RNA–Protein interactions for RNA: ENST00000629346.2

CHD2-218, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene CHD2, Length 1,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-218ENST00000629346 ARL17AQ8IVW1 177 aa6.65□□□□□ -1.34
CHD2-218ENST00000629346 DAND5Q8N907 189 aa6.65□□□□□ -1.34
CHD2-218ENST00000629346 HIST1H2BHQ93079 126 aa6.65□□□□□ -1.34
CHD2-218ENST00000629346 HIST1H2BNQ99877 126 aa6.65□□□□□ -1.34
CHD2-218ENST00000629346 HIST1H2BMQ99879 126 aa6.65□□□□□ -1.34
CHD2-218ENST00000629346 HIGD2AQ9BW72 106 aa6.65□□□□□ -1.34
CHD2-218ENST00000629346 SPRR1AP35321 89 aa6.64□□□□□ -1.35
CHD2-218ENST00000629346 KCNQ1DNQ9H478 68 aa6.64□□□□□ -1.35
CHD2-218ENST00000629346 TRBV10-3A0A0K0K1G6 114 aa6.63□□□□□ -1.35
CHD2-218ENST00000629346 S100A12P80511 92 aa6.63□□□□□ -1.35
CHD2-218ENST00000629346 MIEN1Q9BRT3 115 aa6.63□□□□□ -1.35
CHD2-218ENST00000629346 TRBV10-2A0A0K0K1G8 114 aa6.62□□□□□ -1.35
CHD2-218ENST00000629346 E9PLD3 99 aa6.62□□□□□ -1.35
CHD2-218ENST00000629346 SYS1-DBNDD2H3BUS1 97 aa6.62□□□□□ -1.35
CHD2-218ENST00000629346 ETDCA0A1B0GVM5 59 aa6.61□□□□□ -1.35
CHD2-218ENST00000629346 KRTAP4-16G5E9R7 235 aaPredicted RBP6.61□□□□□ -1.35
CHD2-218ENST00000629346 SPRR4Q96PI1 79 aa6.61□□□□□ -1.35
CHD2-218ENST00000629346 SPANXB1Q9NS25 103 aaPredicted RBP6.61□□□□□ -1.35
CHD2-218ENST00000629346 ZNF706Q9Y5V0 76 aaPredicted RBP6.61□□□□□ -1.35
CHD2-218ENST00000629346 A0A0J9YXY3 114 aa6.6□□□□□ -1.35
CHD2-218ENST00000629346 NDUFC2O95298 119 aa6.6□□□□□ -1.35
CHD2-218ENST00000629346 DDTP30046 118 aa6.6□□□□□ -1.35
CHD2-218ENST00000629346 LINC01545Q5VT33 79 aa6.6□□□□□ -1.35
CHD2-218ENST00000629346 PET117Q6UWS5 81 aa6.59□□□□□ -1.35
CHD2-218ENST00000629346 IGLV8-61A0A075B6I0 122 aa6.58□□□□□ -1.36
CHD2-218ENST00000629346 S100A7L2Q5SY68 101 aa6.58□□□□□ -1.36
CHD2-218ENST00000629346 ADAMTSL4-AS1Q5T5F5 129 aa6.58□□□□□ -1.36
CHD2-218ENST00000629346 SMCR5Q8TEV8 140 aa6.58□□□□□ -1.36
CHD2-218ENST00000629346 B5MCH6 92 aa6.57□□□□□ -1.36
CHD2-218ENST00000629346 IGLV6-57P01721 117 aa6.57□□□□□ -1.36
CHD2-218ENST00000629346 NPC2P61916 151 aa6.57□□□□□ -1.36
CHD2-218ENST00000629346 COA6Q5JTJ3 125 aaKnown RBP6.57□□□□□ -1.36
CHD2-218ENST00000629346 LCE3BQ5TA77 95 aa6.57□□□□□ -1.36
CHD2-218ENST00000629346 SOSTDC1Q6X4U4 206 aa6.57□□□□□ -1.36
CHD2-218ENST00000629346 C3orf79P0CE67 100 aa6.56□□□□□ -1.36
CHD2-218ENST00000629346 PCOTHQ58A44 107 aa6.56□□□□□ -1.36
CHD2-218ENST00000629346 Q8NBF4 154 aa6.56□□□□□ -1.36
CHD2-218ENST00000629346 TRAV23DV6A0A075B6W5 121 aa6.55□□□□□ -1.36
CHD2-218ENST00000629346 EIF4EBP3O60516 100 aaPredicted RBP6.55□□□□□ -1.36
CHD2-218ENST00000629346 TIMM17BO60830 172 aa6.55□□□□□ -1.36
CHD2-218ENST00000629346 Q6ZRX8 168 aa6.55□□□□□ -1.36
CHD2-218ENST00000629346 ZNF815PA8K554 130 aa6.54□□□□□ -1.36
CHD2-218ENST00000629346 KRTDAPP60985 99 aa6.54□□□□□ -1.36
CHD2-218ENST00000629346 LINC00483Q53H64 154 aa6.54□□□□□ -1.36
CHD2-218ENST00000629346 LITAFQ99732 161 aa6.54□□□□□ -1.36
CHD2-218ENST00000629346 Q9BRP9 147 aa6.54□□□□□ -1.36
CHD2-218ENST00000629346 SSPOA2VEC9 5147 aa6.54□□□□□ -1.36
CHD2-218ENST00000629346 ERC2-IT1O76042 136 aa6.53□□□□□ -1.36
CHD2-218ENST00000629346 LINC00308Q8TCZ7 52 aa6.53□□□□□ -1.36
CHD2-218ENST00000629346 SPANXCQ9NY87 97 aa6.53□□□□□ -1.36
CHD2-218ENST00000629346 CBY1Q9Y3M2 126 aa6.53□□□□□ -1.36
CHD2-218ENST00000629346 C20orf202A1L168 122 aa6.52□□□□□ -1.37
CHD2-218ENST00000629346 ZNF73O43830 326 aaPredicted RBP6.52□□□□□ -1.37
CHD2-218ENST00000629346 SPINK1P00995 79 aa6.52□□□□□ -1.37
CHD2-218ENST00000629346 JOSD1Q15040 202 aaPredicted RBP6.52□□□□□ -1.37
CHD2-218ENST00000629346 GAGE2AQ6NT46 116 aa6.52□□□□□ -1.37
CHD2-218ENST00000629346 TTTY13Q9BZ97 58 aa6.52□□□□□ -1.37
CHD2-218ENST00000629346 COX6B2Q6YFQ2 88 aa6.51□□□□□ -1.37
CHD2-218ENST00000629346 USH2AO75445 5202 aa6.51□□□□□ -1.37
CHD2-218ENST00000629346 FCGBPQ9Y6R7 5405 aaPredicted RBP6.5□□□□□ -1.37
CHD2-218ENST00000629346 HINT1P49773 126 aaPredicted RBP6.5□□□□□ -1.37
CHD2-218ENST00000629346 FLGP20930 4061 aaPredicted RBP6.5□□□□□ -1.37
CHD2-218ENST00000629346 IGLV9-49A0A0B4J1Y8 123 aa6.49□□□□□ -1.37
CHD2-218ENST00000629346 AKR1D1P51857 326 aa6.49□□□□□ -1.37
CHD2-218ENST00000629346 Q8N377 158 aa6.49□□□□□ -1.37
CHD2-218ENST00000629346 OR13C6PQ8NH95 151 aa6.49□□□□□ -1.37
CHD2-218ENST00000629346 MOBPQ13875 183 aa6.48□□□□□ -1.37
CHD2-218ENST00000629346 SCGB1D4Q6XE38 83 aa6.48□□□□□ -1.37
CHD2-218ENST00000629346 LINC00518Q8N0U6 118 aa6.48□□□□□ -1.37
CHD2-218ENST00000629346 SPANXDQ9BXN6 97 aa6.48□□□□□ -1.37
CHD2-218ENST00000629346 SYNE2Q8WXH0 6885 aaKnown RBP6.48□□□□□ -1.37
CHD2-218ENST00000629346 ANKRD39Q53RE8 183 aa6.47□□□□□ -1.37
CHD2-218ENST00000629346 SSBP3-AS1Q7Z2R9 100 aa6.47□□□□□ -1.37
CHD2-218ENST00000629346 ATOH7Q8N100 152 aa6.47□□□□□ -1.37
CHD2-218ENST00000629346 C5orf52A6NGY3 159 aa6.46□□□□□ -1.38
CHD2-218ENST00000629346 COPS9Q8WXC6 57 aa6.46□□□□□ -1.38
CHD2-218ENST00000629346 KRTAP4-8A0A0G2JLE6 195 aa6.45□□□□□ -1.38
CHD2-218ENST00000629346 SLC25A20O43772 301 aa6.45□□□□□ -1.38
CHD2-218ENST00000629346 ST20-AS1Q8NBB2 130 aa6.45□□□□□ -1.38
CHD2-218ENST00000629346 KRTAP4-12Q9BQ66 201 aa6.45□□□□□ -1.38
CHD2-218ENST00000629346 DHRS4-AS1Q9P1J3 65 aa6.45□□□□□ -1.38
CHD2-218ENST00000629346 IFITM1P13164 125 aa6.44□□□□□ -1.38
CHD2-218ENST00000629346 RPS29P62273 56 aaKnown RBP6.44□□□□□ -1.38
CHD2-218ENST00000629346 C9orf153Q5TBE3 101 aa6.44□□□□□ -1.38
CHD2-218ENST00000629346 Q6ZVH6 145 aa6.44□□□□□ -1.38
CHD2-218ENST00000629346 MACF1Q9UPN3 7388 aaKnown RBP6.44□□□□□ -1.38
CHD2-218ENST00000629346 TMEM238LA0A1B0GVL6 79 aa6.43□□□□□ -1.38
CHD2-218ENST00000629346 S100A1P23297 94 aa6.43□□□□□ -1.38
CHD2-218ENST00000629346 S100A2P29034 98 aa6.43□□□□□ -1.38
CHD2-218ENST00000629346 ELOF1P60002 83 aaKnown RBP6.43□□□□□ -1.38
CHD2-218ENST00000629346 SNRPEP62304 92 aaKnown RBP6.43□□□□□ -1.38
CHD2-218ENST00000629346 KRTAP19-1Q8IUB9 90 aa6.43□□□□□ -1.38
CHD2-218ENST00000629346 PCP2Q8IVA1 136 aa6.43□□□□□ -1.38
CHD2-218ENST00000629346 HIST3H2BBQ8N257 126 aa6.43□□□□□ -1.38
CHD2-218ENST00000629346 KRTAP9-9Q9BYP9 154 aa6.43□□□□□ -1.38
CHD2-218ENST00000629346 KRTAP9-4Q9BYQ2 154 aa6.43□□□□□ -1.38
CHD2-218ENST00000629346 C9orf92A6NGG3 77 aa6.42□□□□□ -1.38
CHD2-218ENST00000629346 COX7BP24311 80 aa6.42□□□□□ -1.38
CHD2-218ENST00000629346 C6orf99Q4VX62 202 aa6.42□□□□□ -1.38
CHD2-218ENST00000629346 HIST1H2BLQ99880 126 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms