RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 PRLHP81277 87 aa11.25□□□□□ -0.61
CIRBP-245ENST00000621399 OR13C6PQ8NH95 151 aa11.25□□□□□ -0.61
CIRBP-245ENST00000621399 KRTAP13-1Q8IUC0 172 aa11.24□□□□□ -0.61
CIRBP-245ENST00000621399 SLC25A34Q6PIV7 304 aa11.23□□□□□ -0.61
CIRBP-245ENST00000621399 ETDCA0A1B0GVM5 59 aa11.22□□□□□ -0.61
CIRBP-245ENST00000621399 SPRR1AP35321 89 aa11.22□□□□□ -0.61
CIRBP-245ENST00000621399 LINC00337Q8N6G1 96 aa11.22□□□□□ -0.61
CIRBP-245ENST00000621399 TRAV23DV6A0A075B6W5 121 aa11.21□□□□□ -0.61
CIRBP-245ENST00000621399 LINC01600Q96MT4 127 aa11.21□□□□□ -0.61
CIRBP-245ENST00000621399 HIST1H4GQ99525 98 aa11.21□□□□□ -0.61
CIRBP-245ENST00000621399 CBY1Q9Y3M2 126 aa11.21□□□□□ -0.61
CIRBP-245ENST00000621399 KRTAP4-16G5E9R7 235 aaPredicted RBP11.18□□□□□ -0.62
CIRBP-245ENST00000621399 ZNF73O43830 326 aaPredicted RBP11.18□□□□□ -0.62
CIRBP-245ENST00000621399 HIGD2AQ9BW72 106 aa11.18□□□□□ -0.62
CIRBP-245ENST00000621399 A6NDN8 102 aa11.17□□□□□ -0.62
CIRBP-245ENST00000621399 HIGD1BQ9P298 99 aa11.17□□□□□ -0.62
CIRBP-245ENST00000621399 A4D1N5 150 aa11.15□□□□□ -0.62
CIRBP-245ENST00000621399 B5MCH6 92 aa11.15□□□□□ -0.62
CIRBP-245ENST00000621399 KRTAP1-4P0C5Y4 121 aa11.15□□□□□ -0.62
CIRBP-245ENST00000621399 C2orf91Q6ZV80 131 aa11.15□□□□□ -0.62
CIRBP-245ENST00000621399 TRAV13-2A0A0B4J235 113 aa11.14□□□□□ -0.63
CIRBP-245ENST00000621399 MT1HL1P0DM35 61 aa11.14□□□□□ -0.63
CIRBP-245ENST00000621399 HINT1P49773 126 aaPredicted RBP11.14□□□□□ -0.63
CIRBP-245ENST00000621399 Q6ZRX8 168 aa11.12□□□□□ -0.63
CIRBP-245ENST00000621399 KRTAP10-8P60410 259 aa11.11□□□□□ -0.63
CIRBP-245ENST00000621399 PRR26Q8N8Z3 221 aa11.11□□□□□ -0.63
CIRBP-245ENST00000621399 SMCR5Q8TEV8 140 aa11.11□□□□□ -0.63
CIRBP-245ENST00000621399 C6orf99Q4VX62 202 aa11.09□□□□□ -0.63
CIRBP-245ENST00000621399 C12orf57Q99622 126 aa11.09□□□□□ -0.63
CIRBP-245ENST00000621399 TNXBP22105 4242 aa11.08□□□□□ -0.64
CIRBP-245ENST00000621399 TAL2Q16559 108 aa11.08□□□□□ -0.64
CIRBP-245ENST00000621399 Q9BRP9 147 aa11.08□□□□□ -0.64
CIRBP-245ENST00000621399 ANAPC11Q9NYG5 84 aa11.08□□□□□ -0.64
CIRBP-245ENST00000621399 UQCR10Q9UDW1 63 aa11.08□□□□□ -0.64
CIRBP-245ENST00000621399 ZNF706Q9Y5V0 76 aaPredicted RBP11.07□□□□□ -0.64
CIRBP-245ENST00000621399 SMIM6P0DI80 62 aa11.06□□□□□ -0.64
CIRBP-245ENST00000621399 COX7BP24311 80 aa11.06□□□□□ -0.64
CIRBP-245ENST00000621399 LOC105371267A0A1B0GV96 52 aa11.05□□□□□ -0.64
CIRBP-245ENST00000621399 ERC2-IT1O76042 136 aa11.05□□□□□ -0.64
CIRBP-245ENST00000621399 CRYGAP11844 174 aa11.05□□□□□ -0.64
CIRBP-245ENST00000621399 RPL13AP40429 203 aaKnown RBP11.05□□□□□ -0.64
CIRBP-245ENST00000621399 CEND1Q8N111 149 aa11.05□□□□□ -0.64
CIRBP-245ENST00000621399 SMIM11BQ8TCY0 68 aa11.05□□□□□ -0.64
CIRBP-245ENST00000621399 SPRR4Q96PI1 79 aa11.05□□□□□ -0.64
CIRBP-245ENST00000621399 A0A087X002 238 aa11.03□□□□□ -0.64
CIRBP-245ENST00000621399 TRBV7-6A0A0J9YX20 115 aa11.03□□□□□ -0.64
CIRBP-245ENST00000621399 ELOF1P60002 83 aaKnown RBP11.03□□□□□ -0.64
CIRBP-245ENST00000621399 FAM229BQ4G0N7 80 aa11.03□□□□□ -0.64
CIRBP-245ENST00000621399 CFC1BP0CG36 223 aa11.02□□□□□ -0.65
CIRBP-245ENST00000621399 CFC1P0CG37 223 aa11.02□□□□□ -0.65
CIRBP-245ENST00000621399 HSD52Q0P140 79 aa11.02□□□□□ -0.65
CIRBP-245ENST00000621399 RAB37Q96AX2 223 aa11.02□□□□□ -0.65
CIRBP-245ENST00000621399 DHRS4-AS1Q9P1J3 65 aa11.02□□□□□ -0.65
CIRBP-245ENST00000621399 TMEM238LA0A1B0GVL6 79 aa11.01□□□□□ -0.65
CIRBP-245ENST00000621399 A6NJY4 79 aa11.01□□□□□ -0.65
CIRBP-245ENST00000621399 PRO1933Q9H354 126 aa11.01□□□□□ -0.65
CIRBP-245ENST00000621399 A0A1B0GWB2 263 aa11□□□□□ -0.65
CIRBP-245ENST00000621399 GAGE2AQ6NT46 116 aa10.99□□□□□ -0.65
CIRBP-245ENST00000621399 A0A0B4J2C4 111 aa10.98□□□□□ -0.65
CIRBP-245ENST00000621399 FXYD2P54710 66 aa10.98□□□□□ -0.65
CIRBP-245ENST00000621399 VAMP3Q15836 100 aa10.98□□□□□ -0.65
CIRBP-245ENST00000621399 TYMSOSQ8TAI1 123 aa10.98□□□□□ -0.65
CIRBP-245ENST00000621399 H7C2G1 150 aa10.97□□□□□ -0.65
CIRBP-245ENST00000621399 KRTAP13-2Q52LG2 175 aa10.96□□□□□ -0.65
CIRBP-245ENST00000621399 ST20-AS1Q8NBB2 130 aa10.96□□□□□ -0.65
CIRBP-245ENST00000621399 LINC00483Q53H64 154 aa10.95□□□□□ -0.66
CIRBP-245ENST00000621399 PRO1854Q9UHT4 67 aa10.93□□□□□ -0.66
CIRBP-245ENST00000621399 C3orf22Q8N5N4 141 aa10.92□□□□□ -0.66
CIRBP-245ENST00000621399 NHP2Q9NX24 153 aaKnown RBP10.92□□□□□ -0.66
CIRBP-245ENST00000621399 SLC25A20O43772 301 aa10.91□□□□□ -0.66
CIRBP-245ENST00000621399 Q1RN00 199 aa10.91□□□□□ -0.66
CIRBP-245ENST00000621399 BVES-AS1Q5T3Y7 98 aa10.91□□□□□ -0.66
CIRBP-245ENST00000621399 LINC00575Q6W349 94 aa10.89□□□□□ -0.67
CIRBP-245ENST00000621399 DEFB105AQ8NG35 78 aa10.89□□□□□ -0.67
CIRBP-245ENST00000621399 HMCN2Q8NDA2 5059 aa10.88□□□□□ -0.67
CIRBP-245ENST00000621399 IGLV9-49A0A0B4J1Y8 123 aa10.87□□□□□ -0.67
CIRBP-245ENST00000621399 TSTD3H0UI37 97 aa10.87□□□□□ -0.67
CIRBP-245ENST00000621399 K7ERJ3 54 aa10.87□□□□□ -0.67
CIRBP-245ENST00000621399 hADV29S1A0JD25 119 aa10.86□□□□□ -0.67
CIRBP-245ENST00000621399 SPRR1BP22528 89 aa10.86□□□□□ -0.67
CIRBP-245ENST00000621399 CTAG1AP78358 180 aa10.86□□□□□ -0.67
CIRBP-245ENST00000621399 LINC00304Q8N9R0 145 aa10.85□□□□□ -0.67
CIRBP-245ENST00000621399 TEX49A0A1B0GTD5 131 aa10.84□□□□□ -0.67
CIRBP-245ENST00000621399 MOBPQ13875 183 aa10.84□□□□□ -0.67
CIRBP-245ENST00000621399 H0YGX0 51 aa10.83□□□□□ -0.68
CIRBP-245ENST00000621399 TSPAN13O95857 204 aa10.83□□□□□ -0.68
CIRBP-245ENST00000621399 IGLV5-48A0A075B6I7 105 aa10.82□□□□□ -0.68
CIRBP-245ENST00000621399 M0R143 59 aa10.82□□□□□ -0.68
CIRBP-245ENST00000621399 C9orf153Q5TBE3 101 aa10.82□□□□□ -0.68
CIRBP-245ENST00000621399 LAMTOR3Q9UHA4 124 aa10.82□□□□□ -0.68
CIRBP-245ENST00000621399 Q8NBF4 154 aa10.81□□□□□ -0.68
CIRBP-245ENST00000621399 UBR4Q5T4S7 5183 aa10.81□□□□□ -0.68
CIRBP-245ENST00000621399 PSMB2P49721 201 aa10.8□□□□□ -0.68
CIRBP-245ENST00000621399 LINC01547P58512 204 aaPredicted RBP10.8□□□□□ -0.68
CIRBP-245ENST00000621399 Q6ZQY7 126 aa10.8□□□□□ -0.68
CIRBP-245ENST00000621399 SSBP3-AS1Q7Z2R9 100 aa10.8□□□□□ -0.68
CIRBP-245ENST00000621399 TRIAP1O43715 76 aa10.79□□□□□ -0.68
CIRBP-245ENST00000621399 SNCGO76070 127 aa10.79□□□□□ -0.68
CIRBP-245ENST00000621399 C4orf48Q5BLP8 95 aa10.79□□□□□ -0.68
CIRBP-245ENST00000621399 SPAG11AQ6PDA7 123 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms