RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 LINC00158P58513 81 aa1.37□□□□□ -2.19
PSPC1-208ENST00000635562 RPL37P61927 97 aaKnown RBP1.37□□□□□ -2.19
PSPC1-208ENST00000635562 LINC00575Q6W349 94 aa1.37□□□□□ -2.19
PSPC1-208ENST00000635562 Q8IZM0 81 aa1.37□□□□□ -2.19
PSPC1-208ENST00000635562 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.37□□□□□ -2.192e-23■■■■■ 173.4
PSPC1-208ENST00000635562 PIEZO2Q9H5I5 2752 aa1.36□□□□□ -2.19
PSPC1-208ENST00000635562 PRB1P04280 392 aa1.36□□□□□ -2.19
PSPC1-208ENST00000635562 LINC00308Q8TCZ7 52 aa1.36□□□□□ -2.19
PSPC1-208ENST00000635562 SMIM2Q9BVW6 85 aa1.36□□□□□ -2.19
PSPC1-208ENST00000635562 CNFNQ9BYD5 112 aa1.36□□□□□ -2.19
PSPC1-208ENST00000635562 CDKN2A-AS1Q9UH64 79 aa1.36□□□□□ -2.19
PSPC1-208ENST00000635562 BAHCC1Q9P281 2608 aa1.35□□□□□ -2.19
PSPC1-208ENST00000635562 TRIOBPQ9H2D6 2365 aa1.35□□□□□ -2.19
PSPC1-208ENST00000635562 ZDBF2Q9HCK1 2354 aa1.34□□□□□ -2.19
PSPC1-208ENST00000635562 NDUFA1O15239 70 aa1.34□□□□□ -2.19
PSPC1-208ENST00000635562 TFF3Q07654 80 aa1.34□□□□□ -2.19
PSPC1-208ENST00000635562 KRTAP13-4Q3LI77 160 aa1.34□□□□□ -2.19
PSPC1-208ENST00000635562 PRO3102Q9H379 93 aa1.34□□□□□ -2.19
PSPC1-208ENST00000635562 CACNA1EQ15878 2313 aa1.34□□□□□ -2.2
PSPC1-208ENST00000635562 SORL1Q92673 2214 aa1.34□□□□□ -2.2
PSPC1-208ENST00000635562 NAV3Q8IVL0 2385 aa1.33□□□□□ -2.2
PSPC1-208ENST00000635562 LOC730098B7Z3J9 87 aa1.33□□□□□ -2.2
PSPC1-208ENST00000635562 LYNX1G3V0Z9 82 aa1.33□□□□□ -2.2
PSPC1-208ENST00000635562 UBE2DNLQ8IWF7 75 aa1.33□□□□□ -2.2
PSPC1-208ENST00000635562 ALMS1Q8TCU4 4167 aa1.33□□□□□ -2.2
PSPC1-208ENST00000635562 I3L2K1 104 aa1.32□□□□□ -2.2
PSPC1-208ENST00000635562 K7EQZ3 153 aa1.32□□□□□ -2.2
PSPC1-208ENST00000635562 COX6B2Q6YFQ2 88 aa1.32□□□□□ -2.2
PSPC1-208ENST00000635562 DEFB123Q8N688 67 aa1.32□□□□□ -2.2
PSPC1-208ENST00000635562 CRIPTQ9P021 101 aa1.32□□□□□ -2.2
PSPC1-208ENST00000635562 FAM208BQ5VWN6 2430 aa1.32□□□□□ -2.2
PSPC1-208ENST00000635562 CACNA1BQ00975 2339 aa1.32□□□□□ -2.2
PSPC1-208ENST00000635562 PTPRQQ9UMZ3 2332 aa1.31□□□□□ -2.2
PSPC1-208ENST00000635562 LYNX1P0DP58 116 aa1.31□□□□□ -2.2
PSPC1-208ENST00000635562 HMCN1Q96RW7 5635 aa1.31□□□□□ -2.2
PSPC1-208ENST00000635562 JMJD1CQ15652 2540 aa1.31□□□□□ -2.2
PSPC1-208ENST00000635562 DOPEY2Q9Y3R5 2298 aa1.3□□□□□ -2.2
PSPC1-208ENST00000635562 DEFB103AP81534 67 aa1.3□□□□□ -2.2
PSPC1-208ENST00000635562 MRPL34Q9BQ48 92 aaKnown RBP1.3□□□□□ -2.2
PSPC1-208ENST00000635562 H0YAA0 97 aa1.29□□□□□ -2.2
PSPC1-208ENST00000635562 IAPPP10997 89 aa1.29□□□□□ -2.2
PSPC1-208ENST00000635562 USMG5Q96IX5 58 aa1.29□□□□□ -2.2
PSPC1-208ENST00000635562 PDE4DIPQ5VU43 2346 aa1.29□□□□□ -2.2
PSPC1-208ENST00000635562 COL6A6A6NMZ7 2263 aa1.28□□□□□ -2.2
PSPC1-208ENST00000635562 PRB3Q04118 309 aaPredicted RBP1.28□□□□□ -2.2
PSPC1-208ENST00000635562 PCOTHQ58A44 107 aa1.28□□□□□ -2.2
PSPC1-208ENST00000635562 TP53AIP1Q9HCN2 124 aa1.28□□□□□ -2.2
PSPC1-208ENST00000635562 K7EIL1 84 aa1.27□□□□□ -2.21
PSPC1-208ENST00000635562 CCL22O00626 93 aa1.27□□□□□ -2.21
PSPC1-208ENST00000635562 ARHGAP5-AS1Q96IT6 56 aa1.27□□□□□ -2.21
PSPC1-208ENST00000635562 FLG2Q5D862 2391 aaPredicted RBP1.27□□□□□ -2.21
PSPC1-208ENST00000635562 COX6A2Q02221 97 aa1.26□□□□□ -2.21
PSPC1-208ENST00000635562 PIGYQ3MUY2 71 aa1.26□□□□□ -2.21
PSPC1-208ENST00000635562 MINOS1Q5TGZ0 78 aa1.26□□□□□ -2.21
PSPC1-208ENST00000635562 FBN1P35555 2871 aaKnown RBP1.26□□□□□ -2.21
PSPC1-208ENST00000635562 OTOGLQ3ZCN5 2332 aa1.26□□□□□ -2.21
PSPC1-208ENST00000635562 IGF2RP11717 2491 aa1.25□□□□□ -2.21
PSPC1-208ENST00000635562 CNTRLQ7Z7A1 2325 aa1.25□□□□□ -2.21
PSPC1-208ENST00000635562 C6orf48Q9UBA6 75 aa1.25□□□□□ -2.21
PSPC1-208ENST00000635562 BRD3OSQ6XYD6 125 aa1.24□□□□□ -2.21
PSPC1-208ENST00000635562 Q6ZSA8 131 aa1.24□□□□□ -2.21
PSPC1-208ENST00000635562 C10orf95Q9H7T3 257 aa1.24□□□□□ -2.21
PSPC1-208ENST00000635562 KNL1Q8NG31 2342 aa1.23□□□□□ -2.21
PSPC1-208ENST00000635562 POLR2KP53803 58 aaKnown RBP1.23□□□□□ -2.21
PSPC1-208ENST00000635562 KRTAP21-2Q3LI59 83 aa1.23□□□□□ -2.21
PSPC1-208ENST00000635562 LELP1Q5T871 98 aa1.23□□□□□ -2.21
PSPC1-208ENST00000635562 LINC01590Q5TEZ4 76 aa1.23□□□□□ -2.21
PSPC1-208ENST00000635562 RPS27LQ71UM5 84 aaKnown RBP1.23□□□□□ -2.21
PSPC1-208ENST00000635562 PTPRZ1P23471 2315 aaPredicted RBP1.22□□□□□ -2.21
PSPC1-208ENST00000635562 IGLV5-48A0A075B6I7 105 aa1.22□□□□□ -2.21
PSPC1-208ENST00000635562 RPS27P42677 84 aaKnown RBP1.22□□□□□ -2.21
PSPC1-208ENST00000635562 ZNF462Q96JM2 2506 aa1.22□□□□□ -2.21
PSPC1-208ENST00000635562 PLCE1Q9P212 2302 aa1.21□□□□□ -2.22
PSPC1-208ENST00000635562 TTTY10Q9BZA0 68 aa1.21□□□□□ -2.22
PSPC1-208ENST00000635562 RPL39P62891 51 aaKnown RBP1.2□□□□□ -2.22
PSPC1-208ENST00000635562 KRTAP6-3Q3LI67 103 aa1.2□□□□□ -2.22
PSPC1-208ENST00000635562 H1FX-AS1Q4G0G2 97 aa1.2□□□□□ -2.22
PSPC1-208ENST00000635562 WFDC13Q8IUB5 93 aa1.2□□□□□ -2.22
PSPC1-208ENST00000635562 TPRP12270 2363 aaKnown RBP1.19□□□□□ -2.22
PSPC1-208ENST00000635562 SPRR1AP35321 89 aa1.19□□□□□ -2.22
PSPC1-208ENST00000635562 KRTAP12-1P59990 96 aa1.19□□□□□ -2.22
PSPC1-208ENST00000635562 Q5VSD8 79 aa1.19□□□□□ -2.22
PSPC1-208ENST00000635562 HIVEP2P31629 2446 aa1.18□□□□□ -2.22
PSPC1-208ENST00000635562 DEFB130BP0DP73 79 aa1.18□□□□□ -2.22
PSPC1-208ENST00000635562 DEFB130AP0DP74 79 aa1.18□□□□□ -2.22
PSPC1-208ENST00000635562 WFDC10BQ8IUB3 73 aa1.18□□□□□ -2.22
PSPC1-208ENST00000635562 RPL39LQ96EH5 51 aaKnown RBP1.18□□□□□ -2.22
PSPC1-208ENST00000635562 PRO0255Q9UI72 69 aa1.17□□□□□ -2.22
PSPC1-208ENST00000635562 REV3LO60673 3130 aa1.16□□□□□ -2.22
PSPC1-208ENST00000635562 DSPP15924 2871 aaKnown RBP1.16□□□□□ -2.22
PSPC1-208ENST00000635562 ASH1LQ9NR48 2969 aaKnown RBP1.16□□□□□ -2.22
PSPC1-208ENST00000635562 KRTAP13-1Q8IUC0 172 aa1.16□□□□□ -2.22
PSPC1-208ENST00000635562 USF3Q68DE3 2245 aa1.16□□□□□ -2.22
PSPC1-208ENST00000635562 A0A0C4DFX4 3053 aa1.15□□□□□ -2.22
PSPC1-208ENST00000635562 PCNX1Q96RV3 2341 aa1.15□□□□□ -2.23
PSPC1-208ENST00000635562 MMP24-AS1A0A0U1RRL7 71 aa1.15□□□□□ -2.23
PSPC1-208ENST00000635562 DEFB131AP59861 70 aa1.15□□□□□ -2.23
PSPC1-208ENST00000635562 WT1-ASQ06250 92 aa1.15□□□□□ -2.23
PSPC1-208ENST00000635562 DEFB119Q8N690 84 aa1.15□□□□□ -2.23
PSPC1-208ENST00000635562 DEFB105AQ8NG35 78 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms