RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 COPS9Q8WXC6 57 aa8.28□□□□□ -1.08
PCDHGC3-208ENST00000622836 CBY1Q9Y3M2 126 aa8.28□□□□□ -1.08
PCDHGC3-208ENST00000622836 ZNF706Q9Y5V0 76 aaPredicted RBP8.28□□□□□ -1.08
PCDHGC3-208ENST00000622836 SCGB1D1O95968 90 aa8.27□□□□□ -1.09
PCDHGC3-208ENST00000622836 KRTAP4-16G5E9R7 235 aaPredicted RBP8.26□□□□□ -1.09
PCDHGC3-208ENST00000622836 SMCR5Q8TEV8 140 aa8.26□□□□□ -1.09
PCDHGC3-208ENST00000622836 SPANXDQ9BXN6 97 aa8.26□□□□□ -1.09
PCDHGC3-208ENST00000622836 C5orf52A6NGY3 159 aa8.25□□□□□ -1.09
PCDHGC3-208ENST00000622836 B5MCH6 92 aa8.25□□□□□ -1.09
PCDHGC3-208ENST00000622836 ZNF73O43830 326 aaPredicted RBP8.25□□□□□ -1.09
PCDHGC3-208ENST00000622836 LINC00518Q8N0U6 118 aa8.25□□□□□ -1.09
PCDHGC3-208ENST00000622836 HINT1P49773 126 aaPredicted RBP8.24□□□□□ -1.09
PCDHGC3-208ENST00000622836 JOSD1Q15040 202 aaPredicted RBP8.24□□□□□ -1.09
PCDHGC3-208ENST00000622836 Q6ZVH6 145 aa8.24□□□□□ -1.09
PCDHGC3-208ENST00000622836 SPRR4Q96PI1 79 aa8.24□□□□□ -1.09
PCDHGC3-208ENST00000622836 TSPAN13O95857 204 aa8.23□□□□□ -1.09
PCDHGC3-208ENST00000622836 IFITM1P13164 125 aa8.23□□□□□ -1.09
PCDHGC3-208ENST00000622836 Q6ZRX8 168 aa8.23□□□□□ -1.09
PCDHGC3-208ENST00000622836 KRTAP13-2Q52LG2 175 aa8.22□□□□□ -1.09
PCDHGC3-208ENST00000622836 PPDPFQ9H3Y8 114 aa8.22□□□□□ -1.09
PCDHGC3-208ENST00000622836 MUSTN1Q8IVN3 82 aa8.21□□□□□ -1.1
PCDHGC3-208ENST00000622836 GAGE2AQ6NT46 116 aa8.2□□□□□ -1.1
PCDHGC3-208ENST00000622836 A6NDN8 102 aa8.19□□□□□ -1.1
PCDHGC3-208ENST00000622836 ERC2-IT1O76042 136 aa8.19□□□□□ -1.1
PCDHGC3-208ENST00000622836 C3orf22Q8N5N4 141 aa8.19□□□□□ -1.1
PCDHGC3-208ENST00000622836 LINC00304Q8N9R0 145 aa8.19□□□□□ -1.1
PCDHGC3-208ENST00000622836 Q9BRP9 147 aa8.19□□□□□ -1.1
PCDHGC3-208ENST00000622836 PRR4Q16378 134 aa8.17□□□□□ -1.1
PCDHGC3-208ENST00000622836 C6orf99Q4VX62 202 aa8.16□□□□□ -1.1
PCDHGC3-208ENST00000622836 COX7BP24311 80 aa8.15□□□□□ -1.1
PCDHGC3-208ENST00000622836 LINC00483Q53H64 154 aa8.15□□□□□ -1.1
PCDHGC3-208ENST00000622836 IGLV9-49A0A0B4J1Y8 123 aa8.14□□□□□ -1.11
PCDHGC3-208ENST00000622836 TRAV13-2A0A0B4J235 113 aa8.14□□□□□ -1.11
PCDHGC3-208ENST00000622836 C4orf48Q5BLP8 95 aa8.14□□□□□ -1.11
PCDHGC3-208ENST00000622836 DHRS4-AS1Q9P1J3 65 aa8.14□□□□□ -1.11
PCDHGC3-208ENST00000622836 COX8AP10176 69 aa8.13□□□□□ -1.11
PCDHGC3-208ENST00000622836 PAM16Q9Y3D7 125 aa8.13□□□□□ -1.11
PCDHGC3-208ENST00000622836 ELOF1P60002 83 aaKnown RBP8.12□□□□□ -1.11
PCDHGC3-208ENST00000622836 ST20-AS1Q8NBB2 130 aa8.12□□□□□ -1.11
PCDHGC3-208ENST00000622836 HIST1H4GQ99525 98 aa8.12□□□□□ -1.11
PCDHGC3-208ENST00000622836 VAMP8Q9BV40 100 aa8.12□□□□□ -1.11
PCDHGC3-208ENST00000622836 TMA7Q9Y2S6 64 aaKnown RBP8.12□□□□□ -1.11
PCDHGC3-208ENST00000622836 MOBPQ13875 183 aa8.11□□□□□ -1.11
PCDHGC3-208ENST00000622836 SPATA45Q537H7 98 aa8.11□□□□□ -1.11
PCDHGC3-208ENST00000622836 SPAG11AQ6PDA7 123 aa8.11□□□□□ -1.11
PCDHGC3-208ENST00000622836 Q8NBF4 154 aa8.11□□□□□ -1.11
PCDHGC3-208ENST00000622836 C14orf144Q96I85 54 aa8.11□□□□□ -1.11
PCDHGC3-208ENST00000622836 LRP2P98164 4655 aa8.1□□□□□ -1.11
PCDHGC3-208ENST00000622836 UBR4Q5T4S7 5183 aa8.1□□□□□ -1.11
PCDHGC3-208ENST00000622836 A4D1N5 150 aa8.1□□□□□ -1.11
PCDHGC3-208ENST00000622836 TRBV7-6A0A0J9YX20 115 aa8.09□□□□□ -1.11
PCDHGC3-208ENST00000622836 C9orf153Q5TBE3 101 aa8.09□□□□□ -1.11
PCDHGC3-208ENST00000622836 A0A1B0GWB2 263 aa8.08□□□□□ -1.12
PCDHGC3-208ENST00000622836 DLEU1O43261 78 aa8.08□□□□□ -1.12
PCDHGC3-208ENST00000622836 RETNLBQ9BQ08 111 aa8.08□□□□□ -1.12
PCDHGC3-208ENST00000622836 CTAG1AP78358 180 aa8.07□□□□□ -1.12
PCDHGC3-208ENST00000622836 SLC25A34Q6PIV7 304 aa8.07□□□□□ -1.12
PCDHGC3-208ENST00000622836 SMIM11BQ8TCY0 68 aa8.07□□□□□ -1.12
PCDHGC3-208ENST00000622836 C12orf57Q99622 126 aa8.07□□□□□ -1.12
PCDHGC3-208ENST00000622836 VAMP3Q15836 100 aa8.06□□□□□ -1.12
PCDHGC3-208ENST00000622836 TAL2Q16559 108 aa8.06□□□□□ -1.12
PCDHGC3-208ENST00000622836 SSBP3-AS1Q7Z2R9 100 aa8.06□□□□□ -1.12
PCDHGC3-208ENST00000622836 DEFB105AQ8NG35 78 aa8.06□□□□□ -1.12
PCDHGC3-208ENST00000622836 SPINK1P00995 79 aa8.04□□□□□ -1.12
PCDHGC3-208ENST00000622836 NHP2Q9NX24 153 aaKnown RBP8.04□□□□□ -1.12
PCDHGC3-208ENST00000622836 LAMTOR3Q9UHA4 124 aa8.04□□□□□ -1.12
PCDHGC3-208ENST00000622836 SLC25A20O43772 301 aa8.03□□□□□ -1.12
PCDHGC3-208ENST00000622836 HIGD1BQ9P298 99 aa8.03□□□□□ -1.12
PCDHGC3-208ENST00000622836 SPRR1BP22528 89 aa8.02□□□□□ -1.13
PCDHGC3-208ENST00000622836 TEX49A0A1B0GTD5 131 aa8.01□□□□□ -1.13
PCDHGC3-208ENST00000622836 Q1RN00 199 aa8.01□□□□□ -1.13
PCDHGC3-208ENST00000622836 PYY3Q5JQD4 70 aa8.01□□□□□ -1.13
PCDHGC3-208ENST00000622836 RAB37Q96AX2 223 aa8.01□□□□□ -1.13
PCDHGC3-208ENST00000622836 H7C2G1 150 aa8□□□□□ -1.13
PCDHGC3-208ENST00000622836 IGLV7-46A0A075B6I9 117 aa7.99□□□□□ -1.13
PCDHGC3-208ENST00000622836 C2orf91Q6ZV80 131 aa7.99□□□□□ -1.13
PCDHGC3-208ENST00000622836 LPAP08519 4548 aa7.99□□□□□ -1.13
PCDHGC3-208ENST00000622836 hADV29S1A0JD25 119 aa7.97□□□□□ -1.13
PCDHGC3-208ENST00000622836 CFC1BP0CG36 223 aa7.97□□□□□ -1.13
PCDHGC3-208ENST00000622836 CFC1P0CG37 223 aa7.97□□□□□ -1.13
PCDHGC3-208ENST00000622836 BVES-AS1Q5T3Y7 98 aa7.97□□□□□ -1.13
PCDHGC3-208ENST00000622836 LINC00575Q6W349 94 aa7.97□□□□□ -1.13
PCDHGC3-208ENST00000622836 IGLV5-48A0A075B6I7 105 aa7.96□□□□□ -1.14
PCDHGC3-208ENST00000622836 TMEM238LA0A1B0GVL6 79 aa7.96□□□□□ -1.14
PCDHGC3-208ENST00000622836 A6NJY4 79 aa7.96□□□□□ -1.14
PCDHGC3-208ENST00000622836 RPS29P62273 56 aaKnown RBP7.96□□□□□ -1.14
PCDHGC3-208ENST00000622836 CEND1Q8N111 149 aa7.96□□□□□ -1.14
PCDHGC3-208ENST00000622836 A0A0B4J2C4 111 aa7.95□□□□□ -1.14
PCDHGC3-208ENST00000622836 HRCT1Q6UXD1 115 aa7.95□□□□□ -1.14
PCDHGC3-208ENST00000622836 PRO1933Q9H354 126 aa7.95□□□□□ -1.14
PCDHGC3-208ENST00000622836 LINC01547P58512 204 aaPredicted RBP7.94□□□□□ -1.14
PCDHGC3-208ENST00000622836 FP248Q71RG6 208 aaPredicted RBP7.94□□□□□ -1.14
PCDHGC3-208ENST00000622836 CDIP1Q9H305 208 aa7.94□□□□□ -1.14
PCDHGC3-208ENST00000622836 Q6ZQY7 126 aa7.93□□□□□ -1.14
PCDHGC3-208ENST00000622836 F8WEM9 126 aa7.92□□□□□ -1.14
PCDHGC3-208ENST00000622836 TPRXLQ17RH7 258 aa7.92□□□□□ -1.14
PCDHGC3-208ENST00000622836 SMIM29Q86T20 159 aa7.92□□□□□ -1.14
PCDHGC3-208ENST00000622836 Q8N377 158 aa7.92□□□□□ -1.14
PCDHGC3-208ENST00000622836 SNCGO76070 127 aa7.91□□□□□ -1.14
PCDHGC3-208ENST00000622836 LIMD2Q9BT23 127 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms