RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 TRBV10-3A0A0K0K1G6 114 aa5.29□□□□□ -1.56
SGMS1-211ENST00000626236 DDTP30046 118 aa5.29□□□□□ -1.56
SGMS1-211ENST00000626236 LINC00337Q8N6G1 96 aa5.29□□□□□ -1.56
SGMS1-211ENST00000626236 A6NDN8 102 aa5.28□□□□□ -1.56
SGMS1-211ENST00000626236 RPL37AP61513 92 aaKnown RBP5.28□□□□□ -1.56
SGMS1-211ENST00000626236 CTAG1AP78358 180 aa5.28□□□□□ -1.56
SGMS1-211ENST00000626236 PSORS1C2Q9UIG4 136 aa5.28□□□□□ -1.56
SGMS1-211ENST00000626236 IGLV6-57P01721 117 aa5.27□□□□□ -1.57
SGMS1-211ENST00000626236 FXYD2P54710 66 aa5.27□□□□□ -1.57
SGMS1-211ENST00000626236 FAT1Q14517 4588 aa5.27□□□□□ -1.57
SGMS1-211ENST00000626236 C1orf137Q5JT78 98 aa5.27□□□□□ -1.57
SGMS1-211ENST00000626236 TMEM126AQ9H061 195 aa5.27□□□□□ -1.57
SGMS1-211ENST00000626236 TRAV23DV6A0A075B6W5 121 aa5.26□□□□□ -1.57
SGMS1-211ENST00000626236 TRAV13-2A0A0B4J235 113 aa5.26□□□□□ -1.57
SGMS1-211ENST00000626236 PRYO14603 147 aa5.26□□□□□ -1.57
SGMS1-211ENST00000626236 CFC1BP0CG36 223 aa5.26□□□□□ -1.57
SGMS1-211ENST00000626236 CFC1P0CG37 223 aa5.26□□□□□ -1.57
SGMS1-211ENST00000626236 Q5VSD8 79 aa5.26□□□□□ -1.57
SGMS1-211ENST00000626236 REG3GQ6UW15 175 aa5.26□□□□□ -1.57
SGMS1-211ENST00000626236 Q8N1X5 172 aa5.26□□□□□ -1.57
SGMS1-211ENST00000626236 RAB37Q96AX2 223 aa5.26□□□□□ -1.57
SGMS1-211ENST00000626236 VPS13BQ7Z7G8 4022 aa5.26□□□□□ -1.57
SGMS1-211ENST00000626236 HERC2O95714 4834 aa5.26□□□□□ -1.57
SGMS1-211ENST00000626236 RPL13AP40429 203 aaKnown RBP5.25□□□□□ -1.57
SGMS1-211ENST00000626236 HINT1P49773 126 aaPredicted RBP5.25□□□□□ -1.57
SGMS1-211ENST00000626236 KRTAP17-1Q9BYP8 105 aa5.25□□□□□ -1.57
SGMS1-211ENST00000626236 KCNQ1DNQ9H478 68 aa5.25□□□□□ -1.57
SGMS1-211ENST00000626236 NHP2Q9NX24 153 aaKnown RBP5.25□□□□□ -1.57
SGMS1-211ENST00000626236 A0A0B4J2C4 111 aa5.24□□□□□ -1.57
SGMS1-211ENST00000626236 M0R143 59 aa5.24□□□□□ -1.57
SGMS1-211ENST00000626236 BCE1O60756 84 aa5.24□□□□□ -1.57
SGMS1-211ENST00000626236 BVES-AS1Q5T3Y7 98 aa5.24□□□□□ -1.57
SGMS1-211ENST00000626236 SVIPQ8NHG7 77 aa5.24□□□□□ -1.57
SGMS1-211ENST00000626236 CBY1Q9Y3M2 126 aa5.24□□□□□ -1.57
SGMS1-211ENST00000626236 H7C2G1 150 aa5.23□□□□□ -1.57
SGMS1-211ENST00000626236 K7ERJ3 54 aa5.23□□□□□ -1.57
SGMS1-211ENST00000626236 ZNF73O43830 326 aaPredicted RBP5.23□□□□□ -1.57
SGMS1-211ENST00000626236 IGLV7-43P04211 117 aa5.23□□□□□ -1.57
SGMS1-211ENST00000626236 FAM19A1Q7Z5A9 133 aa5.23□□□□□ -1.57
SGMS1-211ENST00000626236 ETDCA0A1B0GVM5 59 aa5.22□□□□□ -1.57
SGMS1-211ENST00000626236 PCP4L1A6NKN8 68 aa5.22□□□□□ -1.57
SGMS1-211ENST00000626236 SPRR1AP35321 89 aa5.22□□□□□ -1.57
SGMS1-211ENST00000626236 UBE2AP49459 152 aa5.22□□□□□ -1.57
SGMS1-211ENST00000626236 KRTAP10-4P60372 401 aaPredicted RBP5.22□□□□□ -1.57
SGMS1-211ENST00000626236 BATFQ16520 125 aa5.22□□□□□ -1.57
SGMS1-211ENST00000626236 Q1RN00 199 aa5.22□□□□□ -1.57
SGMS1-211ENST00000626236 KRTAP19-4Q3LI73 84 aa5.22□□□□□ -1.57
SGMS1-211ENST00000626236 SMIM11BQ8TCY0 68 aa5.22□□□□□ -1.57
SGMS1-211ENST00000626236 DIRC1Q969H9 104 aa5.22□□□□□ -1.57
SGMS1-211ENST00000626236 PRO1854Q9UHT4 67 aa5.22□□□□□ -1.57
SGMS1-211ENST00000626236 PKHD1L1Q86WI1 4243 aa5.21□□□□□ -1.58
SGMS1-211ENST00000626236 SRRM2Q9UQ35 2752 aaKnown RBP5.21□□□□□ -1.58
SGMS1-211ENST00000626236 PRLHP81277 87 aa5.21□□□□□ -1.58
SGMS1-211ENST00000626236 C6orf99Q4VX62 202 aa5.21□□□□□ -1.58
SGMS1-211ENST00000626236 A0A1B0GWB2 263 aa5.2□□□□□ -1.58
SGMS1-211ENST00000626236 KRTAP4-16G5E9R7 235 aaPredicted RBP5.2□□□□□ -1.58
SGMS1-211ENST00000626236 RPL28P46779 137 aaKnown RBP5.2□□□□□ -1.58
SGMS1-211ENST00000626236 B5MCH6 92 aa5.19□□□□□ -1.58
SGMS1-211ENST00000626236 ZNF861PO60384 105 aa5.19□□□□□ -1.58
SGMS1-211ENST00000626236 COX7BP24311 80 aa5.19□□□□□ -1.58
SGMS1-211ENST00000626236 Q6ZRX8 168 aa5.19□□□□□ -1.58
SGMS1-211ENST00000626236 KRTAP13-1Q8IUC0 172 aa5.19□□□□□ -1.58
SGMS1-211ENST00000626236 ABCA13Q86UQ4 5058 aa5.19□□□□□ -1.58
SGMS1-211ENST00000626236 H0Y9J4 135 aa5.18□□□□□ -1.58
SGMS1-211ENST00000626236 TSPAN13O95857 204 aa5.18□□□□□ -1.58
SGMS1-211ENST00000626236 ELOF1P60002 83 aaKnown RBP5.18□□□□□ -1.58
SGMS1-211ENST00000626236 LCE4AQ5TA78 99 aa5.18□□□□□ -1.58
SGMS1-211ENST00000626236 SPINK6Q6UWN8 80 aa5.18□□□□□ -1.58
SGMS1-211ENST00000626236 HIGD2AQ9BW72 106 aa5.18□□□□□ -1.58
SGMS1-211ENST00000626236 KRTAP4-5Q9BYR2 181 aa5.18□□□□□ -1.58
SGMS1-211ENST00000626236 TRBV7-6A0A0J9YX20 115 aa5.17□□□□□ -1.58
SGMS1-211ENST00000626236 PSMB2P49721 201 aa5.17□□□□□ -1.58
SGMS1-211ENST00000626236 VAMP3Q15836 100 aa5.17□□□□□ -1.58
SGMS1-211ENST00000626236 LCE1DQ5T752 114 aa5.17□□□□□ -1.58
SGMS1-211ENST00000626236 SMCR5Q8TEV8 140 aa5.17□□□□□ -1.58
SGMS1-211ENST00000626236 TRIAP1O43715 76 aa5.16□□□□□ -1.58
SGMS1-211ENST00000626236 Q9BRP9 147 aa5.16□□□□□ -1.58
SGMS1-211ENST00000626236 SNHG12Q9BXW3 62 aa5.16□□□□□ -1.58
SGMS1-211ENST00000626236 KRTAP4-7Q9BYR0 210 aa5.16□□□□□ -1.58
SGMS1-211ENST00000626236 INAFM2P0DMQ5 153 aa5.15□□□□□ -1.59
SGMS1-211ENST00000626236 DHRS4-AS1Q9P1J3 65 aa5.15□□□□□ -1.59
SGMS1-211ENST00000626236 ERC2-IT1O76042 136 aa5.14□□□□□ -1.59
SGMS1-211ENST00000626236 NAA38Q9BRA0 125 aaKnown RBP5.14□□□□□ -1.59
SGMS1-211ENST00000626236 H0YGX0 51 aa5.13□□□□□ -1.59
SGMS1-211ENST00000626236 SLC25A20O43772 301 aa5.13□□□□□ -1.59
SGMS1-211ENST00000626236 COX6CP09669 75 aa5.13□□□□□ -1.59
SGMS1-211ENST00000626236 LINC00575Q6W349 94 aa5.13□□□□□ -1.59
SGMS1-211ENST00000626236 hADV29S1A0JD25 119 aa5.12□□□□□ -1.59
SGMS1-211ENST00000626236 SCGB1C2P0DMR2 95 aa5.12□□□□□ -1.59
SGMS1-211ENST00000626236 CLEC2BQ92478 149 aa5.12□□□□□ -1.59
SGMS1-211ENST00000626236 ZNF706Q9Y5V0 76 aaPredicted RBP5.12□□□□□ -1.59
SGMS1-211ENST00000626236 PCLOQ9Y6V0 5065 aa5.12□□□□□ -1.59
SGMS1-211ENST00000626236 KRTAP9-7A8MTY7 169 aa5.11□□□□□ -1.59
SGMS1-211ENST00000626236 H3BUT2 72 aa5.11□□□□□ -1.59
SGMS1-211ENST00000626236 TAX1BP3O14907 124 aa5.11□□□□□ -1.59
SGMS1-211ENST00000626236 COL5A1-AS1Q5SY13 56 aa5.11□□□□□ -1.59
SGMS1-211ENST00000626236 ST20-AS1Q8NBB2 130 aa5.11□□□□□ -1.59
SGMS1-211ENST00000626236 FAM218AQ96MZ4 157 aa5.11□□□□□ -1.59
SGMS1-211ENST00000626236 SPRR4Q96PI1 79 aa5.11□□□□□ -1.59
SGMS1-211ENST00000626236 C9orf118A6NHY6 69 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms