RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-222ENST00000636022 HERVK_113P63121 156 aa4.39□□□□□ -1.71
CACNA1A-222ENST00000636022 ETDBQ3ZM63 59 aa4.39□□□□□ -1.71
CACNA1A-222ENST00000636022 C6orf226Q5I0X4 101 aa4.39□□□□□ -1.71
CACNA1A-222ENST00000636022 PAPPA-AS1Q5QFB9 102 aa4.39□□□□□ -1.71
CACNA1A-222ENST00000636022 TOMM7Q9P0U1 55 aa4.39□□□□□ -1.71
CACNA1A-222ENST00000636022 IGLV1-50A0A075B6I6 118 aa4.38□□□□□ -1.71
CACNA1A-222ENST00000636022 LINC01546A6NGU7 62 aa4.38□□□□□ -1.71
CACNA1A-222ENST00000636022 F8VRH5 84 aa4.38□□□□□ -1.71
CACNA1A-222ENST00000636022 J3KT08 172 aa4.38□□□□□ -1.71
CACNA1A-222ENST00000636022 SMIM13P0DJ93 91 aa4.38□□□□□ -1.71
CACNA1A-222ENST00000636022 LINC01545Q5VT33 79 aa4.38□□□□□ -1.71
CACNA1A-222ENST00000636022 FAM19A2Q8N3H0 131 aa4.38□□□□□ -1.71
CACNA1A-222ENST00000636022 URB1-AS1Q96HZ7 61 aa4.38□□□□□ -1.71
CACNA1A-222ENST00000636022 C22orf24Q9Y442 160 aa4.38□□□□□ -1.71
CACNA1A-222ENST00000636022 IGLV5-45A0A087WSX0 123 aa4.37□□□□□ -1.71
CACNA1A-222ENST00000636022 SMIM1B2RUZ4 78 aa4.37□□□□□ -1.71
CACNA1A-222ENST00000636022 C9JAW5 83 aa4.37□□□□□ -1.71
CACNA1A-222ENST00000636022 ZNF861PO60384 105 aa4.37□□□□□ -1.71
CACNA1A-222ENST00000636022 IFITM1P13164 125 aa4.37□□□□□ -1.71
CACNA1A-222ENST00000636022 MEIG1Q5JSS6 88 aa4.37□□□□□ -1.71
CACNA1A-222ENST00000636022 XAGE1AQ9HD64 81 aa4.37□□□□□ -1.71
CACNA1A-222ENST00000636022 HIGD1BQ9P298 99 aa4.37□□□□□ -1.71
CACNA1A-222ENST00000636022 TINCRA0A1B0GVN0 87 aa4.36□□□□□ -1.71
CACNA1A-222ENST00000636022 CXCL5P42830 114 aa4.36□□□□□ -1.71
CACNA1A-222ENST00000636022 PPDPFLQ8WWR9 84 aa4.36□□□□□ -1.71
CACNA1A-222ENST00000636022 SCGB3A1Q96QR1 104 aa4.36□□□□□ -1.71
CACNA1A-222ENST00000636022 FAT4Q6V0I7 4981 aa4.35□□□□□ -1.71
CACNA1A-222ENST00000636022 LINC01549A6NIU2 74 aa4.35□□□□□ -1.71
CACNA1A-222ENST00000636022 HSBP1O75506 76 aa4.35□□□□□ -1.71
CACNA1A-222ENST00000636022 RPL13AP40429 203 aaKnown RBP4.35□□□□□ -1.71
CACNA1A-222ENST00000636022 NMUP48645 174 aa4.35□□□□□ -1.71
CACNA1A-222ENST00000636022 MRPL55Q7Z7F7 128 aaKnown RBP4.35□□□□□ -1.71
CACNA1A-222ENST00000636022 COX7B2Q8TF08 81 aa4.35□□□□□ -1.71
CACNA1A-222ENST00000636022 CHCHD1Q96BP2 118 aaKnown RBP4.35□□□□□ -1.71
CACNA1A-222ENST00000636022 A0A1B0GWB2 263 aa4.34□□□□□ -1.71
CACNA1A-222ENST00000636022 BCE1O60756 84 aa4.34□□□□□ -1.71
CACNA1A-222ENST00000636022 Q5XG85 94 aa4.34□□□□□ -1.71
CACNA1A-222ENST00000636022 LINC00167Q96N53 147 aa4.34□□□□□ -1.71
CACNA1A-222ENST00000636022 SPANXDQ9BXN6 97 aa4.34□□□□□ -1.71
CACNA1A-222ENST00000636022 MUC17Q685J3 4493 aa4.33□□□□□ -1.72
CACNA1A-222ENST00000636022 IGLV5-37A0A075B6J1 123 aa4.33□□□□□ -1.72
CACNA1A-222ENST00000636022 A0A087X002 238 aa4.33□□□□□ -1.72
CACNA1A-222ENST00000636022 RPL37AP8A6NKH3 93 aa4.33□□□□□ -1.72
CACNA1A-222ENST00000636022 PMVKQ15126 192 aa4.33□□□□□ -1.72
CACNA1A-222ENST00000636022 KRTAP13-1Q8IUC0 172 aa4.33□□□□□ -1.72
CACNA1A-222ENST00000636022 RAB37Q96AX2 223 aa4.33□□□□□ -1.72
CACNA1A-222ENST00000636022 A0A096LNJ9 63 aa4.32□□□□□ -1.72
CACNA1A-222ENST00000636022 IGLV5-39A0A0G2JS06 123 aa4.32□□□□□ -1.72
CACNA1A-222ENST00000636022 RPL28P46779 137 aaKnown RBP4.32□□□□□ -1.72
CACNA1A-222ENST00000636022 TAL2Q16559 108 aa4.32□□□□□ -1.72
CACNA1A-222ENST00000636022 TEN1Q86WV5 123 aa4.32□□□□□ -1.72
CACNA1A-222ENST00000636022 PRO0628Q9UI54 55 aa4.32□□□□□ -1.72
CACNA1A-222ENST00000636022 TRBV20-1A0A075B6N2 111 aa4.31□□□□□ -1.72
CACNA1A-222ENST00000636022 LEPROTL1O95214 131 aa4.31□□□□□ -1.72
CACNA1A-222ENST00000636022 FXYD2P54710 66 aa4.31□□□□□ -1.72
CACNA1A-222ENST00000636022 ATP5LO75964 103 aa4.3□□□□□ -1.72
CACNA1A-222ENST00000636022 CRYGAP11844 174 aa4.3□□□□□ -1.72
CACNA1A-222ENST00000636022 PRR4Q16378 134 aa4.3□□□□□ -1.72
CACNA1A-222ENST00000636022 C3orf22Q8N5N4 141 aa4.3□□□□□ -1.72
CACNA1A-222ENST00000636022 KRTAP4-7Q9BYR0 210 aa4.3□□□□□ -1.72
CACNA1A-222ENST00000636022 TRBV7-7A0A0K0K1E9 115 aa4.29□□□□□ -1.72
CACNA1A-222ENST00000636022 ZNF22P17026 224 aaPredicted RBP4.29□□□□□ -1.72
CACNA1A-222ENST00000636022 PFN2P35080 140 aa4.29□□□□□ -1.72
CACNA1A-222ENST00000636022 KRTAP13-2Q52LG2 175 aa4.29□□□□□ -1.72
CACNA1A-222ENST00000636022 LCE1DQ5T752 114 aa4.29□□□□□ -1.72
CACNA1A-222ENST00000636022 CEND1Q8N111 149 aa4.29□□□□□ -1.72
CACNA1A-222ENST00000636022 NKAPP1Q8N9T2 125 aa4.29□□□□□ -1.72
CACNA1A-222ENST00000636022 ANAPC11Q9NYG5 84 aa4.29□□□□□ -1.72
CACNA1A-222ENST00000636022 IGKV2-28A0A075B6P5 120 aa4.28□□□□□ -1.72
CACNA1A-222ENST00000636022 SNCGO76070 127 aa4.28□□□□□ -1.72
CACNA1A-222ENST00000636022 IGKV2D-28P01615 120 aa4.28□□□□□ -1.72
CACNA1A-222ENST00000636022 VPREB1P12018 145 aa4.28□□□□□ -1.72
CACNA1A-222ENST00000636022 C4orf26Q17RF5 130 aa4.28□□□□□ -1.72
CACNA1A-222ENST00000636022 FAM229BQ4G0N7 80 aa4.28□□□□□ -1.72
CACNA1A-222ENST00000636022 Q8NDZ9 215 aa4.28□□□□□ -1.72
CACNA1A-222ENST00000636022 TYMSOSQ8TAI1 123 aa4.28□□□□□ -1.72
CACNA1A-222ENST00000636022 SND1-IT1Q9HBX3 110 aa4.28□□□□□ -1.72
CACNA1A-222ENST00000636022 V9GYY9 64 aa4.28□□□□□ -1.72
CACNA1A-222ENST00000636022 C11orf86A6NJI1 115 aa4.27□□□□□ -1.73
CACNA1A-222ENST00000636022 UQCRQO14949 82 aa4.27□□□□□ -1.73
CACNA1A-222ENST00000636022 HBDP02042 147 aa4.27□□□□□ -1.73
CACNA1A-222ENST00000636022 UBE2AP49459 152 aa4.27□□□□□ -1.73
CACNA1A-222ENST00000636022 COX17Q14061 63 aa4.27□□□□□ -1.73
CACNA1A-222ENST00000636022 IMUPQ9GZP8 106 aa4.27□□□□□ -1.73
CACNA1A-222ENST00000636022 K7ERJ3 54 aa4.26□□□□□ -1.73
CACNA1A-222ENST00000636022 M0R378 163 aa4.26□□□□□ -1.73
CACNA1A-222ENST00000636022 HRCT1Q6UXD1 115 aa4.26□□□□□ -1.73
CACNA1A-222ENST00000636022 ZNF625Q96I27 306 aaPredicted RBP4.26□□□□□ -1.73
CACNA1A-222ENST00000636022 PRLHP81277 87 aa4.25□□□□□ -1.73
CACNA1A-222ENST00000636022 SFTA2Q6UW10 78 aa4.25□□□□□ -1.73
CACNA1A-222ENST00000636022 PCP2Q8IVA1 136 aa4.25□□□□□ -1.73
CACNA1A-222ENST00000636022 PLEKHB2Q96CS7 222 aa4.25□□□□□ -1.73
CACNA1A-222ENST00000636022 A0A0U1RRA0 63 aa4.24□□□□□ -1.73
CACNA1A-222ENST00000636022 TMEM170BQ5T4T1 132 aa4.24□□□□□ -1.73
CACNA1A-222ENST00000636022 C9orf153Q5TBE3 101 aa4.24□□□□□ -1.73
CACNA1A-222ENST00000636022 FAM19A1Q7Z5A9 133 aa4.24□□□□□ -1.73
CACNA1A-222ENST00000636022 LINC00304Q8N9R0 145 aa4.24□□□□□ -1.73
CACNA1A-222ENST00000636022 NHP2Q9NX24 153 aaKnown RBP4.24□□□□□ -1.73
CACNA1A-222ENST00000636022 TRAV12-1A0A0B4J245 112 aa4.23□□□□□ -1.73
CACNA1A-222ENST00000636022 FAM240AA0A1B0GVK7 77 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms