RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 CRYGAP11844 174 aa6.13□□□□□ -1.43
PDPN-212ENST00000621990 SERTAD4-AS1Q5TG53 156 aa6.13□□□□□ -1.43
PDPN-212ENST00000621990 C9orf153Q5TBE3 101 aa6.13□□□□□ -1.43
PDPN-212ENST00000621990 COL6A5A8TX70 2615 aa6.13□□□□□ -1.43
PDPN-212ENST00000621990 C7orf33Q8WU49 177 aa6.12□□□□□ -1.43
PDPN-212ENST00000621990 SERP2Q8N6R1 65 aa6.12□□□□□ -1.43
PDPN-212ENST00000621990 Q6ZVQ6 151 aa6.12□□□□□ -1.43
PDPN-212ENST00000621990 NKAPP1Q8N9T2 125 aa6.12□□□□□ -1.43
PDPN-212ENST00000621990 RMI2Q96E14 147 aa6.12□□□□□ -1.43
PDPN-212ENST00000621990 LINC01547P58512 204 aaPredicted RBP6.11□□□□□ -1.43
PDPN-212ENST00000621990 CASC10Q5T4H9 136 aa6.11□□□□□ -1.43
PDPN-212ENST00000621990 DYNC2H1Q8NCM8 4307 aaKnown RBP6.11□□□□□ -1.43
PDPN-212ENST00000621990 LYSTQ99698 3801 aa6.11□□□□□ -1.43
PDPN-212ENST00000621990 KRTAP4-16G5E9R7 235 aaPredicted RBP6.11□□□□□ -1.43
PDPN-212ENST00000621990 PRB2P02812 416 aaPredicted RBP6.11□□□□□ -1.43
PDPN-212ENST00000621990 CXCL6P80162 114 aa6.11□□□□□ -1.43
PDPN-212ENST00000621990 FAM19A1Q7Z5A9 133 aa6.11□□□□□ -1.43
PDPN-212ENST00000621990 SPRR1AP35321 89 aa6.1□□□□□ -1.43
PDPN-212ENST00000621990 IGLV1-50A0A075B6I6 118 aa6.09□□□□□ -1.43
PDPN-212ENST00000621990 KRTAP7-1Q8IUC3 87 aa6.09□□□□□ -1.43
PDPN-212ENST00000621990 PRYO14603 147 aa6.09□□□□□ -1.43
PDPN-212ENST00000621990 SEC61GP60059 68 aa6.09□□□□□ -1.43
PDPN-212ENST00000621990 COL7A1Q02388 2944 aa6.09□□□□□ -1.44
PDPN-212ENST00000621990 DNAH9Q9NYC9 4486 aa6.08□□□□□ -1.44
PDPN-212ENST00000621990 Q6ZRX8 168 aa6.08□□□□□ -1.44
PDPN-212ENST00000621990 DNAH10Q8IVF4 4471 aa6.08□□□□□ -1.44
PDPN-212ENST00000621990 BCE1O60756 84 aa6.08□□□□□ -1.44
PDPN-212ENST00000621990 DHRS4-AS1Q9P1J3 65 aa6.08□□□□□ -1.44
PDPN-212ENST00000621990 FAM168BA1KXE4 195 aa6.07□□□□□ -1.44
PDPN-212ENST00000621990 IGLV5-48A0A075B6I7 105 aa6.07□□□□□ -1.44
PDPN-212ENST00000621990 Q8N377 158 aa6.07□□□□□ -1.44
PDPN-212ENST00000621990 Q9BRP9 147 aa6.06□□□□□ -1.44
PDPN-212ENST00000621990 LOC107984640A0A0U1RRK4 108 aa6.05□□□□□ -1.44
PDPN-212ENST00000621990 HAMPP81172 84 aa6.05□□□□□ -1.44
PDPN-212ENST00000621990 CYSTM1Q9H1C7 97 aa6.05□□□□□ -1.44
PDPN-212ENST00000621990 RPL37AP8A6NKH3 93 aa6.05□□□□□ -1.44
PDPN-212ENST00000621990 MRPL55Q7Z7F7 128 aaKnown RBP6.05□□□□□ -1.44
PDPN-212ENST00000621990 TNP2Q05952 138 aa6.04□□□□□ -1.44
PDPN-212ENST00000621990 KRTAP1-5Q9BYS1 174 aa6.04□□□□□ -1.44
PDPN-212ENST00000621990 CNBPP62633 177 aaKnown RBP6.03□□□□□ -1.44
PDPN-212ENST00000621990 STAB2Q8WWQ8 2551 aa6.03□□□□□ -1.44
PDPN-212ENST00000621990 MGAM2Q2M2H8 2515 aa6.03□□□□□ -1.44
PDPN-212ENST00000621990 ETDCA0A1B0GVM5 59 aa6.03□□□□□ -1.44
PDPN-212ENST00000621990 A0A1B0GW54 56 aa6.03□□□□□ -1.44
PDPN-212ENST00000621990 SMIM20Q8N5G0 67 aa6.03□□□□□ -1.44
PDPN-212ENST00000621990 CSMD3Q7Z407 3707 aa6.02□□□□□ -1.44
PDPN-212ENST00000621990 DNAH7Q8WXX0 4024 aa6.02□□□□□ -1.45
PDPN-212ENST00000621990 FAM19A5Q7Z5A7 132 aaPredicted RBP6.01□□□□□ -1.45
PDPN-212ENST00000621990 DEFB105AQ8NG35 78 aa6.01□□□□□ -1.45
PDPN-212ENST00000621990 TRAV7A0A075B6U4 112 aa6.01□□□□□ -1.45
PDPN-212ENST00000621990 TMEM258P61165 79 aa6.01□□□□□ -1.45
PDPN-212ENST00000621990 C16orf90A8MZG2 172 aa6□□□□□ -1.45
PDPN-212ENST00000621990 APLNQ9ULZ1 77 aa6□□□□□ -1.45
PDPN-212ENST00000621990 REG3GQ6UW15 175 aa5.99□□□□□ -1.45
PDPN-212ENST00000621990 PLECQ15149 4684 aaKnown RBP5.99□□□□□ -1.45
PDPN-212ENST00000621990 ST20-AS1Q8NBB2 130 aa5.99□□□□□ -1.45
PDPN-212ENST00000621990 ERC2-IT1O76042 136 aa5.98□□□□□ -1.45
PDPN-212ENST00000621990 A0A096LNI7 61 aa5.98□□□□□ -1.45
PDPN-212ENST00000621990 NREPQ16612 68 aa5.98□□□□□ -1.45
PDPN-212ENST00000621990 SCXQ7RTU7 201 aa5.98□□□□□ -1.45
PDPN-212ENST00000621990 A0A1W2PNM2 257 aa5.97□□□□□ -1.45
PDPN-212ENST00000621990 J3QL48 77 aa5.97□□□□□ -1.45
PDPN-212ENST00000621990 RPS28P62857 69 aaKnown RBP5.97□□□□□ -1.45
PDPN-212ENST00000621990 IGKV4-1P06312 121 aa5.97□□□□□ -1.45
PDPN-212ENST00000621990 FUSP35637 526 aaKnown RBP eCLIP5.97□□□□□ -1.45
PDPN-212ENST00000621990 SPRR4Q96PI1 79 aa5.97□□□□□ -1.45
PDPN-212ENST00000621990 C1orf137Q5JT78 98 aa5.97□□□□□ -1.45
PDPN-212ENST00000621990 Q8NBF4 154 aa5.97□□□□□ -1.45
PDPN-212ENST00000621990 B9D2Q9BPU9 175 aa5.97□□□□□ -1.45
PDPN-212ENST00000621990 C3orf84H3BNL1 204 aa5.96□□□□□ -1.46
PDPN-212ENST00000621990 SMIM29Q86T20 159 aa5.96□□□□□ -1.46
PDPN-212ENST00000621990 A0A1W2PNN7 141 aa5.96□□□□□ -1.46
PDPN-212ENST00000621990 J3KT08 172 aa5.96□□□□□ -1.46
PDPN-212ENST00000621990 UBE2BP63146 152 aa5.96□□□□□ -1.46
PDPN-212ENST00000621990 KLKP1Q107X0 134 aa5.96□□□□□ -1.46
PDPN-212ENST00000621990 C14orf177Q52M58 125 aa5.96□□□□□ -1.46
PDPN-212ENST00000621990 C20orf197Q8N268 126 aa5.95□□□□□ -1.46
PDPN-212ENST00000621990 BPY2O14599 106 aa5.95□□□□□ -1.46
PDPN-212ENST00000621990 PSCAO43653 123 aa5.95□□□□□ -1.46
PDPN-212ENST00000621990 UBE2DNLQ8IWF7 75 aa5.95□□□□□ -1.46
PDPN-212ENST00000621990 DPH3Q96FX2 82 aa5.94□□□□□ -1.46
PDPN-212ENST00000621990 Q8N9L7 120 aa5.93□□□□□ -1.46
PDPN-212ENST00000621990 TENM2Q9NT68 2774 aa5.93□□□□□ -1.46
PDPN-212ENST00000621990 VPS13DQ5THJ4 4388 aa5.93□□□□□ -1.46
PDPN-212ENST00000621990 PRKDCP78527 4128 aaKnown RBP5.92□□□□□ -1.46
PDPN-212ENST00000621990 IGLV8-61A0A075B6I0 122 aa5.92□□□□□ -1.46
PDPN-212ENST00000621990 IGKV2-24A0A0C4DH68 120 aa5.92□□□□□ -1.46
PDPN-212ENST00000621990 LRCOL1A6NCL2 159 aa5.92□□□□□ -1.46
PDPN-212ENST00000621990 H0Y9J4 135 aa5.92□□□□□ -1.46
PDPN-212ENST00000621990 H7BZZ5 65 aa5.92□□□□□ -1.46
PDPN-212ENST00000621990 MDFIQ99750 246 aa5.91□□□□□ -1.46
PDPN-212ENST00000621990 STARD9Q9P2P6 4700 aa5.91□□□□□ -1.46
PDPN-212ENST00000621990 LINC00476Q8WZB0 136 aa5.91□□□□□ -1.46
PDPN-212ENST00000621990 OCR1Q9BZK8 76 aa5.91□□□□□ -1.46
PDPN-212ENST00000621990 PRLHP81277 87 aa5.9□□□□□ -1.46
PDPN-212ENST00000621990 Q6ZRN7 208 aaPredicted RBP5.9□□□□□ -1.46
PDPN-212ENST00000621990 C9orf163Q8N9P6 203 aa5.9□□□□□ -1.46
PDPN-212ENST00000621990 PKIGQ9Y2B9 76 aa5.9□□□□□ -1.46
PDPN-212ENST00000621990 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.9□□□□□ -1.46
PDPN-212ENST00000621990 NBDYA0A0U1RRE5 68 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms