RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 Q6ZRP5 223 aa9.72□□□□□ -0.85
CACNA1A-220ENST00000635988 Q8N377 158 aa9.72□□□□□ -0.85
CACNA1A-220ENST00000635988 NKAPP1Q8N9T2 125 aa9.72□□□□□ -0.85
CACNA1A-220ENST00000635988 Q6ZTC4 211 aa9.71□□□□□ -0.86
CACNA1A-220ENST00000635988 DHRS4-AS1Q9P1J3 65 aa9.71□□□□□ -0.86
CACNA1A-220ENST00000635988 NBEAL2Q6ZNJ1 2754 aa9.7□□□□□ -0.86
CACNA1A-220ENST00000635988 DEFB105AQ8NG35 78 aa9.7□□□□□ -0.86
CACNA1A-220ENST00000635988 HIGD2AQ9BW72 106 aa9.69□□□□□ -0.86
CACNA1A-220ENST00000635988 SYCNQ0VAF6 134 aa9.68□□□□□ -0.86
CACNA1A-220ENST00000635988 LCE6AA0A183 80 aa9.67□□□□□ -0.86
CACNA1A-220ENST00000635988 FAM229BQ4G0N7 80 aa9.67□□□□□ -0.86
CACNA1A-220ENST00000635988 C7orf33Q8WU49 177 aa9.66□□□□□ -0.86
CACNA1A-220ENST00000635988 SMIM29Q86T20 159 aa9.66□□□□□ -0.86
CACNA1A-220ENST00000635988 MPLKIPQ8TAP9 179 aa9.65□□□□□ -0.86
CACNA1A-220ENST00000635988 Q6ZRX8 168 aa9.64□□□□□ -0.87
CACNA1A-220ENST00000635988 PLA2G2DQ9UNK4 145 aa9.64□□□□□ -0.87
CACNA1A-220ENST00000635988 MTORP42345 2549 aa9.64□□□□□ -0.87
CACNA1A-220ENST00000635988 A0A1W2PNM2 257 aa9.64□□□□□ -0.87
CACNA1A-220ENST00000635988 C1orf137Q5JT78 98 aa9.63□□□□□ -0.87
CACNA1A-220ENST00000635988 Q8NBF4 154 aa9.63□□□□□ -0.87
CACNA1A-220ENST00000635988 FAM30AQ9NZY2 134 aa9.63□□□□□ -0.87
CACNA1A-220ENST00000635988 TNP2Q05952 138 aa9.63□□□□□ -0.87
CACNA1A-220ENST00000635988 HIVEP2P31629 2446 aa9.63□□□□□ -0.87
CACNA1A-220ENST00000635988 IGKV2D-24A0A075B6R9 120 aa9.62□□□□□ -0.87
CACNA1A-220ENST00000635988 SERTAD4-AS1Q5TG53 156 aa9.62□□□□□ -0.87
CACNA1A-220ENST00000635988 TLX1NBP0CAT3 122 aa9.62□□□□□ -0.87
CACNA1A-220ENST00000635988 LINC01556Q5JQF7 62 aa9.62□□□□□ -0.87
CACNA1A-220ENST00000635988 USP24Q9UPU5 2620 aa9.61□□□□□ -0.87
CACNA1A-220ENST00000635988 SPRR4Q96PI1 79 aa9.61□□□□□ -0.87
CACNA1A-220ENST00000635988 OXLD1Q5BKU9 147 aa9.61□□□□□ -0.87
CACNA1A-220ENST00000635988 ACANP16112 2415 aa9.61□□□□□ -0.87
CACNA1A-220ENST00000635988 ETDCA0A1B0GVM5 59 aa9.6□□□□□ -0.87
CACNA1A-220ENST00000635988 ANK3Q12955 4377 aaKnown RBP9.6□□□□□ -0.87
CACNA1A-220ENST00000635988 hDV103S1A0JD37 113 aa9.6□□□□□ -0.87
CACNA1A-220ENST00000635988 KRTAP4-16G5E9R7 235 aaPredicted RBP9.6□□□□□ -0.87
CACNA1A-220ENST00000635988 SPRR1AP35321 89 aa9.59□□□□□ -0.87
CACNA1A-220ENST00000635988 IGLV5-37A0A075B6J1 123 aa9.59□□□□□ -0.87
CACNA1A-220ENST00000635988 Q9BRP9 147 aa9.59□□□□□ -0.87
CACNA1A-220ENST00000635988 IGLV1-50A0A075B6I6 118 aa9.58□□□□□ -0.88
CACNA1A-220ENST00000635988 ZCCHC13Q8WW36 166 aaKnown RBP9.58□□□□□ -0.88
CACNA1A-220ENST00000635988 SMR3AQ99954 134 aa9.57□□□□□ -0.88
CACNA1A-220ENST00000635988 DSCR10P59022 87 aa9.57□□□□□ -0.88
CACNA1A-220ENST00000635988 RPL37AP8A6NKH3 93 aa9.55□□□□□ -0.88
CACNA1A-220ENST00000635988 Q1T7F1 81 aa9.54□□□□□ -0.88
CACNA1A-220ENST00000635988 PDZD2O15018 2839 aa9.54□□□□□ -0.88
CACNA1A-220ENST00000635988 ST20-AS1Q8NBB2 130 aa9.53□□□□□ -0.88
CACNA1A-220ENST00000635988 K7EQZ3 153 aa9.53□□□□□ -0.88
CACNA1A-220ENST00000635988 C1orf64Q8NEQ6 169 aa9.53□□□□□ -0.88
CACNA1A-220ENST00000635988 HCG22E2RYF7 251 aa9.52□□□□□ -0.88
CACNA1A-220ENST00000635988 CYP4F30PQ9H0H9 118 aa9.52□□□□□ -0.89
CACNA1A-220ENST00000635988 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.51□□□□□ -0.89
CACNA1A-220ENST00000635988 NDUFB1O75438 58 aa9.51□□□□□ -0.89
CACNA1A-220ENST00000635988 PRR15Q8IV56 129 aa9.51□□□□□ -0.89
CACNA1A-220ENST00000635988 DNAH10OSP0CZ25 163 aa9.51□□□□□ -0.89
CACNA1A-220ENST00000635988 UBE2BP63146 152 aa9.5□□□□□ -0.89
CACNA1A-220ENST00000635988 RETNQ9HD89 108 aa9.49□□□□□ -0.89
CACNA1A-220ENST00000635988 FAM168BA1KXE4 195 aa9.49□□□□□ -0.89
CACNA1A-220ENST00000635988 MRPL55Q7Z7F7 128 aaKnown RBP9.49□□□□□ -0.89
CACNA1A-220ENST00000635988 C4orf48Q5BLP8 95 aa9.48□□□□□ -0.89
CACNA1A-220ENST00000635988 DEFB131BA0A096LNP1 70 aa9.48□□□□□ -0.89
CACNA1A-220ENST00000635988 VWFP04275 2813 aa9.47□□□□□ -0.89
CACNA1A-220ENST00000635988 PSCAO43653 123 aa9.47□□□□□ -0.89
CACNA1A-220ENST00000635988 PMAIP1Q13794 54 aa9.47□□□□□ -0.89
CACNA1A-220ENST00000635988 LINC00476Q8WZB0 136 aa9.46□□□□□ -0.89
CACNA1A-220ENST00000635988 MP68P56378 58 aa9.45□□□□□ -0.9
CACNA1A-220ENST00000635988 REG3GQ6UW15 175 aa9.45□□□□□ -0.9
CACNA1A-220ENST00000635988 KRTAP7-1Q8IUC3 87 aa9.45□□□□□ -0.9
CACNA1A-220ENST00000635988 LRCOL1A6NCL2 159 aa9.44□□□□□ -0.9
CACNA1A-220ENST00000635988 INAFM1C9JVW0 142 aa9.44□□□□□ -0.9
CACNA1A-220ENST00000635988 C11orf45Q8TAV5 145 aa9.43□□□□□ -0.9
CACNA1A-220ENST00000635988 IGFL1Q6UW32 110 aa9.42□□□□□ -0.9
CACNA1A-220ENST00000635988 HIVEP1P15822 2718 aa9.41□□□□□ -0.9
CACNA1A-220ENST00000635988 IGLV8-61A0A075B6I0 122 aa9.4□□□□□ -0.9
CACNA1A-220ENST00000635988 NOTCH2Q04721 2471 aa9.4□□□□□ -0.9
CACNA1A-220ENST00000635988 TRAV22A0A0B4J277 110 aa9.4□□□□□ -0.91
CACNA1A-220ENST00000635988 H3BPC8 53 aa9.39□□□□□ -0.91
CACNA1A-220ENST00000635988 J3QKU1 62 aa9.38□□□□□ -0.91
CACNA1A-220ENST00000635988 WFDC13Q8IUB5 93 aa9.38□□□□□ -0.91
CACNA1A-220ENST00000635988 KRTAP10-11P60412 298 aa9.37□□□□□ -0.91
CACNA1A-220ENST00000635988 PRR4Q16378 134 aa9.37□□□□□ -0.91
CACNA1A-220ENST00000635988 CASC10Q5T4H9 136 aa9.37□□□□□ -0.91
CACNA1A-220ENST00000635988 SPANXA2-OT1Q8N9U9 137 aa9.37□□□□□ -0.91
CACNA1A-220ENST00000635988 UNC79Q9P2D8 2635 aa9.36□□□□□ -0.91
CACNA1A-220ENST00000635988 A0A087WSZ3 146 aa9.36□□□□□ -0.91
CACNA1A-220ENST00000635988 PSPHP1O15172 72 aa9.36□□□□□ -0.91
CACNA1A-220ENST00000635988 B9D2Q9BPU9 175 aa9.36□□□□□ -0.91
CACNA1A-220ENST00000635988 ITPR2Q14571 2701 aa9.35□□□□□ -0.91
CACNA1A-220ENST00000635988 LINC00208Q96KT6 92 aa9.35□□□□□ -0.91
CACNA1A-220ENST00000635988 KRTAP29-1A8MX34 341 aaPredicted RBP9.35□□□□□ -0.91
CACNA1A-220ENST00000635988 LINC00588Q9Y4M8 146 aa9.35□□□□□ -0.91
CACNA1A-220ENST00000635988 DEFB116Q30KQ4 102 aa9.34□□□□□ -0.91
CACNA1A-220ENST00000635988 TENM4Q6N022 2769 aa9.33□□□□□ -0.92
CACNA1A-220ENST00000635988 A0A0G2JQZ4 141 aa9.33□□□□□ -0.92
CACNA1A-220ENST00000635988 A0A1W2PNN7 141 aa9.33□□□□□ -0.92
CACNA1A-220ENST00000635988 CASC2Q6XLA1 102 aa9.32□□□□□ -0.92
CACNA1A-220ENST00000635988 H0Y9P7 68 aa9.31□□□□□ -0.92
CACNA1A-220ENST00000635988 UBE2AP49459 152 aa9.3□□□□□ -0.92
CACNA1A-220ENST00000635988 PRLHP81277 87 aa9.3□□□□□ -0.92
CACNA1A-220ENST00000635988 CD164Q04900 197 aa9.3□□□□□ -0.92
CACNA1A-220ENST00000635988 TENM1Q9UKZ4 2725 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms