RNA–Protein interactions for RNA: ENST00000621029.4

SEMA3B-215, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-215ENST00000621029 Q6ZRX8 168 aa16.7■□□□□ 0.26
SEMA3B-215ENST00000621029 Q8NBF4 154 aa16.7■□□□□ 0.26
SEMA3B-215ENST00000621029 ZNF815PA8K554 130 aa16.69■□□□□ 0.26
SEMA3B-215ENST00000621029 IGLV7-46A0A075B6I9 117 aa16.67■□□□□ 0.26
SEMA3B-215ENST00000621029 JOSD1Q15040 202 aaPredicted RBP16.67■□□□□ 0.26
SEMA3B-215ENST00000621029 LINC00308Q8TCZ7 52 aa16.67■□□□□ 0.26
SEMA3B-215ENST00000621029 Q9BRP9 147 aa16.67■□□□□ 0.26
SEMA3B-215ENST00000621029 ZNF73O43830 326 aaPredicted RBP16.66■□□□□ 0.26
SEMA3B-215ENST00000621029 TIMM17BO60830 172 aa16.66■□□□□ 0.26
SEMA3B-215ENST00000621029 LINC00483Q53H64 154 aa16.66■□□□□ 0.26
SEMA3B-215ENST00000621029 OR13C6PQ8NH95 151 aa16.66■□□□□ 0.26
SEMA3B-215ENST00000621029 COA6Q5JTJ3 125 aaKnown RBP16.65■□□□□ 0.26
SEMA3B-215ENST00000621029 LITAFQ99732 161 aa16.65■□□□□ 0.26
SEMA3B-215ENST00000621029 IGLV9-49A0A0B4J1Y8 123 aa16.64■□□□□ 0.25
SEMA3B-215ENST00000621029 TTTY13Q9BZ97 58 aa16.64■□□□□ 0.25
SEMA3B-215ENST00000621029 SPANXCQ9NY87 97 aa16.64■□□□□ 0.25
SEMA3B-215ENST00000621029 CBY1Q9Y3M2 126 aa16.64■□□□□ 0.25
SEMA3B-215ENST00000621029 HINT1P49773 126 aaPredicted RBP16.63■□□□□ 0.25
SEMA3B-215ENST00000621029 C20orf202A1L168 122 aa16.62■□□□□ 0.25
SEMA3B-215ENST00000621029 MOBPQ13875 183 aa16.61■□□□□ 0.25
SEMA3B-215ENST00000621029 CDIP1Q9H305 208 aa16.61■□□□□ 0.25
SEMA3B-215ENST00000621029 SCGB1D4Q6XE38 83 aa16.57■□□□□ 0.24
SEMA3B-215ENST00000621029 TPRXLQ17RH7 258 aa16.56■□□□□ 0.24
SEMA3B-215ENST00000621029 SPINK1P00995 79 aa16.55■□□□□ 0.24
SEMA3B-215ENST00000621029 ATOH7Q8N100 152 aa16.54■□□□□ 0.24
SEMA3B-215ENST00000621029 SSBP3-AS1Q7Z2R9 100 aa16.53■□□□□ 0.24
SEMA3B-215ENST00000621029 SPANXDQ9BXN6 97 aa16.53■□□□□ 0.24
SEMA3B-215ENST00000621029 ST20-AS1Q8NBB2 130 aa16.52■□□□□ 0.24
SEMA3B-215ENST00000621029 C9orf153Q5TBE3 101 aa16.51■□□□□ 0.23
SEMA3B-215ENST00000621029 LINC00518Q8N0U6 118 aa16.51■□□□□ 0.23
SEMA3B-215ENST00000621029 ANKRD39Q53RE8 183 aa16.5■□□□□ 0.23
SEMA3B-215ENST00000621029 MUC2Q02817 5179 aa16.5■□□□□ 0.23
SEMA3B-215ENST00000621029 FP248Q71RG6 208 aaPredicted RBP16.49■□□□□ 0.23
SEMA3B-215ENST00000621029 AKR1D1P51857 326 aa16.46■□□□□ 0.23
SEMA3B-215ENST00000621029 COPS9Q8WXC6 57 aa16.46■□□□□ 0.23
SEMA3B-215ENST00000621029 DHRS4-AS1Q9P1J3 65 aa16.45■□□□□ 0.22
SEMA3B-215ENST00000621029 C5orf52A6NGY3 159 aa16.44■□□□□ 0.22
SEMA3B-215ENST00000621029 A0A0U1RQV1 116 aa16.43■□□□□ 0.22
SEMA3B-215ENST00000621029 COX7BP24311 80 aa16.43■□□□□ 0.22
SEMA3B-215ENST00000621029 C6orf99Q4VX62 202 aa16.42■□□□□ 0.22
SEMA3B-215ENST00000621029 PCP2Q8IVA1 136 aa16.41■□□□□ 0.22
SEMA3B-215ENST00000621029 IFITM1P13164 125 aa16.4■□□□□ 0.22
SEMA3B-215ENST00000621029 S100A2P29034 98 aa16.39■□□□□ 0.21
SEMA3B-215ENST00000621029 A6NDN8 102 aa16.38■□□□□ 0.21
SEMA3B-215ENST00000621029 SLC25A34Q6PIV7 304 aa16.38■□□□□ 0.21
SEMA3B-215ENST00000621029 ELOF1P60002 83 aaKnown RBP16.37■□□□□ 0.21
SEMA3B-215ENST00000621029 RPS29P62273 56 aaKnown RBP16.37■□□□□ 0.21
SEMA3B-215ENST00000621029 Q6ZVH6 145 aa16.37■□□□□ 0.21
SEMA3B-215ENST00000621029 MUSTN1Q8IVN3 82 aa16.36■□□□□ 0.21
SEMA3B-215ENST00000621029 SLC25A20O43772 301 aa16.35■□□□□ 0.21
SEMA3B-215ENST00000621029 SNRPEP62304 92 aaKnown RBP16.35■□□□□ 0.21
SEMA3B-215ENST00000621029 Q8N377 158 aa16.35■□□□□ 0.21
SEMA3B-215ENST00000621029 TAL2Q16559 108 aa16.33■□□□□ 0.2
SEMA3B-215ENST00000621029 HIST3H2BBQ8N257 126 aa16.33■□□□□ 0.2
SEMA3B-215ENST00000621029 DEFB105AQ8NG35 78 aa16.33■□□□□ 0.2
SEMA3B-215ENST00000621029 LAMTOR3Q9UHA4 124 aa16.33■□□□□ 0.2
SEMA3B-215ENST00000621029 SPRR1BP22528 89 aa16.32■□□□□ 0.2
SEMA3B-215ENST00000621029 S100A1P23297 94 aa16.32■□□□□ 0.2
SEMA3B-215ENST00000621029 KRTAP13-3Q3SY46 172 aa16.32■□□□□ 0.2
SEMA3B-215ENST00000621029 HIST1H2BLQ99880 126 aa16.32■□□□□ 0.2
SEMA3B-215ENST00000621029 HSBP1L1C9JCN9 74 aa16.29■□□□□ 0.2
SEMA3B-215ENST00000621029 TRBV7-6A0A0J9YX20 115 aa16.28■□□□□ 0.2
SEMA3B-215ENST00000621029 S100A6P06703 90 aa16.28■□□□□ 0.2
SEMA3B-215ENST00000621029 HRCT1Q6UXD1 115 aa16.27■□□□□ 0.2
SEMA3B-215ENST00000621029 A0A1B0GWB2 263 aa16.26■□□□□ 0.19
SEMA3B-215ENST00000621029 Q1RN00 199 aa16.25■□□□□ 0.19
SEMA3B-215ENST00000621029 TRAV13-2A0A0B4J235 113 aa16.24■□□□□ 0.19
SEMA3B-215ENST00000621029 TEX49A0A1B0GTD5 131 aa16.22■□□□□ 0.19
SEMA3B-215ENST00000621029 MUC17Q685J3 4493 aa16.21■□□□□ 0.19
SEMA3B-215ENST00000621029 LIMD2Q9BT23 127 aa16.19■□□□□ 0.18
SEMA3B-215ENST00000621029 A4D1N5 150 aa16.17■□□□□ 0.18
SEMA3B-215ENST00000621029 SMIM11BQ8TCY0 68 aa16.17■□□□□ 0.18
SEMA3B-215ENST00000621029 PRO1933Q9H354 126 aa16.16■□□□□ 0.18
SEMA3B-215ENST00000621029 NHP2Q9NX24 153 aaKnown RBP16.15■□□□□ 0.18
SEMA3B-215ENST00000621029 SCGB1D1O95968 90 aa16.14■□□□□ 0.17
SEMA3B-215ENST00000621029 SEC61BP60468 96 aaKnown RBP16.11■□□□□ 0.17
SEMA3B-215ENST00000621029 VAMP3Q15836 100 aa16.11■□□□□ 0.17
SEMA3B-215ENST00000621029 ASB16-AS1Q495Z4 193 aa16.11■□□□□ 0.17
SEMA3B-215ENST00000621029 IGLV5-48A0A075B6I7 105 aa16.09■□□□□ 0.17
SEMA3B-215ENST00000621029 SMIM29Q86T20 159 aa16.09■□□□□ 0.17
SEMA3B-215ENST00000621029 H7C2G1 150 aa16.08■□□□□ 0.16
SEMA3B-215ENST00000621029 LINC01547P58512 204 aaPredicted RBP16.08■□□□□ 0.16
SEMA3B-215ENST00000621029 FAT4Q6V0I7 4981 aa16.07■□□□□ 0.16
SEMA3B-215ENST00000621029 CD164Q04900 197 aa16.06■□□□□ 0.16
SEMA3B-215ENST00000621029 HIST1H4GQ99525 98 aa16.03■□□□□ 0.16
SEMA3B-215ENST00000621029 XP32Q5T750 250 aa16.01■□□□□ 0.15
SEMA3B-215ENST00000621029 A0A0G2JQZ4 141 aa16■□□□□ 0.15
SEMA3B-215ENST00000621029 C12orf57Q99622 126 aa16■□□□□ 0.15
SEMA3B-215ENST00000621029 LINC00575Q6W349 94 aa15.98■□□□□ 0.15
SEMA3B-215ENST00000621029 F8WEM9 126 aa15.97■□□□□ 0.15
SEMA3B-215ENST00000621029 COX8AP10176 69 aa15.96■□□□□ 0.15
SEMA3B-215ENST00000621029 hADV29S1A0JD25 119 aa15.95■□□□□ 0.14
SEMA3B-215ENST00000621029 C9orf92A6NGG3 77 aa15.95■□□□□ 0.14
SEMA3B-215ENST00000621029 LCE2AQ5TA79 106 aaPredicted RBP15.94■□□□□ 0.14
SEMA3B-215ENST00000621029 Q6ZQY7 126 aa15.93■□□□□ 0.14
SEMA3B-215ENST00000621029 KRTAP4-1Q9BYQ7 146 aa15.9■□□□□ 0.14
SEMA3B-215ENST00000621029 Q5XG85 94 aa15.89■□□□□ 0.13
SEMA3B-215ENST00000621029 C14orf144Q96I85 54 aa15.89■□□□□ 0.13
SEMA3B-215ENST00000621029 DLEU1O43261 78 aa15.88■□□□□ 0.13
SEMA3B-215ENST00000621029 BVES-AS1Q5T3Y7 98 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms