RNA–Protein interactions for RNA: ENST00000633813.1

LINC00254-202, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-202ENST00000633813 SND1-IT1Q9HBX3 110 aa3.57□□□□□ -1.84
LINC00254-202ENST00000633813 NHP2Q9NX24 153 aaKnown RBP3.57□□□□□ -1.84
LINC00254-202ENST00000633813 TENM2Q9NT68 2774 aa3.57□□□□□ -1.84
LINC00254-202ENST00000633813 A0A0B4J2C4 111 aa3.56□□□□□ -1.84
LINC00254-202ENST00000633813 LOC107984640A0A0U1RRK4 108 aa3.56□□□□□ -1.84
LINC00254-202ENST00000633813 LCE6AA0A183 80 aa3.56□□□□□ -1.84
LINC00254-202ENST00000633813 NDUFC2O95298 119 aa3.56□□□□□ -1.84
LINC00254-202ENST00000633813 C9orf163Q8N9P6 203 aa3.56□□□□□ -1.84
LINC00254-202ENST00000633813 PRO1854Q9UHT4 67 aa3.56□□□□□ -1.84
LINC00254-202ENST00000633813 PKIGQ9Y2B9 76 aa3.56□□□□□ -1.84
LINC00254-202ENST00000633813 PLECQ15149 4684 aaKnown RBP3.56□□□□□ -1.84
LINC00254-202ENST00000633813 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.55□□□□□ -1.84
LINC00254-202ENST00000633813 FAM168BA1KXE4 195 aa3.55□□□□□ -1.84
LINC00254-202ENST00000633813 RAB37Q96AX2 223 aa3.55□□□□□ -1.84
LINC00254-202ENST00000633813 IGKV2-28A0A075B6P5 120 aa3.54□□□□□ -1.84
LINC00254-202ENST00000633813 TRAV13-2A0A0B4J235 113 aa3.54□□□□□ -1.84
LINC00254-202ENST00000633813 C16orf90A8MZG2 172 aa3.54□□□□□ -1.84
LINC00254-202ENST00000633813 K7ERJ3 54 aa3.54□□□□□ -1.84
LINC00254-202ENST00000633813 TAX1BP3O14907 124 aa3.54□□□□□ -1.84
LINC00254-202ENST00000633813 RTL8CO15255 209 aa3.54□□□□□ -1.84
LINC00254-202ENST00000633813 IGKV2D-28P01615 120 aa3.54□□□□□ -1.84
LINC00254-202ENST00000633813 RPL18AQ02543 176 aaKnown RBP3.54□□□□□ -1.84
LINC00254-202ENST00000633813 LCE3EQ5T5B0 92 aa3.54□□□□□ -1.84
LINC00254-202ENST00000633813 XAGE1AQ9HD64 81 aa3.54□□□□□ -1.84
LINC00254-202ENST00000633813 DNAH1Q9P2D7 4330 aa3.54□□□□□ -1.84
LINC00254-202ENST00000633813 KMT2AQ03164 3969 aa3.53□□□□□ -1.84
LINC00254-202ENST00000633813 TRBV10-2A0A0K0K1G8 114 aa3.53□□□□□ -1.84
LINC00254-202ENST00000633813 C9orf129Q5T035 196 aaKnown RBP3.53□□□□□ -1.84
LINC00254-202ENST00000633813 KRTAP5-1Q6L8H4 278 aa3.53□□□□□ -1.84
LINC00254-202ENST00000633813 SDIM1Q6ZPB5 146 aa3.53□□□□□ -1.84
LINC00254-202ENST00000633813 LINC00337Q8N6G1 96 aa3.53□□□□□ -1.84
LINC00254-202ENST00000633813 VPS13DQ5THJ4 4388 aa3.52□□□□□ -1.85
LINC00254-202ENST00000633813 M0R378 163 aa3.52□□□□□ -1.85
LINC00254-202ENST00000633813 KRTAP12-2P59991 146 aa3.52□□□□□ -1.85
LINC00254-202ENST00000633813 PRR3P79522 188 aaKnown RBP3.52□□□□□ -1.85
LINC00254-202ENST00000633813 LINC00336Q6ZUF6 198 aa3.52□□□□□ -1.85
LINC00254-202ENST00000633813 Q8NDZ9 215 aa3.52□□□□□ -1.85
LINC00254-202ENST00000633813 TMEM126AQ9H061 195 aa3.52□□□□□ -1.85
LINC00254-202ENST00000633813 LINC00474Q9P2X8 69 aa3.52□□□□□ -1.85
LINC00254-202ENST00000633813 A0A096LNI7 61 aa3.51□□□□□ -1.85
LINC00254-202ENST00000633813 H3BUT2 72 aa3.51□□□□□ -1.85
LINC00254-202ENST00000633813 TSPAN13O95857 204 aa3.51□□□□□ -1.85
LINC00254-202ENST00000633813 RPL13AP40429 203 aaKnown RBP3.51□□□□□ -1.85
LINC00254-202ENST00000633813 S100A7L2Q5SY68 101 aa3.51□□□□□ -1.85
LINC00254-202ENST00000633813 OR13C6PQ8NH95 151 aa3.51□□□□□ -1.85
LINC00254-202ENST00000633813 IGKV2-24A0A0C4DH68 120 aa3.5□□□□□ -1.85
LINC00254-202ENST00000633813 A0A1W2PPM0 123 aa3.5□□□□□ -1.85
LINC00254-202ENST00000633813 H7C2G1 150 aa3.5□□□□□ -1.85
LINC00254-202ENST00000633813 NCR3O14931 201 aa3.5□□□□□ -1.85
LINC00254-202ENST00000633813 IGLV6-57P01721 117 aa3.5□□□□□ -1.85
LINC00254-202ENST00000633813 COX6CP09669 75 aa3.5□□□□□ -1.85
LINC00254-202ENST00000633813 FABP2P12104 132 aa3.5□□□□□ -1.85
LINC00254-202ENST00000633813 RPL28P46779 137 aaKnown RBP3.5□□□□□ -1.85
LINC00254-202ENST00000633813 PSMB2P49721 201 aa3.5□□□□□ -1.85
LINC00254-202ENST00000633813 LINC01620Q4KN68 170 aa3.5□□□□□ -1.85
LINC00254-202ENST00000633813 NKAPP1Q8N9T2 125 aa3.5□□□□□ -1.85
LINC00254-202ENST00000633813 CBY1Q9Y3M2 126 aa3.5□□□□□ -1.85
LINC00254-202ENST00000633813 TRBV20-1A0A075B6N2 111 aa3.49□□□□□ -1.85
LINC00254-202ENST00000633813 A0A1B0GV90 55 aa3.49□□□□□ -1.85
LINC00254-202ENST00000633813 SCGB1C2P0DMR2 95 aa3.49□□□□□ -1.85
LINC00254-202ENST00000633813 LYRM7Q5U5X0 104 aa3.49□□□□□ -1.85
LINC00254-202ENST00000633813 SMIM11BQ8TCY0 68 aa3.49□□□□□ -1.85
LINC00254-202ENST00000633813 DPH3Q96FX2 82 aa3.49□□□□□ -1.85
LINC00254-202ENST00000633813 NAA38Q9BRA0 125 aaKnown RBP3.49□□□□□ -1.85
LINC00254-202ENST00000633813 C22orf24Q9Y442 160 aa3.49□□□□□ -1.85
LINC00254-202ENST00000633813 ALMS1Q8TCU4 4167 aa3.48□□□□□ -1.85
LINC00254-202ENST00000633813 TRBV10-3A0A0K0K1G6 114 aa3.48□□□□□ -1.85
LINC00254-202ENST00000633813 A0A1W2PNN7 141 aa3.48□□□□□ -1.85
LINC00254-202ENST00000633813 H0YGX0 51 aa3.48□□□□□ -1.85
LINC00254-202ENST00000633813 CHTF8P0CG12 524 aa3.48□□□□□ -1.85
LINC00254-202ENST00000633813 VAMP3Q15836 100 aa3.48□□□□□ -1.85
LINC00254-202ENST00000633813 FAM19A5Q7Z5A7 132 aaPredicted RBP3.48□□□□□ -1.85
LINC00254-202ENST00000633813 MRPL55Q7Z7F7 128 aaKnown RBP3.48□□□□□ -1.85
LINC00254-202ENST00000633813 SPACA4Q8TDM5 124 aa3.48□□□□□ -1.85
LINC00254-202ENST00000633813 C7orf33Q8WU49 177 aa3.48□□□□□ -1.85
LINC00254-202ENST00000633813 LINC00167Q96N53 147 aa3.48□□□□□ -1.85
LINC00254-202ENST00000633813 KCNQ1DNQ9H478 68 aa3.48□□□□□ -1.85
LINC00254-202ENST00000633813 IGLV1-50A0A075B6I6 118 aa3.47□□□□□ -1.85
LINC00254-202ENST00000633813 TRAV23DV6A0A075B6W5 121 aa3.47□□□□□ -1.85
LINC00254-202ENST00000633813 TRBV7-6A0A0J9YX20 115 aa3.47□□□□□ -1.85
LINC00254-202ENST00000633813 PANO1I0J062 215 aa3.47□□□□□ -1.85
LINC00254-202ENST00000633813 M0QXV9 152 aa3.47□□□□□ -1.85
LINC00254-202ENST00000633813 FUSP35637 526 aaKnown RBP eCLIP3.47□□□□□ -1.85
LINC00254-202ENST00000633813 GTF2H5Q6ZYL4 71 aa3.47□□□□□ -1.85
LINC00254-202ENST00000633813 SPCS1Q9Y6A9 102 aa3.47□□□□□ -1.85
LINC00254-202ENST00000633813 DNAH6Q9C0G6 4158 aa3.47□□□□□ -1.85
LINC00254-202ENST00000633813 DNAH10Q8IVF4 4471 aa3.46□□□□□ -1.85
LINC00254-202ENST00000633813 K7EP34 96 aa3.46□□□□□ -1.86
LINC00254-202ENST00000633813 ZNF73O43830 326 aaPredicted RBP3.46□□□□□ -1.86
LINC00254-202ENST00000633813 TCL1BO95988 128 aa3.46□□□□□ -1.86
LINC00254-202ENST00000633813 C6orf99Q4VX62 202 aa3.46□□□□□ -1.86
LINC00254-202ENST00000633813 DIRC1Q969H9 104 aa3.46□□□□□ -1.86
LINC00254-202ENST00000633813 ANAPC11Q9NYG5 84 aa3.46□□□□□ -1.86
LINC00254-202ENST00000633813 PLAC8Q9NZF1 115 aa3.46□□□□□ -1.86
LINC00254-202ENST00000633813 A0A1B0GX51 115 aa3.45□□□□□ -1.86
LINC00254-202ENST00000633813 LST1O00453 97 aa3.45□□□□□ -1.86
LINC00254-202ENST00000633813 SNCGO76070 127 aa3.45□□□□□ -1.86
LINC00254-202ENST00000633813 SPRR1AP35321 89 aa3.45□□□□□ -1.86
LINC00254-202ENST00000633813 ATXN8Q156A1 80 aa3.45□□□□□ -1.86
LINC00254-202ENST00000633813 Q6ZSA8 131 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms