L30 129 aa3.89□□□□□ -1.79
PDE4D-228ENST00000636120 Q5W150 140 aa3.88□□□□□ -1.79
PDE4D-228ENST00000636120 LINC01558Q9Y6Z2 57 aa3.88□□□□□ -1.79
PDE4D-228ENST00000636120 KRTAP10-1P60331 282 aa3.88□□□□□ -1.79
PDE4D-228ENST00000636120 LINC01554Q52M75 96 aa3.87□□□□□ -1.79
PDE4D-228ENST00000636120 ITPR3Q14573 2671 aa3.87□□□□□ -1.79
PDE4D-228ENST00000636120 EPG5Q9HCE0 2579 aa3.86□□□□□ -1.79
PDE4D-228ENST00000636120 ZNF292O60281 2723 aa3.86□□□□□ -1.79
PDE4D-228ENST00000636120 KRTAP10-2P60368 255 aa3.86□□□□□ -1.79
PDE4D-228ENST00000636120 Q5VSD8 79 aa3.85□□□□□ -1.79
PDE4D-228ENST00000636120 FP248Q71RG6 208 aaPredicted RBP3.85□□□□□ -1.79
PDE4D-228ENST00000636120 S4R3F8 94 aa3.85□□□□□ -1.79
PDE4D-228ENST00000636120 PRRC2CQ9Y520 2896 aaKnown RBP3.84□□□□□ -1.79
PDE4D-228ENST00000636120 MKI67P46013 3256 aaKnown RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms