RNA–Protein interactions for RNA: ENST00000628614.1

SPTAN1-214, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTAN1, Length 993 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-214ENST00000628614 TPRXLQ17RH7 258 aa9.87□□□□□ -0.83
SPTAN1-214ENST00000628614 Q8NBF4 154 aa9.87□□□□□ -0.83
SPTAN1-214ENST00000628614 CBY1Q9Y3M2 126 aa9.87□□□□□ -0.83
SPTAN1-214ENST00000628614 IGLV7-46A0A075B6I9 117 aa9.86□□□□□ -0.83
SPTAN1-214ENST00000628614 EIF4EBP3O60516 100 aaPredicted RBP9.86□□□□□ -0.83
SPTAN1-214ENST00000628614 TIMM17BO60830 172 aa9.86□□□□□ -0.83
SPTAN1-214ENST00000628614 ERC2-IT1O76042 136 aa9.86□□□□□ -0.83
SPTAN1-214ENST00000628614 MUC2Q02817 5179 aa9.85□□□□□ -0.83
SPTAN1-214ENST00000628614 C3orf79P0CE67 100 aa9.85□□□□□ -0.83
SPTAN1-214ENST00000628614 COA6Q5JTJ3 125 aaKnown RBP9.85□□□□□ -0.83
SPTAN1-214ENST00000628614 LITAFQ99732 161 aa9.85□□□□□ -0.83
SPTAN1-214ENST00000628614 SPANXCQ9NY87 97 aa9.85□□□□□ -0.83
SPTAN1-214ENST00000628614 ZNF815PA8K554 130 aa9.84□□□□□ -0.83
SPTAN1-214ENST00000628614 ZNF73O43830 326 aaPredicted RBP9.84□□□□□ -0.83
SPTAN1-214ENST00000628614 LINC00308Q8TCZ7 52 aa9.84□□□□□ -0.83
SPTAN1-214ENST00000628614 CDIP1Q9H305 208 aa9.83□□□□□ -0.84
SPTAN1-214ENST00000628614 SPINK1P00995 79 aa9.82□□□□□ -0.84
SPTAN1-214ENST00000628614 HINT1P49773 126 aaPredicted RBP9.82□□□□□ -0.84
SPTAN1-214ENST00000628614 KRTDAPP60985 99 aa9.82□□□□□ -0.84
SPTAN1-214ENST00000628614 IGLV9-49A0A0B4J1Y8 123 aa9.81□□□□□ -0.84
SPTAN1-214ENST00000628614 MOBPQ13875 183 aa9.81□□□□□ -0.84
SPTAN1-214ENST00000628614 FP248Q71RG6 208 aaPredicted RBP9.81□□□□□ -0.84
SPTAN1-214ENST00000628614 MUC17Q685J3 4493 aa9.81□□□□□ -0.84
SPTAN1-214ENST00000628614 C20orf202A1L168 122 aa9.8□□□□□ -0.84
SPTAN1-214ENST00000628614 SSBP3-AS1Q7Z2R9 100 aa9.8□□□□□ -0.84
SPTAN1-214ENST00000628614 OR13C6PQ8NH95 151 aa9.8□□□□□ -0.84
SPTAN1-214ENST00000628614 A0A0U1RQV1 116 aa9.79□□□□□ -0.84
SPTAN1-214ENST00000628614 TTTY13Q9BZ97 58 aa9.79□□□□□ -0.84
SPTAN1-214ENST00000628614 C5orf52A6NGY3 159 aa9.78□□□□□ -0.84
SPTAN1-214ENST00000628614 SPANXDQ9BXN6 97 aa9.78□□□□□ -0.84
SPTAN1-214ENST00000628614 RPS29P62273 56 aaKnown RBP9.77□□□□□ -0.85
SPTAN1-214ENST00000628614 LINC00518Q8N0U6 118 aa9.77□□□□□ -0.85
SPTAN1-214ENST00000628614 SCGB1D4Q6XE38 83 aa9.76□□□□□ -0.85
SPTAN1-214ENST00000628614 AKR1D1P51857 326 aa9.75□□□□□ -0.85
SPTAN1-214ENST00000628614 C9orf153Q5TBE3 101 aa9.74□□□□□ -0.85
SPTAN1-214ENST00000628614 ST20-AS1Q8NBB2 130 aa9.74□□□□□ -0.85
SPTAN1-214ENST00000628614 COPS9Q8WXC6 57 aa9.74□□□□□ -0.85
SPTAN1-214ENST00000628614 DHRS4-AS1Q9P1J3 65 aa9.74□□□□□ -0.85
SPTAN1-214ENST00000628614 ANKRD39Q53RE8 183 aa9.73□□□□□ -0.85
SPTAN1-214ENST00000628614 ELOF1P60002 83 aaKnown RBP9.71□□□□□ -0.86
SPTAN1-214ENST00000628614 ATOH7Q8N100 152 aa9.71□□□□□ -0.86
SPTAN1-214ENST00000628614 IFITM1P13164 125 aa9.7□□□□□ -0.86
SPTAN1-214ENST00000628614 SLC25A34Q6PIV7 304 aa9.7□□□□□ -0.86
SPTAN1-214ENST00000628614 Q6ZVH6 145 aa9.7□□□□□ -0.86
SPTAN1-214ENST00000628614 Q8N377 158 aa9.7□□□□□ -0.86
SPTAN1-214ENST00000628614 SLC25A20O43772 301 aa9.69□□□□□ -0.86
SPTAN1-214ENST00000628614 SPRR1BP22528 89 aa9.69□□□□□ -0.86
SPTAN1-214ENST00000628614 COX7BP24311 80 aa9.69□□□□□ -0.86
SPTAN1-214ENST00000628614 KRTAP13-3Q3SY46 172 aa9.69□□□□□ -0.86
SPTAN1-214ENST00000628614 C6orf99Q4VX62 202 aa9.69□□□□□ -0.86
SPTAN1-214ENST00000628614 TRBV7-6A0A0J9YX20 115 aa9.66□□□□□ -0.86
SPTAN1-214ENST00000628614 SNRPEP62304 92 aaKnown RBP9.66□□□□□ -0.86
SPTAN1-214ENST00000628614 PCP2Q8IVA1 136 aa9.66□□□□□ -0.86
SPTAN1-214ENST00000628614 LAMTOR3Q9UHA4 124 aa9.65□□□□□ -0.86
SPTAN1-214ENST00000628614 A6NDN8 102 aa9.64□□□□□ -0.87
SPTAN1-214ENST00000628614 MUSTN1Q8IVN3 82 aa9.64□□□□□ -0.87
SPTAN1-214ENST00000628614 A0A1B0GWB2 263 aa9.63□□□□□ -0.87
SPTAN1-214ENST00000628614 S100A2P29034 98 aa9.63□□□□□ -0.87
SPTAN1-214ENST00000628614 TAL2Q16559 108 aa9.62□□□□□ -0.87
SPTAN1-214ENST00000628614 HIST3H2BBQ8N257 126 aa9.62□□□□□ -0.87
SPTAN1-214ENST00000628614 HIST1H2BLQ99880 126 aa9.61□□□□□ -0.87
SPTAN1-214ENST00000628614 LIMD2Q9BT23 127 aa9.61□□□□□ -0.87
SPTAN1-214ENST00000628614 TRAV13-2A0A0B4J235 113 aa9.6□□□□□ -0.87
SPTAN1-214ENST00000628614 FAT4Q6V0I7 4981 aa9.59□□□□□ -0.87
SPTAN1-214ENST00000628614 TEX49A0A1B0GTD5 131 aa9.59□□□□□ -0.87
SPTAN1-214ENST00000628614 HSBP1L1C9JCN9 74 aa9.59□□□□□ -0.87
SPTAN1-214ENST00000628614 S100A1P23297 94 aa9.59□□□□□ -0.87
SPTAN1-214ENST00000628614 DEFB105AQ8NG35 78 aa9.59□□□□□ -0.87
SPTAN1-214ENST00000628614 A4D1N5 150 aa9.58□□□□□ -0.88
SPTAN1-214ENST00000628614 ASB16-AS1Q495Z4 193 aa9.58□□□□□ -0.88
SPTAN1-214ENST00000628614 Q1RN00 199 aa9.57□□□□□ -0.88
SPTAN1-214ENST00000628614 S100A6P06703 90 aa9.56□□□□□ -0.88
SPTAN1-214ENST00000628614 HRCT1Q6UXD1 115 aa9.56□□□□□ -0.88
SPTAN1-214ENST00000628614 NHP2Q9NX24 153 aaKnown RBP9.56□□□□□ -0.88
SPTAN1-214ENST00000628614 SEC61BP60468 96 aaKnown RBP9.55□□□□□ -0.88
SPTAN1-214ENST00000628614 CD164Q04900 197 aa9.55□□□□□ -0.88
SPTAN1-214ENST00000628614 SMIM11BQ8TCY0 68 aa9.55□□□□□ -0.88
SPTAN1-214ENST00000628614 PRO1933Q9H354 126 aa9.55□□□□□ -0.88
SPTAN1-214ENST00000628614 IGLV5-48A0A075B6I7 105 aa9.54□□□□□ -0.88
SPTAN1-214ENST00000628614 LINC01547P58512 204 aaPredicted RBP9.53□□□□□ -0.88
SPTAN1-214ENST00000628614 LCE2AQ5TA79 106 aaPredicted RBP9.52□□□□□ -0.89
SPTAN1-214ENST00000628614 XP32Q5T750 250 aa9.51□□□□□ -0.89
SPTAN1-214ENST00000628614 SMIM29Q86T20 159 aa9.51□□□□□ -0.89
SPTAN1-214ENST00000628614 H7C2G1 150 aa9.5□□□□□ -0.89
SPTAN1-214ENST00000628614 VAMP3Q15836 100 aa9.5□□□□□ -0.89
SPTAN1-214ENST00000628614 SCGB1D1O95968 90 aa9.47□□□□□ -0.89
SPTAN1-214ENST00000628614 Q5XG85 94 aa9.46□□□□□ -0.9
SPTAN1-214ENST00000628614 LINC00575Q6W349 94 aa9.45□□□□□ -0.9
SPTAN1-214ENST00000628614 HIST1H4GQ99525 98 aa9.44□□□□□ -0.9
SPTAN1-214ENST00000628614 F8WEM9 126 aa9.43□□□□□ -0.9
SPTAN1-214ENST00000628614 hADV29S1A0JD25 119 aa9.42□□□□□ -0.9
SPTAN1-214ENST00000628614 COX8AP10176 69 aa9.42□□□□□ -0.9
SPTAN1-214ENST00000628614 KRTAP4-1Q9BYQ7 146 aa9.42□□□□□ -0.9
SPTAN1-214ENST00000628614 A0A0G2JQZ4 141 aa9.41□□□□□ -0.9
SPTAN1-214ENST00000628614 C9orf92A6NGG3 77 aa9.41□□□□□ -0.9
SPTAN1-214ENST00000628614 Q6ZQY7 126 aa9.41□□□□□ -0.9
SPTAN1-214ENST00000628614 C12orf57Q99622 126 aa9.4□□□□□ -0.9
SPTAN1-214ENST00000628614 DLEU1O43261 78 aa9.39□□□□□ -0.91
SPTAN1-214ENST00000628614 BVES-AS1Q5T3Y7 98 aa9.39□□□□□ -0.91
SPTAN1-214ENST00000628614 C1orf195Q5TG92 126 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms