RNA–Protein interactions for RNA: ENST00000630016.1

CHD2-219, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-219ENST00000630016 UMAD1C9J7I0 102 aa1.6□□□□□ -2.15
CHD2-219ENST00000630016 M0R2T5 61 aa1.6□□□□□ -2.15
CHD2-219ENST00000630016 LINC00313P59037 77 aa1.6□□□□□ -2.15
CHD2-219ENST00000630016 HERVK_113P63121 156 aa1.6□□□□□ -2.15
CHD2-219ENST00000630016 SEC11AP67812 179 aa1.6□□□□□ -2.15
CHD2-219ENST00000630016 CCL20P78556 96 aa1.6□□□□□ -2.15
CHD2-219ENST00000630016 KRTAP19-2Q3LHN2 52 aa1.6□□□□□ -2.15
CHD2-219ENST00000630016 C10orf91Q5T1B1 145 aa1.6□□□□□ -2.15
CHD2-219ENST00000630016 AKR1C8PQ5T2L2 129 aa1.6□□□□□ -2.15
CHD2-219ENST00000630016 MBD3L1Q8WWY6 194 aa1.6□□□□□ -2.15
CHD2-219ENST00000630016 RETNLBQ9BQ08 111 aa1.6□□□□□ -2.15
CHD2-219ENST00000630016 SPANXA1Q9NS26 97 aa1.6□□□□□ -2.15
CHD2-219ENST00000630016 C6orf48Q9UBA6 75 aa1.6□□□□□ -2.15
CHD2-219ENST00000630016 UBE2D4Q9Y2X8 147 aa1.6□□□□□ -2.15
CHD2-219ENST00000630016 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.59□□□□□ -2.15
CHD2-219ENST00000630016 TGIF2-C20orf24A0A0A6YYL0 155 aa1.59□□□□□ -2.15
CHD2-219ENST00000630016 IGKV2-29A2NJV5 120 aaPredicted RBP1.59□□□□□ -2.15
CHD2-219ENST00000630016 FCER1GP30273 86 aa1.59□□□□□ -2.15
CHD2-219ENST00000630016 CKS1BP61024 79 aa1.59□□□□□ -2.15
CHD2-219ENST00000630016 JOSD1Q15040 202 aaPredicted RBP1.59□□□□□ -2.15
CHD2-219ENST00000630016 C1orf195Q5TG92 126 aa1.59□□□□□ -2.15
CHD2-219ENST00000630016 UNQ6190/PRO20217Q6UXQ8 127 aa1.59□□□□□ -2.15
CHD2-219ENST00000630016 C5orf38Q86SI9 138 aa1.59□□□□□ -2.15
CHD2-219ENST00000630016 BORCS7Q96B45 105 aa1.59□□□□□ -2.15
CHD2-219ENST00000630016 PLEKHB2Q96CS7 222 aa1.59□□□□□ -2.15
CHD2-219ENST00000630016 C20orf78Q9BR46 151 aa1.59□□□□□ -2.15
CHD2-219ENST00000630016 KRTAP4-1Q9BYQ7 146 aa1.59□□□□□ -2.15
CHD2-219ENST00000630016 SMIM3Q9BZL3 60 aa1.59□□□□□ -2.15
CHD2-219ENST00000630016 R4GN34 69 aa1.59□□□□□ -2.15
CHD2-219ENST00000630016 TRAV13-1A0A0B4J241 112 aa1.58□□□□□ -2.16
CHD2-219ENST00000630016 MAP1LC3B2A6NCE7 125 aa1.58□□□□□ -2.16
CHD2-219ENST00000630016 INMT-MINDY4F8WBC2 141 aa1.58□□□□□ -2.16
CHD2-219ENST00000630016 K7EMI3 77 aa1.58□□□□□ -2.16
CHD2-219ENST00000630016 PDE6DO43924 150 aa1.58□□□□□ -2.16
CHD2-219ENST00000630016 G0S2P27469 103 aa1.58□□□□□ -2.16
CHD2-219ENST00000630016 DDTP30046 118 aa1.58□□□□□ -2.16
CHD2-219ENST00000630016 RPL35P42766 123 aaKnown RBP1.58□□□□□ -2.16
CHD2-219ENST00000630016 HBBP68871 147 aa1.58□□□□□ -2.16
CHD2-219ENST00000630016 KRTAP25-1Q3LHN0 102 aa1.58□□□□□ -2.16
CHD2-219ENST00000630016 KRTAP6-3Q3LI67 103 aa1.58□□□□□ -2.16
CHD2-219ENST00000630016 Q8IZM0 81 aa1.58□□□□□ -2.16
CHD2-219ENST00000630016 S100ZQ8WXG8 99 aa1.58□□□□□ -2.16
CHD2-219ENST00000630016 MAP1LC3BQ9GZQ8 125 aa1.58□□□□□ -2.16
CHD2-219ENST00000630016 TMEM191AQ9H0A3 160 aa1.58□□□□□ -2.16
CHD2-219ENST00000630016 MANBALQ9NQG1 85 aa1.58□□□□□ -2.16
CHD2-219ENST00000630016 TMEM242Q9NWH2 141 aa1.58□□□□□ -2.16
CHD2-219ENST00000630016 SSPOA2VEC9 5147 aa1.57□□□□□ -2.16
CHD2-219ENST00000630016 MUC21A0A140T8X8 626 aa1.57□□□□□ -2.16
CHD2-219ENST00000630016 LINC01549A6NIU2 74 aa1.57□□□□□ -2.16
CHD2-219ENST00000630016 F8VRH5 84 aa1.57□□□□□ -2.16
CHD2-219ENST00000630016 IFI27P40305 119 aaPredicted RBP1.57□□□□□ -2.16
CHD2-219ENST00000630016 GNG4P50150 75 aa1.57□□□□□ -2.16
CHD2-219ENST00000630016 COX17Q14061 63 aa1.57□□□□□ -2.16
CHD2-219ENST00000630016 SFTA2Q6UW10 78 aa1.57□□□□□ -2.16
CHD2-219ENST00000630016 PPBPP02775 128 aa1.56□□□□□ -2.16
CHD2-219ENST00000630016 HRES1P13985 223 aa1.56□□□□□ -2.16
CHD2-219ENST00000630016 DEFA1P59665 94 aa1.56□□□□□ -2.16
CHD2-219ENST00000630016 DEFA3P59666 94 aa1.56□□□□□ -2.16
CHD2-219ENST00000630016 BATFQ16520 125 aa1.56□□□□□ -2.16
CHD2-219ENST00000630016 MRPL51Q4U2R6 128 aaKnown RBP1.56□□□□□ -2.16
CHD2-219ENST00000630016 COX6B2Q6YFQ2 88 aa1.56□□□□□ -2.16
CHD2-219ENST00000630016 KCNRGQ8N5I3 272 aa1.56□□□□□ -2.16
CHD2-219ENST00000630016 SFT2D1Q8WV19 159 aa1.56□□□□□ -2.16
CHD2-219ENST00000630016 RPL39LQ96EH5 51 aaKnown RBP1.56□□□□□ -2.16
CHD2-219ENST00000630016 C2orf88Q9BSF0 95 aa1.56□□□□□ -2.16
CHD2-219ENST00000630016 LIMD2Q9BT23 127 aa1.56□□□□□ -2.16
CHD2-219ENST00000630016 TRBV20OR9-2A0A075B6H5 130 aa1.55□□□□□ -2.16
CHD2-219ENST00000630016 A0A1B0GU33 70 aa1.55□□□□□ -2.16
CHD2-219ENST00000630016 A0A1B0GUT8 65 aa1.55□□□□□ -2.16
CHD2-219ENST00000630016 S100A8P05109 93 aa1.55□□□□□ -2.16
CHD2-219ENST00000630016 ZNF22P17026 224 aaPredicted RBP1.55□□□□□ -2.16
CHD2-219ENST00000630016 S100A12P80511 92 aa1.55□□□□□ -2.16
CHD2-219ENST00000630016 PCOTHQ58A44 107 aa1.55□□□□□ -2.16
CHD2-219ENST00000630016 Q5XG85 94 aa1.55□□□□□ -2.16
CHD2-219ENST00000630016 RPL7L1Q6DKI1 246 aaKnown RBP1.55□□□□□ -2.16
CHD2-219ENST00000630016 SPRR4Q96PI1 79 aa1.55□□□□□ -2.16
CHD2-219ENST00000630016 TMEM126AQ9H061 195 aa1.55□□□□□ -2.16
CHD2-219ENST00000630016 FCGBPQ9Y6R7 5405 aaPredicted RBP1.54□□□□□ -2.16
CHD2-219ENST00000630016 TSPEAR-AS2P59090 65 aa1.54□□□□□ -2.16
CHD2-219ENST00000630016 KRTAP12-3P60328 96 aa1.54□□□□□ -2.16
CHD2-219ENST00000630016 RAB5BP61020 215 aa1.54□□□□□ -2.16
CHD2-219ENST00000630016 ZNF345Q14585 488 aa1.54□□□□□ -2.16
CHD2-219ENST00000630016 KRTAP19-6Q3LI70 58 aa1.54□□□□□ -2.16
CHD2-219ENST00000630016 Q6ZUT4 128 aa1.54□□□□□ -2.16
CHD2-219ENST00000630016 TMEM141Q96I45 108 aa1.54□□□□□ -2.16
CHD2-219ENST00000630016 AMELXQ99217 191 aa1.54□□□□□ -2.16
CHD2-219ENST00000630016 HIGD2AQ9BW72 106 aa1.54□□□□□ -2.16
CHD2-219ENST00000630016 RNASE7Q9H1E1 156 aaKnown RBP1.54□□□□□ -2.16
CHD2-219ENST00000630016 XAGE1AQ9HD64 81 aa1.54□□□□□ -2.16
CHD2-219ENST00000630016 MED9Q9NWA0 146 aa1.54□□□□□ -2.16
CHD2-219ENST00000630016 LAMTOR2Q9Y2Q5 125 aa1.54□□□□□ -2.16
CHD2-219ENST00000630016 SYNE2Q8WXH0 6885 aaKnown RBP1.54□□□□□ -2.16
CHD2-219ENST00000630016 TRAV9-1A0A075B6T8 112 aa1.53□□□□□ -2.16
CHD2-219ENST00000630016 C20orf202A1L168 122 aa1.53□□□□□ -2.16
CHD2-219ENST00000630016 HMSDA8MTL9 139 aa1.53□□□□□ -2.16
CHD2-219ENST00000630016 LINC00587B1AMM8 73 aa1.53□□□□□ -2.16
CHD2-219ENST00000630016 F8W036 122 aa1.53□□□□□ -2.16
CHD2-219ENST00000630016 M0R378 163 aa1.53□□□□□ -2.16
CHD2-219ENST00000630016 IGLV6-57P01721 117 aa1.53□□□□□ -2.16
CHD2-219ENST00000630016 Q5BKY6 102 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms