RNA–Protein interactions for RNA: ENST00000633627.1

CROCCP4-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

TSL 3 BASIC

Gene CROCCP4, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-202ENST00000633627 MT1HL1P0DM35 61 aa11.68□□□□□ -0.54
CROCCP4-202ENST00000633627 HERC1Q15751 4861 aa11.68□□□□□ -0.54
CROCCP4-202ENST00000633627 KRTAP1-4P0C5Y4 121 aa11.67□□□□□ -0.54
CROCCP4-202ENST00000633627 S100A12P80511 92 aa11.67□□□□□ -0.54
CROCCP4-202ENST00000633627 J3QL48 77 aa11.66□□□□□ -0.54
CROCCP4-202ENST00000633627 SLC25A34Q6PIV7 304 aa11.66□□□□□ -0.54
CROCCP4-202ENST00000633627 HIGD1BQ9P298 99 aa11.65□□□□□ -0.54
CROCCP4-202ENST00000633627 TRAV23DV6A0A075B6W5 121 aa11.64□□□□□ -0.55
CROCCP4-202ENST00000633627 OR13C6PQ8NH95 151 aa11.64□□□□□ -0.55
CROCCP4-202ENST00000633627 ETDCA0A1B0GVM5 59 aa11.63□□□□□ -0.55
CROCCP4-202ENST00000633627 C2orf91Q6ZV80 131 aa11.63□□□□□ -0.55
CROCCP4-202ENST00000633627 B5MCH6 92 aa11.62□□□□□ -0.55
CROCCP4-202ENST00000633627 KRTAP10-8P60410 259 aa11.62□□□□□ -0.55
CROCCP4-202ENST00000633627 CBY1Q9Y3M2 126 aa11.62□□□□□ -0.55
CROCCP4-202ENST00000633627 ZNF73O43830 326 aaPredicted RBP11.61□□□□□ -0.55
CROCCP4-202ENST00000633627 HIST1H4GQ99525 98 aa11.61□□□□□ -0.55
CROCCP4-202ENST00000633627 A4D1N5 150 aa11.6□□□□□ -0.55
CROCCP4-202ENST00000633627 HIGD2AQ9BW72 106 aa11.6□□□□□ -0.55
CROCCP4-202ENST00000633627 Q6ZRX8 168 aa11.58□□□□□ -0.56
CROCCP4-202ENST00000633627 TRAV13-2A0A0B4J235 113 aa11.57□□□□□ -0.56
CROCCP4-202ENST00000633627 A6NDN8 102 aa11.57□□□□□ -0.56
CROCCP4-202ENST00000633627 PRR26Q8N8Z3 221 aa11.57□□□□□ -0.56
CROCCP4-202ENST00000633627 SMCR5Q8TEV8 140 aa11.57□□□□□ -0.56
CROCCP4-202ENST00000633627 Q9BRP9 147 aa11.56□□□□□ -0.56
CROCCP4-202ENST00000633627 TAL2Q16559 108 aa11.53□□□□□ -0.56
CROCCP4-202ENST00000633627 C6orf99Q4VX62 202 aa11.53□□□□□ -0.56
CROCCP4-202ENST00000633627 LOC105371267A0A1B0GV96 52 aa11.52□□□□□ -0.57
CROCCP4-202ENST00000633627 ERC2-IT1O76042 136 aa11.52□□□□□ -0.57
CROCCP4-202ENST00000633627 HINT1P49773 126 aaPredicted RBP11.52□□□□□ -0.57
CROCCP4-202ENST00000633627 ANAPC11Q9NYG5 84 aa11.52□□□□□ -0.57
CROCCP4-202ENST00000633627 A0A087X002 238 aa11.51□□□□□ -0.57
CROCCP4-202ENST00000633627 SPRR4Q96PI1 79 aa11.51□□□□□ -0.57
CROCCP4-202ENST00000633627 UQCR10Q9UDW1 63 aa11.51□□□□□ -0.57
CROCCP4-202ENST00000633627 SMIM6P0DI80 62 aa11.5□□□□□ -0.57
CROCCP4-202ENST00000633627 ELOF1P60002 83 aaKnown RBP11.5□□□□□ -0.57
CROCCP4-202ENST00000633627 FAM229BQ4G0N7 80 aa11.5□□□□□ -0.57
CROCCP4-202ENST00000633627 CEND1Q8N111 149 aa11.5□□□□□ -0.57
CROCCP4-202ENST00000633627 SMIM11BQ8TCY0 68 aa11.5□□□□□ -0.57
CROCCP4-202ENST00000633627 C12orf57Q99622 126 aa11.5□□□□□ -0.57
CROCCP4-202ENST00000633627 TRBV7-6A0A0J9YX20 115 aa11.49□□□□□ -0.57
CROCCP4-202ENST00000633627 CFC1BP0CG36 223 aa11.48□□□□□ -0.57
CROCCP4-202ENST00000633627 CFC1P0CG37 223 aa11.48□□□□□ -0.57
CROCCP4-202ENST00000633627 CRYGAP11844 174 aa11.48□□□□□ -0.57
CROCCP4-202ENST00000633627 COX7BP24311 80 aa11.48□□□□□ -0.57
CROCCP4-202ENST00000633627 RPL13AP40429 203 aaKnown RBP11.48□□□□□ -0.57
CROCCP4-202ENST00000633627 ZNF706Q9Y5V0 76 aaPredicted RBP11.48□□□□□ -0.57
CROCCP4-202ENST00000633627 KRTAP13-2Q52LG2 175 aa11.46□□□□□ -0.57
CROCCP4-202ENST00000633627 A0A1B0GWB2 263 aa11.45□□□□□ -0.58
CROCCP4-202ENST00000633627 FXYD2P54710 66 aa11.45□□□□□ -0.58
CROCCP4-202ENST00000633627 HSD52Q0P140 79 aa11.45□□□□□ -0.58
CROCCP4-202ENST00000633627 DHRS4-AS1Q9P1J3 65 aa11.45□□□□□ -0.58
CROCCP4-202ENST00000633627 A0A0B4J2C4 111 aa11.44□□□□□ -0.58
CROCCP4-202ENST00000633627 LINC00483Q53H64 154 aa11.44□□□□□ -0.58
CROCCP4-202ENST00000633627 PRO1933Q9H354 126 aa11.42□□□□□ -0.58
CROCCP4-202ENST00000633627 TMEM238LA0A1B0GVL6 79 aa11.41□□□□□ -0.58
CROCCP4-202ENST00000633627 A6NJY4 79 aa11.41□□□□□ -0.58
CROCCP4-202ENST00000633627 GAGE2AQ6NT46 116 aa11.4□□□□□ -0.58
CROCCP4-202ENST00000633627 ST20-AS1Q8NBB2 130 aa11.4□□□□□ -0.58
CROCCP4-202ENST00000633627 TYMSOSQ8TAI1 123 aa11.4□□□□□ -0.58
CROCCP4-202ENST00000633627 RAB37Q96AX2 223 aa11.4□□□□□ -0.58
CROCCP4-202ENST00000633627 HMCN2Q8NDA2 5059 aa11.38□□□□□ -0.59
CROCCP4-202ENST00000633627 C3orf22Q8N5N4 141 aa11.38□□□□□ -0.59
CROCCP4-202ENST00000633627 VAMP3Q15836 100 aa11.37□□□□□ -0.59
CROCCP4-202ENST00000633627 PRO1854Q9UHT4 67 aa11.36□□□□□ -0.59
CROCCP4-202ENST00000633627 H7C2G1 150 aa11.35□□□□□ -0.59
CROCCP4-202ENST00000633627 SPRR1BP22528 89 aa11.35□□□□□ -0.59
CROCCP4-202ENST00000633627 LINC00575Q6W349 94 aa11.34□□□□□ -0.59
CROCCP4-202ENST00000633627 NHP2Q9NX24 153 aaKnown RBP11.33□□□□□ -0.6
CROCCP4-202ENST00000633627 BVES-AS1Q5T3Y7 98 aa11.32□□□□□ -0.6
CROCCP4-202ENST00000633627 LINC01547P58512 204 aaPredicted RBP11.3□□□□□ -0.6
CROCCP4-202ENST00000633627 IGLV5-48A0A075B6I7 105 aa11.29□□□□□ -0.6
CROCCP4-202ENST00000633627 K7ERJ3 54 aa11.29□□□□□ -0.6
CROCCP4-202ENST00000633627 SLC25A20O43772 301 aa11.29□□□□□ -0.6
CROCCP4-202ENST00000633627 CTAG1AP78358 180 aa11.28□□□□□ -0.6
CROCCP4-202ENST00000633627 LINC00304Q8N9R0 145 aa11.28□□□□□ -0.6
CROCCP4-202ENST00000633627 hADV29S1A0JD25 119 aa11.27□□□□□ -0.61
CROCCP4-202ENST00000633627 TSTD3H0UI37 97 aa11.27□□□□□ -0.61
CROCCP4-202ENST00000633627 Q1RN00 199 aa11.27□□□□□ -0.61
CROCCP4-202ENST00000633627 IGLV9-49A0A0B4J1Y8 123 aa11.26□□□□□ -0.61
CROCCP4-202ENST00000633627 TEX49A0A1B0GTD5 131 aa11.26□□□□□ -0.61
CROCCP4-202ENST00000633627 DEFB105AQ8NG35 78 aa11.26□□□□□ -0.61
CROCCP4-202ENST00000633627 H0YGX0 51 aa11.25□□□□□ -0.61
CROCCP4-202ENST00000633627 MOBPQ13875 183 aa11.25□□□□□ -0.61
CROCCP4-202ENST00000633627 SSBP3-AS1Q7Z2R9 100 aa11.25□□□□□ -0.61
CROCCP4-202ENST00000633627 Q8N377 158 aa11.24□□□□□ -0.61
CROCCP4-202ENST00000633627 Q8NBF4 154 aa11.24□□□□□ -0.61
CROCCP4-202ENST00000633627 Q6ZQY7 126 aa11.23□□□□□ -0.61
CROCCP4-202ENST00000633627 SMIM29Q86T20 159 aa11.23□□□□□ -0.61
CROCCP4-202ENST00000633627 TRIAP1O43715 76 aa11.22□□□□□ -0.61
CROCCP4-202ENST00000633627 TSPAN13O95857 204 aa11.22□□□□□ -0.61
CROCCP4-202ENST00000633627 FAM218AQ96MZ4 157 aa11.22□□□□□ -0.61
CROCCP4-202ENST00000633627 LAMTOR3Q9UHA4 124 aa11.22□□□□□ -0.61
CROCCP4-202ENST00000633627 M0R143 59 aa11.21□□□□□ -0.61
CROCCP4-202ENST00000633627 SPAG11AQ6PDA7 123 aa11.21□□□□□ -0.61
CROCCP4-202ENST00000633627 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.21□□□□□ -0.61
CROCCP4-202ENST00000633627 C9orf153Q5TBE3 101 aa11.19□□□□□ -0.62
CROCCP4-202ENST00000633627 A0A1B0GX51 115 aa11.16□□□□□ -0.62
CROCCP4-202ENST00000633627 PSMB2P49721 201 aa11.16□□□□□ -0.62
CROCCP4-202ENST00000633627 C4orf48Q5BLP8 95 aa11.15□□□□□ -0.62
CROCCP4-202ENST00000633627 SNCGO76070 127 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms