RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 IGSF10Q6WRI0 2623 aa6.55□□□□□ -1.36
CLTCL1-211ENST00000621271 Q6ZQT0 140 aa6.54□□□□□ -1.36
CLTCL1-211ENST00000621271 ACYP2P14621 99 aa6.54□□□□□ -1.36
CLTCL1-211ENST00000621271 COL27A1Q8IZC6 1860 aaPredicted RBP6.54□□□□□ -1.36
CLTCL1-211ENST00000621271 LOC110117498A0A087WWA1 95 aa6.54□□□□□ -1.36
CLTCL1-211ENST00000621271 FAM168BA1KXE4 195 aa6.53□□□□□ -1.36
CLTCL1-211ENST00000621271 C8orf87E5RJ46 101 aa6.52□□□□□ -1.36
CLTCL1-211ENST00000621271 PRUNE2Q8WUY3 3088 aa6.52□□□□□ -1.37
CLTCL1-211ENST00000621271 ZNF861PO60384 105 aa6.52□□□□□ -1.37
CLTCL1-211ENST00000621271 BPTFQ12830 3046 aa6.51□□□□□ -1.37
CLTCL1-211ENST00000621271 A0A1B0GU69 56 aa6.51□□□□□ -1.37
CLTCL1-211ENST00000621271 VPREB1P12018 145 aa6.51□□□□□ -1.37
CLTCL1-211ENST00000621271 SSBP3-AS1Q7Z2R9 100 aa6.5□□□□□ -1.37
CLTCL1-211ENST00000621271 C9orf163Q8N9P6 203 aa6.49□□□□□ -1.37
CLTCL1-211ENST00000621271 PCSK5Q92824 1860 aa6.49□□□□□ -1.37
CLTCL1-211ENST00000621271 SERTAD4-AS1Q5TG53 156 aa6.49□□□□□ -1.37
CLTCL1-211ENST00000621271 IGLV1-50A0A075B6I6 118 aa6.49□□□□□ -1.37
CLTCL1-211ENST00000621271 APLNQ9ULZ1 77 aa6.49□□□□□ -1.37
CLTCL1-211ENST00000621271 UNC79Q9P2D8 2635 aa6.48□□□□□ -1.37
CLTCL1-211ENST00000621271 LINC00528Q8N1L1 170 aa6.48□□□□□ -1.37
CLTCL1-211ENST00000621271 PRRC2CQ9Y520 2896 aaKnown RBP6.48□□□□□ -1.37
CLTCL1-211ENST00000621271 TRAV22A0A0B4J277 110 aa6.48□□□□□ -1.37
CLTCL1-211ENST00000621271 KRTAP1-3Q8IUG1 177 aa6.48□□□□□ -1.37
CLTCL1-211ENST00000621271 CENPEQ02224 2701 aa6.48□□□□□ -1.37
CLTCL1-211ENST00000621271 SETXQ7Z333 2677 aaKnown RBP6.47□□□□□ -1.37
CLTCL1-211ENST00000621271 BRCA2P51587 3418 aa6.47□□□□□ -1.37
CLTCL1-211ENST00000621271 TRBV7-4A0A0J9YYF1 115 aa6.47□□□□□ -1.37
CLTCL1-211ENST00000621271 EIF4EBP3O60516 100 aaPredicted RBP6.47□□□□□ -1.37
CLTCL1-211ENST00000621271 C9orf92A6NGG3 77 aa6.46□□□□□ -1.37
CLTCL1-211ENST00000621271 PRR34Q9NV39 138 aa6.46□□□□□ -1.37
CLTCL1-211ENST00000621271 C5orf42Q9H799 3197 aa6.46□□□□□ -1.37
CLTCL1-211ENST00000621271 H3BPC8 53 aa6.46□□□□□ -1.38
CLTCL1-211ENST00000621271 KRTAP1-1Q07627 177 aa6.45□□□□□ -1.38
CLTCL1-211ENST00000621271 ITPR3Q14573 2671 aa6.45□□□□□ -1.38
CLTCL1-211ENST00000621271 DSPP15924 2871 aaKnown RBP6.45□□□□□ -1.38
CLTCL1-211ENST00000621271 IGLV6-57P01721 117 aa6.45□□□□□ -1.38
CLTCL1-211ENST00000621271 KCNQ1DNQ9H478 68 aa6.45□□□□□ -1.38
CLTCL1-211ENST00000621271 GCN1Q92616 2671 aaKnown RBP6.45□□□□□ -1.38
CLTCL1-211ENST00000621271 IGLV7-43P04211 117 aa6.45□□□□□ -1.38
CLTCL1-211ENST00000621271 LOC101927531A0A1B0GV80 90 aa6.44□□□□□ -1.38
CLTCL1-211ENST00000621271 C15orf56Q8N910 161 aa6.44□□□□□ -1.38
CLTCL1-211ENST00000621271 A8MWP4 228 aa6.44□□□□□ -1.38
CLTCL1-211ENST00000621271 ZNF575Q86XF7 245 aa6.44□□□□□ -1.38
CLTCL1-211ENST00000621271 MRPL34Q9BQ48 92 aaKnown RBP6.44□□□□□ -1.38
CLTCL1-211ENST00000621271 TEP1Q99973 2627 aaKnown RBP6.44□□□□□ -1.38
CLTCL1-211ENST00000621271 OBSCN-AS1Q96MR7 158 aa6.44□□□□□ -1.38
CLTCL1-211ENST00000621271 ERC2-IT1O76042 136 aa6.43□□□□□ -1.38
CLTCL1-211ENST00000621271 GIG44P09565 113 aaPredicted RBP6.43□□□□□ -1.38
CLTCL1-211ENST00000621271 RBM12B-AS1Q9P1G2 102 aa6.43□□□□□ -1.38
CLTCL1-211ENST00000621271 FLNAP21333 2647 aaKnown RBP6.43□□□□□ -1.38
CLTCL1-211ENST00000621271 LINC00612Q8N6U2 182 aa6.42□□□□□ -1.38
CLTCL1-211ENST00000621271 DSCR10P59022 87 aa6.41□□□□□ -1.38
CLTCL1-211ENST00000621271 KLKP1Q107X0 134 aa6.41□□□□□ -1.38
CLTCL1-211ENST00000621271 IGLV5-37A0A075B6J1 123 aa6.41□□□□□ -1.38
CLTCL1-211ENST00000621271 CASC10Q5T4H9 136 aa6.41□□□□□ -1.38
CLTCL1-211ENST00000621271 PSORS1C2Q9UIG4 136 aa6.41□□□□□ -1.38
CLTCL1-211ENST00000621271 AKAP13Q12802 2813 aa6.4□□□□□ -1.38
CLTCL1-211ENST00000621271 TLX1NBP0CAT3 122 aa6.39□□□□□ -1.39
CLTCL1-211ENST00000621271 CNBPP62633 177 aaKnown RBP6.38□□□□□ -1.39
CLTCL1-211ENST00000621271 STAB1Q9NY15 2570 aa6.38□□□□□ -1.39
CLTCL1-211ENST00000621271 TNP2Q05952 138 aa6.38□□□□□ -1.39
CLTCL1-211ENST00000621271 LINC01600Q96MT4 127 aa6.38□□□□□ -1.39
CLTCL1-211ENST00000621271 IGLV8-61A0A075B6I0 122 aa6.38□□□□□ -1.39
CLTCL1-211ENST00000621271 C9orf129Q5T035 196 aaKnown RBP6.38□□□□□ -1.39
CLTCL1-211ENST00000621271 ANAPC11Q9NYG5 84 aa6.38□□□□□ -1.39
CLTCL1-211ENST00000621271 IGFL1Q6UW32 110 aa6.38□□□□□ -1.39
CLTCL1-211ENST00000621271 H7BZZ5 65 aa6.36□□□□□ -1.39
CLTCL1-211ENST00000621271 PLA2G2DQ9UNK4 145 aa6.36□□□□□ -1.39
CLTCL1-211ENST00000621271 A0A1W2PNN7 141 aa6.35□□□□□ -1.39
CLTCL1-211ENST00000621271 C8orf17Q9NRJ1 99 aa6.35□□□□□ -1.39
CLTCL1-211ENST00000621271 K7EQZ3 153 aa6.35□□□□□ -1.39
CLTCL1-211ENST00000621271 A0A1B0GVX0 72 aa6.34□□□□□ -1.39
CLTCL1-211ENST00000621271 SPINT4Q6UDR6 99 aa6.34□□□□□ -1.39
CLTCL1-211ENST00000621271 COL6A3P12111 3177 aa6.34□□□□□ -1.39
CLTCL1-211ENST00000621271 SZT2Q5T011 3432 aa6.34□□□□□ -1.39
CLTCL1-211ENST00000621271 TRIOO75962 3097 aa6.34□□□□□ -1.39
CLTCL1-211ENST00000621271 SPRR4Q96PI1 79 aa6.33□□□□□ -1.4
CLTCL1-211ENST00000621271 MGAQ8IWI9 3026 aa6.33□□□□□ -1.4
CLTCL1-211ENST00000621271 Q6ZSA8 131 aa6.32□□□□□ -1.4
CLTCL1-211ENST00000621271 PRR15Q8IV56 129 aa6.32□□□□□ -1.4
CLTCL1-211ENST00000621271 M0R2T5 61 aa6.31□□□□□ -1.4
CLTCL1-211ENST00000621271 IGLV7-46A0A075B6I9 117 aa6.3□□□□□ -1.4
CLTCL1-211ENST00000621271 LAMA2P24043 3122 aaKnown RBP6.3□□□□□ -1.4
CLTCL1-211ENST00000621271 A8MUN3 132 aa6.3□□□□□ -1.4
CLTCL1-211ENST00000621271 Q8N377 158 aa6.29□□□□□ -1.4
CLTCL1-211ENST00000621271 KRTAP21-3Q3LHN1 58 aa6.29□□□□□ -1.4
CLTCL1-211ENST00000621271 CYP4F30PQ9H0H9 118 aa6.29□□□□□ -1.4
CLTCL1-211ENST00000621271 A0A0G2JQZ4 141 aa6.27□□□□□ -1.41
CLTCL1-211ENST00000621271 COL6A5A8TX70 2615 aa6.26□□□□□ -1.41
CLTCL1-211ENST00000621271 LINC01554Q52M75 96 aa6.26□□□□□ -1.41
CLTCL1-211ENST00000621271 PRR26Q8N8Z3 221 aa6.25□□□□□ -1.41
CLTCL1-211ENST00000621271 COA5Q86WW8 74 aa6.25□□□□□ -1.41
CLTCL1-211ENST00000621271 CFAP54Q96N23 3096 aa6.24□□□□□ -1.41
CLTCL1-211ENST00000621271 FLNCQ14315 2725 aa6.24□□□□□ -1.41
CLTCL1-211ENST00000621271 WIPF1O43516 503 aa6.24□□□□□ -1.41
CLTCL1-211ENST00000621271 WDFY4Q6ZS81 3184 aa6.24□□□□□ -1.41
CLTCL1-211ENST00000621271 CRIPTQ9P021 101 aa6.23□□□□□ -1.41
CLTCL1-211ENST00000621271 UQCR11O14957 56 aa6.22□□□□□ -1.41
CLTCL1-211ENST00000621271 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.21□□□□□ -1.42
CLTCL1-211ENST00000621271 FAM104AQ969W3 186 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 210.7 ms