RNA–Protein interactions for RNA: ENST00000624909.1

PCDHB9-203, Transcript of protocadherin beta 9, humanhuman

TSL 3

Gene PCDHB9, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-203ENST00000624909 COX8AP10176 69 aa4.99□□□□□ -1.61
PCDHB9-203ENST00000624909 C1orf137Q5JT78 98 aa4.99□□□□□ -1.61
PCDHB9-203ENST00000624909 ADAMTSL4-AS1Q5T5F5 129 aa4.99□□□□□ -1.61
PCDHB9-203ENST00000624909 PCP2Q8IVA1 136 aa4.99□□□□□ -1.61
PCDHB9-203ENST00000624909 LINC00308Q8TCZ7 52 aa4.99□□□□□ -1.61
PCDHB9-203ENST00000624909 BCE1O60756 84 aa4.98□□□□□ -1.61
PCDHB9-203ENST00000624909 IGLV7-43P04211 117 aa4.98□□□□□ -1.61
PCDHB9-203ENST00000624909 SRSF9Q13242 221 aaKnown RBP eCLIP4.98□□□□□ -1.61
PCDHB9-203ENST00000624909 H0Y9J4 135 aa4.97□□□□□ -1.61
PCDHB9-203ENST00000624909 ZNF861PO60384 105 aa4.97□□□□□ -1.61
PCDHB9-203ENST00000624909 OXTP01178 125 aa4.97□□□□□ -1.61
PCDHB9-203ENST00000624909 RPL28P46779 137 aaKnown RBP4.97□□□□□ -1.61
PCDHB9-203ENST00000624909 REG3GQ6UW15 175 aa4.97□□□□□ -1.61
PCDHB9-203ENST00000624909 DAND5Q8N907 189 aa4.97□□□□□ -1.61
PCDHB9-203ENST00000624909 DIRC1Q969H9 104 aa4.97□□□□□ -1.61
PCDHB9-203ENST00000624909 KCNQ1DNQ9H478 68 aa4.97□□□□□ -1.61
PCDHB9-203ENST00000624909 MYCBP2O75592 4640 aa4.97□□□□□ -1.61
PCDHB9-203ENST00000624909 IGLV6-57P01721 117 aa4.96□□□□□ -1.62
PCDHB9-203ENST00000624909 SPATA45Q537H7 98 aa4.96□□□□□ -1.62
PCDHB9-203ENST00000624909 PYY3Q5JQD4 70 aa4.96□□□□□ -1.62
PCDHB9-203ENST00000624909 S100A7L2Q5SY68 101 aa4.96□□□□□ -1.62
PCDHB9-203ENST00000624909 SLC25A34Q6PIV7 304 aa4.96□□□□□ -1.62
PCDHB9-203ENST00000624909 TTTY13Q9BZ97 58 aa4.96□□□□□ -1.62
PCDHB9-203ENST00000624909 TMEM126AQ9H061 195 aa4.96□□□□□ -1.62
PCDHB9-203ENST00000624909 HIGD1BQ9P298 99 aa4.96□□□□□ -1.62
PCDHB9-203ENST00000624909 IGKV2-28A0A075B6P5 120 aa4.95□□□□□ -1.62
PCDHB9-203ENST00000624909 RPL37AP8A6NKH3 93 aa4.95□□□□□ -1.62
PCDHB9-203ENST00000624909 IGKV2D-28P01615 120 aa4.95□□□□□ -1.62
PCDHB9-203ENST00000624909 DDTP30046 118 aa4.95□□□□□ -1.62
PCDHB9-203ENST00000624909 HNRNPA3P51991 378 aaKnown RBP4.95□□□□□ -1.62
PCDHB9-203ENST00000624909 LINC00337Q8N6G1 96 aa4.95□□□□□ -1.62
PCDHB9-203ENST00000624909 PAM16Q9Y3D7 125 aa4.95□□□□□ -1.62
PCDHB9-203ENST00000624909 ABCA13Q86UQ4 5058 aa4.95□□□□□ -1.62
PCDHB9-203ENST00000624909 TRAV13-2A0A0B4J235 113 aa4.94□□□□□ -1.62
PCDHB9-203ENST00000624909 KRTAP29-1A8MX34 341 aaPredicted RBP4.94□□□□□ -1.62
PCDHB9-203ENST00000624909 SPRR1AP35321 89 aa4.94□□□□□ -1.62
PCDHB9-203ENST00000624909 HINT1P49773 126 aaPredicted RBP4.94□□□□□ -1.62
PCDHB9-203ENST00000624909 SOSTDC1Q6X4U4 206 aa4.94□□□□□ -1.62
PCDHB9-203ENST00000624909 Q8NDZ9 215 aa4.94□□□□□ -1.62
PCDHB9-203ENST00000624909 TRBV10-3A0A0K0K1G6 114 aa4.93□□□□□ -1.62
PCDHB9-203ENST00000624909 NCR3O14931 201 aa4.93□□□□□ -1.62
PCDHB9-203ENST00000624909 UBE2AP49459 152 aa4.93□□□□□ -1.62
PCDHB9-203ENST00000624909 TAL2Q16559 108 aa4.93□□□□□ -1.62
PCDHB9-203ENST00000624909 KRTAP11-1Q8IUC1 163 aa4.93□□□□□ -1.62
PCDHB9-203ENST00000624909 MUSTN1Q8IVN3 82 aa4.93□□□□□ -1.62
PCDHB9-203ENST00000624909 PCLOQ9Y6V0 5065 aa4.93□□□□□ -1.62
PCDHB9-203ENST00000624909 DMBT1Q9UGM3 2413 aaPredicted RBP4.92□□□□□ -1.62
PCDHB9-203ENST00000624909 TRAV23DV6A0A075B6W5 121 aa4.92□□□□□ -1.62
PCDHB9-203ENST00000624909 TRBV7-6A0A0J9YX20 115 aa4.92□□□□□ -1.62
PCDHB9-203ENST00000624909 SMIM6P0DI80 62 aa4.92□□□□□ -1.62
PCDHB9-203ENST00000624909 NPC2P61916 151 aa4.92□□□□□ -1.62
PCDHB9-203ENST00000624909 KRTAP13-1Q8IUC0 172 aa4.92□□□□□ -1.62
PCDHB9-203ENST00000624909 C14orf144Q96I85 54 aa4.92□□□□□ -1.62
PCDHB9-203ENST00000624909 HIST1H4GQ99525 98 aa4.92□□□□□ -1.62
PCDHB9-203ENST00000624909 FLG2Q5D862 2391 aaPredicted RBP4.92□□□□□ -1.62
PCDHB9-203ENST00000624909 ETDCA0A1B0GVM5 59 aa4.91□□□□□ -1.62
PCDHB9-203ENST00000624909 KRTAP4-16G5E9R7 235 aaPredicted RBP4.91□□□□□ -1.62
PCDHB9-203ENST00000624909 FAM19A1Q7Z5A9 133 aa4.91□□□□□ -1.62
PCDHB9-203ENST00000624909 OR13C6PQ8NH95 151 aa4.91□□□□□ -1.62
PCDHB9-203ENST00000624909 LINC01600Q96MT4 127 aa4.91□□□□□ -1.62
PCDHB9-203ENST00000624909 PKHD1L1Q86WI1 4243 aa4.9□□□□□ -1.62
PCDHB9-203ENST00000624909 A4D1N5 150 aa4.9□□□□□ -1.63
PCDHB9-203ENST00000624909 ZNF73O43830 326 aaPredicted RBP4.9□□□□□ -1.63
PCDHB9-203ENST00000624909 UQCR10Q9UDW1 63 aa4.9□□□□□ -1.63
PCDHB9-203ENST00000624909 ZNF706Q9Y5V0 76 aaPredicted RBP4.9□□□□□ -1.63
PCDHB9-203ENST00000624909 RPL13AP40429 203 aaKnown RBP4.89□□□□□ -1.63
PCDHB9-203ENST00000624909 LRP1Q07954 4544 aaKnown RBP4.88□□□□□ -1.63
PCDHB9-203ENST00000624909 A6NDN8 102 aa4.88□□□□□ -1.63
PCDHB9-203ENST00000624909 FAM229BQ4G0N7 80 aa4.88□□□□□ -1.63
PCDHB9-203ENST00000624909 Q6ZRX8 168 aa4.88□□□□□ -1.63
PCDHB9-203ENST00000624909 DHRS4-AS1Q9P1J3 65 aa4.88□□□□□ -1.63
PCDHB9-203ENST00000624909 FAT3Q8TDW7 4589 aa4.87□□□□□ -1.63
PCDHB9-203ENST00000624909 VAMP3Q15836 100 aa4.87□□□□□ -1.63
PCDHB9-203ENST00000624909 C2orf91Q6ZV80 131 aa4.87□□□□□ -1.63
PCDHB9-203ENST00000624909 CEND1Q8N111 149 aa4.87□□□□□ -1.63
PCDHB9-203ENST00000624909 NHP2Q9NX24 153 aaKnown RBP4.87□□□□□ -1.63
PCDHB9-203ENST00000624909 A0A0B4J2C4 111 aa4.86□□□□□ -1.63
PCDHB9-203ENST00000624909 A0A1B0GWB2 263 aa4.86□□□□□ -1.63
PCDHB9-203ENST00000624909 ELOF1P60002 83 aaKnown RBP4.86□□□□□ -1.63
PCDHB9-203ENST00000624909 CTAG1AP78358 180 aa4.86□□□□□ -1.63
PCDHB9-203ENST00000624909 PRLHP81277 87 aa4.86□□□□□ -1.63
PCDHB9-203ENST00000624909 HSD52Q0P140 79 aa4.86□□□□□ -1.63
PCDHB9-203ENST00000624909 HIGD2AQ9BW72 106 aa4.86□□□□□ -1.63
PCDHB9-203ENST00000624909 CRYGAP11844 174 aa4.85□□□□□ -1.63
PCDHB9-203ENST00000624909 COX7BP24311 80 aa4.85□□□□□ -1.63
PCDHB9-203ENST00000624909 BVES-AS1Q5T3Y7 98 aa4.85□□□□□ -1.63
PCDHB9-203ENST00000624909 LOC105371267A0A1B0GV96 52 aa4.84□□□□□ -1.63
PCDHB9-203ENST00000624909 TSTD3H0UI37 97 aa4.84□□□□□ -1.63
PCDHB9-203ENST00000624909 SNCGO76070 127 aa4.84□□□□□ -1.63
PCDHB9-203ENST00000624909 KRTAP1-4P0C5Y4 121 aa4.84□□□□□ -1.63
PCDHB9-203ENST00000624909 KRTAP10-8P60410 259 aa4.84□□□□□ -1.63
PCDHB9-203ENST00000624909 C6orf99Q4VX62 202 aa4.84□□□□□ -1.63
PCDHB9-203ENST00000624909 RAB37Q96AX2 223 aa4.84□□□□□ -1.63
PCDHB9-203ENST00000624909 SLC25A20O43772 301 aa4.83□□□□□ -1.64
PCDHB9-203ENST00000624909 CFC1BP0CG36 223 aa4.83□□□□□ -1.64
PCDHB9-203ENST00000624909 CFC1P0CG37 223 aa4.83□□□□□ -1.64
PCDHB9-203ENST00000624909 SMIM11BQ8TCY0 68 aa4.83□□□□□ -1.64
PCDHB9-203ENST00000624909 SMCR5Q8TEV8 140 aa4.83□□□□□ -1.64
PCDHB9-203ENST00000624909 SPRR4Q96PI1 79 aa4.83□□□□□ -1.64
PCDHB9-203ENST00000624909 PRO1854Q9UHT4 67 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms