RNA–Protein interactions for RNA: ENST00000628343.2

SOX2-OT-246, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 746 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-246ENST00000628343 RPL13AP40429 203 aaKnown RBP8.05□□□□□ -1.12
SOX2-OT-246ENST00000628343 Q6ZVH6 145 aa8.04□□□□□ -1.12
SOX2-OT-246ENST00000628343 MUSTN1Q8IVN3 82 aa8.04□□□□□ -1.12
SOX2-OT-246ENST00000628343 PPDPFQ9H3Y8 114 aa8.04□□□□□ -1.12
SOX2-OT-246ENST00000628343 OR13C6PQ8NH95 151 aa8.03□□□□□ -1.12
SOX2-OT-246ENST00000628343 SMCR5Q8TEV8 140 aa8.03□□□□□ -1.12
SOX2-OT-246ENST00000628343 TMA7Q9Y2S6 64 aaKnown RBP8.03□□□□□ -1.12
SOX2-OT-246ENST00000628343 ZNF73O43830 326 aaPredicted RBP8.02□□□□□ -1.13
SOX2-OT-246ENST00000628343 CRYGAP11844 174 aa8.02□□□□□ -1.13
SOX2-OT-246ENST00000628343 JOSD1Q15040 202 aaPredicted RBP8.02□□□□□ -1.13
SOX2-OT-246ENST00000628343 KRTAP13-2Q52LG2 175 aa8.02□□□□□ -1.13
SOX2-OT-246ENST00000628343 Q6ZRX8 168 aa8.02□□□□□ -1.13
SOX2-OT-246ENST00000628343 LINC00518Q8N0U6 118 aa8.02□□□□□ -1.13
SOX2-OT-246ENST00000628343 COPS9Q8WXC6 57 aa8.02□□□□□ -1.13
SOX2-OT-246ENST00000628343 Q9BRP9 147 aa8.02□□□□□ -1.13
SOX2-OT-246ENST00000628343 HMCN2Q8NDA2 5059 aa8.01□□□□□ -1.13
SOX2-OT-246ENST00000628343 FAM229BQ4G0N7 80 aa8.01□□□□□ -1.13
SOX2-OT-246ENST00000628343 SPRR4Q96PI1 79 aa8.01□□□□□ -1.13
SOX2-OT-246ENST00000628343 ERC2-IT1O76042 136 aa8□□□□□ -1.13
SOX2-OT-246ENST00000628343 COX8AP10176 69 aa8□□□□□ -1.13
SOX2-OT-246ENST00000628343 PAM16Q9Y3D7 125 aa7.99□□□□□ -1.13
SOX2-OT-246ENST00000628343 SPATA45Q537H7 98 aa7.98□□□□□ -1.13
SOX2-OT-246ENST00000628343 TYMSOSQ8TAI1 123 aa7.98□□□□□ -1.13
SOX2-OT-246ENST00000628343 CBY1Q9Y3M2 126 aa7.98□□□□□ -1.13
SOX2-OT-246ENST00000628343 ZNF706Q9Y5V0 76 aaPredicted RBP7.98□□□□□ -1.13
SOX2-OT-246ENST00000628343 DLEU1O43261 78 aa7.97□□□□□ -1.13
SOX2-OT-246ENST00000628343 C14orf144Q96I85 54 aa7.97□□□□□ -1.13
SOX2-OT-246ENST00000628343 VAMP8Q9BV40 100 aa7.97□□□□□ -1.13
SOX2-OT-246ENST00000628343 PYY3Q5JQD4 70 aa7.96□□□□□ -1.14
SOX2-OT-246ENST00000628343 A6NDN8 102 aa7.95□□□□□ -1.14
SOX2-OT-246ENST00000628343 C6orf99Q4VX62 202 aa7.95□□□□□ -1.14
SOX2-OT-246ENST00000628343 C3orf22Q8N5N4 141 aa7.95□□□□□ -1.14
SOX2-OT-246ENST00000628343 A4D1N5 150 aa7.94□□□□□ -1.14
SOX2-OT-246ENST00000628343 HINT1P49773 126 aaPredicted RBP7.94□□□□□ -1.14
SOX2-OT-246ENST00000628343 LINC00483Q53H64 154 aa7.94□□□□□ -1.14
SOX2-OT-246ENST00000628343 TRAV13-2A0A0B4J235 113 aa7.93□□□□□ -1.14
SOX2-OT-246ENST00000628343 ELOF1P60002 83 aaKnown RBP7.93□□□□□ -1.14
SOX2-OT-246ENST00000628343 GAGE2AQ6NT46 116 aa7.93□□□□□ -1.14
SOX2-OT-246ENST00000628343 HIST1H4GQ99525 98 aa7.93□□□□□ -1.14
SOX2-OT-246ENST00000628343 COX7BP24311 80 aa7.92□□□□□ -1.14
SOX2-OT-246ENST00000628343 SLC25A34Q6PIV7 304 aa7.92□□□□□ -1.14
SOX2-OT-246ENST00000628343 C2orf91Q6ZV80 131 aa7.92□□□□□ -1.14
SOX2-OT-246ENST00000628343 ST20-AS1Q8NBB2 130 aa7.91□□□□□ -1.14
SOX2-OT-246ENST00000628343 HIGD1BQ9P298 99 aa7.91□□□□□ -1.14
SOX2-OT-246ENST00000628343 TRBV7-6A0A0J9YX20 115 aa7.9□□□□□ -1.14
SOX2-OT-246ENST00000628343 TSPAN13O95857 204 aa7.9□□□□□ -1.14
SOX2-OT-246ENST00000628343 LINC00304Q8N9R0 145 aa7.9□□□□□ -1.14
SOX2-OT-246ENST00000628343 SMIM11BQ8TCY0 68 aa7.9□□□□□ -1.14
SOX2-OT-246ENST00000628343 DHRS4-AS1Q9P1J3 65 aa7.9□□□□□ -1.14
SOX2-OT-246ENST00000628343 LCE2DQ5TA82 110 aaPredicted RBP7.89□□□□□ -1.15
SOX2-OT-246ENST00000628343 C12orf57Q99622 126 aa7.89□□□□□ -1.15
SOX2-OT-246ENST00000628343 A0A1B0GWB2 263 aa7.87□□□□□ -1.15
SOX2-OT-246ENST00000628343 IGLV9-49A0A0B4J1Y8 123 aa7.86□□□□□ -1.15
SOX2-OT-246ENST00000628343 MOBPQ13875 183 aa7.85□□□□□ -1.15
SOX2-OT-246ENST00000628343 Q8NBF4 154 aa7.85□□□□□ -1.15
SOX2-OT-246ENST00000628343 CFC1BP0CG36 223 aa7.84□□□□□ -1.15
SOX2-OT-246ENST00000628343 CFC1P0CG37 223 aa7.84□□□□□ -1.15
SOX2-OT-246ENST00000628343 SPRR1BP22528 89 aa7.84□□□□□ -1.15
SOX2-OT-246ENST00000628343 TAL2Q16559 108 aa7.82□□□□□ -1.16
SOX2-OT-246ENST00000628343 CEND1Q8N111 149 aa7.82□□□□□ -1.16
SOX2-OT-246ENST00000628343 PRR4Q16378 134 aa7.81□□□□□ -1.16
SOX2-OT-246ENST00000628343 A0A0B4J2C4 111 aa7.8□□□□□ -1.16
SOX2-OT-246ENST00000628343 FXYD2P54710 66 aa7.8□□□□□ -1.16
SOX2-OT-246ENST00000628343 LINC01547P58512 204 aaPredicted RBP7.8□□□□□ -1.16
SOX2-OT-246ENST00000628343 CTAG1AP78358 180 aa7.8□□□□□ -1.16
SOX2-OT-246ENST00000628343 C9orf153Q5TBE3 101 aa7.8□□□□□ -1.16
SOX2-OT-246ENST00000628343 SPAG11AQ6PDA7 123 aa7.8□□□□□ -1.16
SOX2-OT-246ENST00000628343 SSBP3-AS1Q7Z2R9 100 aa7.8□□□□□ -1.16
SOX2-OT-246ENST00000628343 DEFB105AQ8NG35 78 aa7.8□□□□□ -1.16
SOX2-OT-246ENST00000628343 UBR4Q5T4S7 5183 aa7.8□□□□□ -1.16
SOX2-OT-246ENST00000628343 H7C2G1 150 aa7.79□□□□□ -1.16
SOX2-OT-246ENST00000628343 VAMP3Q15836 100 aa7.79□□□□□ -1.16
SOX2-OT-246ENST00000628343 LINC00575Q6W349 94 aa7.79□□□□□ -1.16
SOX2-OT-246ENST00000628343 RAB37Q96AX2 223 aa7.79□□□□□ -1.16
SOX2-OT-246ENST00000628343 RETNLBQ9BQ08 111 aa7.79□□□□□ -1.16
SOX2-OT-246ENST00000628343 NHP2Q9NX24 153 aaKnown RBP7.79□□□□□ -1.16
SOX2-OT-246ENST00000628343 IGLV5-48A0A075B6I7 105 aa7.78□□□□□ -1.16
SOX2-OT-246ENST00000628343 TEX49A0A1B0GTD5 131 aa7.78□□□□□ -1.16
SOX2-OT-246ENST00000628343 C4orf48Q5BLP8 95 aa7.78□□□□□ -1.16
SOX2-OT-246ENST00000628343 UQCR10Q9UDW1 63 aa7.78□□□□□ -1.16
SOX2-OT-246ENST00000628343 LRP2P98164 4655 aa7.78□□□□□ -1.16
SOX2-OT-246ENST00000628343 HSD52Q0P140 79 aa7.77□□□□□ -1.17
SOX2-OT-246ENST00000628343 Q1RN00 199 aa7.77□□□□□ -1.17
SOX2-OT-246ENST00000628343 LAMTOR3Q9UHA4 124 aa7.77□□□□□ -1.17
SOX2-OT-246ENST00000628343 TMEM238LA0A1B0GVL6 79 aa7.76□□□□□ -1.17
SOX2-OT-246ENST00000628343 A6NJY4 79 aa7.76□□□□□ -1.17
SOX2-OT-246ENST00000628343 SLC25A20O43772 301 aa7.76□□□□□ -1.17
SOX2-OT-246ENST00000628343 SPINK1P00995 79 aa7.76□□□□□ -1.17
SOX2-OT-246ENST00000628343 BVES-AS1Q5T3Y7 98 aa7.76□□□□□ -1.17
SOX2-OT-246ENST00000628343 SMIM29Q86T20 159 aa7.76□□□□□ -1.17
SOX2-OT-246ENST00000628343 LPAP08519 4548 aa7.75□□□□□ -1.17
SOX2-OT-246ENST00000628343 hADV29S1A0JD25 119 aa7.75□□□□□ -1.17
SOX2-OT-246ENST00000628343 Q8N377 158 aa7.75□□□□□ -1.17
SOX2-OT-246ENST00000628343 PRO1854Q9UHT4 67 aa7.74□□□□□ -1.17
SOX2-OT-246ENST00000628343 Q6ZQY7 126 aa7.73□□□□□ -1.17
SOX2-OT-246ENST00000628343 RPS29P62273 56 aaKnown RBP7.72□□□□□ -1.17
SOX2-OT-246ENST00000628343 PRO1933Q9H354 126 aa7.72□□□□□ -1.17
SOX2-OT-246ENST00000628343 K7ERJ3 54 aa7.71□□□□□ -1.18
SOX2-OT-246ENST00000628343 SMIM6P0DI80 62 aa7.71□□□□□ -1.18
SOX2-OT-246ENST00000628343 FAM218AQ96MZ4 157 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms