RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 CHTF8P0CG12 524 aa4.85□□□□□ -1.63
COLCA1-205ENST00000620864 KCNQ1DNQ9H478 68 aa4.85□□□□□ -1.63
COLCA1-205ENST00000620864 LITAFQ99732 161 aa4.85□□□□□ -1.63
COLCA1-205ENST00000620864 DMAC1Q96GE9 116 aa4.84□□□□□ -1.63
COLCA1-205ENST00000620864 C9orf129Q5T035 196 aaKnown RBP4.84□□□□□ -1.63
COLCA1-205ENST00000620864 Q75L30 129 aa4.83□□□□□ -1.64
COLCA1-205ENST00000620864 FAM104AQ969W3 186 aa4.83□□□□□ -1.64
COLCA1-205ENST00000620864 BAHCC1Q9P281 2608 aa4.83□□□□□ -1.64
COLCA1-205ENST00000620864 COL4A2P08572 1712 aa4.83□□□□□ -1.64
COLCA1-205ENST00000620864 NBDYA0A0U1RRE5 68 aa4.82□□□□□ -1.64
COLCA1-205ENST00000620864 LINC00528Q8N1L1 170 aa4.82□□□□□ -1.64
COLCA1-205ENST00000620864 C10orf142B7Z368 130 aa4.82□□□□□ -1.64
COLCA1-205ENST00000620864 KRTAP21-3Q3LHN1 58 aa4.8□□□□□ -1.64
COLCA1-205ENST00000620864 COL27A1Q8IZC6 1860 aaPredicted RBP4.8□□□□□ -1.64
COLCA1-205ENST00000620864 CSNK1G2-AS1Q8NCQ2 148 aa4.8□□□□□ -1.64
COLCA1-205ENST00000620864 SPTBN4Q9H254 2564 aa4.79□□□□□ -1.64
COLCA1-205ENST00000620864 IGLV1-50A0A075B6I6 118 aa4.79□□□□□ -1.64
COLCA1-205ENST00000620864 PHF5AQ7RTV0 110 aaKnown RBP4.79□□□□□ -1.64
COLCA1-205ENST00000620864 C15orf56Q8N910 161 aa4.79□□□□□ -1.64
COLCA1-205ENST00000620864 USP9YO00507 2555 aaPredicted RBP4.79□□□□□ -1.64
COLCA1-205ENST00000620864 IGFL1Q6UW32 110 aa4.79□□□□□ -1.64
COLCA1-205ENST00000620864 DNAH10OSP0CZ25 163 aa4.78□□□□□ -1.64
COLCA1-205ENST00000620864 Q5XG85 94 aa4.78□□□□□ -1.64
COLCA1-205ENST00000620864 OXTP01178 125 aa4.77□□□□□ -1.65
COLCA1-205ENST00000620864 ASB16-AS1Q495Z4 193 aa4.77□□□□□ -1.65
COLCA1-205ENST00000620864 KRTAP16-1A8MUX0 517 aa4.77□□□□□ -1.65
COLCA1-205ENST00000620864 USP24Q9UPU5 2620 aa4.76□□□□□ -1.65
COLCA1-205ENST00000620864 LCE6AA0A183 80 aa4.76□□□□□ -1.65
COLCA1-205ENST00000620864 KLK9Q2XQG4 91 aa4.76□□□□□ -1.65
COLCA1-205ENST00000620864 SRCAPQ6ZRS2 3230 aa4.76□□□□□ -1.65
COLCA1-205ENST00000620864 K7EIL1 84 aa4.76□□□□□ -1.65
COLCA1-205ENST00000620864 CSAG1Q6PB30 78 aa4.75□□□□□ -1.65
COLCA1-205ENST00000620864 ANKRD11Q6UB99 2663 aaPredicted RBP4.75□□□□□ -1.65
COLCA1-205ENST00000620864 TLX1NBP0CAT3 122 aa4.75□□□□□ -1.65
COLCA1-205ENST00000620864 C9orf92A6NGG3 77 aa4.74□□□□□ -1.65
COLCA1-205ENST00000620864 IGLV7-46A0A075B6I9 117 aa4.74□□□□□ -1.65
COLCA1-205ENST00000620864 OBSCN-AS1Q96MR7 158 aa4.74□□□□□ -1.65
COLCA1-205ENST00000620864 FAM229BQ4G0N7 80 aa4.74□□□□□ -1.65
COLCA1-205ENST00000620864 Q8N377 158 aa4.73□□□□□ -1.65
COLCA1-205ENST00000620864 FLG2Q5D862 2391 aaPredicted RBP4.73□□□□□ -1.65
COLCA1-205ENST00000620864 IGLV5-37A0A075B6J1 123 aa4.73□□□□□ -1.65
COLCA1-205ENST00000620864 LINC00304Q8N9R0 145 aa4.73□□□□□ -1.65
COLCA1-205ENST00000620864 OCR1Q9BZK8 76 aa4.72□□□□□ -1.65
COLCA1-205ENST00000620864 KRTAP10-11P60412 298 aa4.72□□□□□ -1.65
COLCA1-205ENST00000620864 LINC01558Q9Y6Z2 57 aa4.72□□□□□ -1.65
COLCA1-205ENST00000620864 ZNF861PO60384 105 aa4.72□□□□□ -1.65
COLCA1-205ENST00000620864 DSCR10P59022 87 aa4.72□□□□□ -1.65
COLCA1-205ENST00000620864 CAMK2N1Q7Z7J9 78 aa4.72□□□□□ -1.65
COLCA1-205ENST00000620864 A0A1B0GU33 70 aa4.71□□□□□ -1.66
COLCA1-205ENST00000620864 LINC00588Q9Y4M8 146 aa4.71□□□□□ -1.66
COLCA1-205ENST00000620864 FLNBO75369 2602 aaKnown RBP4.71□□□□□ -1.66
COLCA1-205ENST00000620864 ANKRD17O75179 2603 aaKnown RBP4.71□□□□□ -1.66
COLCA1-205ENST00000620864 WDR87Q6ZQQ6 2873 aa4.7□□□□□ -1.66
COLCA1-205ENST00000620864 IGLV5-48A0A075B6I7 105 aa4.7□□□□□ -1.66
COLCA1-205ENST00000620864 Q6ZSA8 131 aa4.7□□□□□ -1.66
COLCA1-205ENST00000620864 PRR34Q9NV39 138 aa4.7□□□□□ -1.66
COLCA1-205ENST00000620864 Q8NAQ8 132 aa4.69□□□□□ -1.66
COLCA1-205ENST00000620864 TNP2Q05952 138 aa4.69□□□□□ -1.66
COLCA1-205ENST00000620864 MGAM2Q2M2H8 2515 aa4.68□□□□□ -1.66
COLCA1-205ENST00000620864 PRR26Q8N8Z3 221 aa4.68□□□□□ -1.66
COLCA1-205ENST00000620864 C9orf163Q8N9P6 203 aa4.68□□□□□ -1.66
COLCA1-205ENST00000620864 GOLGB1Q14789 3259 aaKnown RBP4.68□□□□□ -1.66
COLCA1-205ENST00000620864 A0A0D9SG42 100 aa4.67□□□□□ -1.66
COLCA1-205ENST00000620864 EPG5Q9HCE0 2579 aa4.67□□□□□ -1.66
COLCA1-205ENST00000620864 KRTAP10-3P60369 221 aa4.66□□□□□ -1.66
COLCA1-205ENST00000620864 SPRR4Q96PI1 79 aa4.66□□□□□ -1.66
COLCA1-205ENST00000620864 Q8N9P0 234 aaPredicted RBP4.65□□□□□ -1.66
COLCA1-205ENST00000620864 HRES1P13985 223 aa4.65□□□□□ -1.66
COLCA1-205ENST00000620864 FAM168BA1KXE4 195 aa4.65□□□□□ -1.67
COLCA1-205ENST00000620864 CEP295Q9C0D2 2601 aa4.65□□□□□ -1.67
COLCA1-205ENST00000620864 SEC61BP60468 96 aaKnown RBP4.64□□□□□ -1.67
COLCA1-205ENST00000620864 MAST4O15021 2626 aa4.64□□□□□ -1.67
COLCA1-205ENST00000620864 ATRQ13535 2644 aa4.64□□□□□ -1.67
COLCA1-205ENST00000620864 A0A1W2PNM2 257 aa4.63□□□□□ -1.67
COLCA1-205ENST00000620864 FP248Q71RG6 208 aaPredicted RBP4.62□□□□□ -1.67
COLCA1-205ENST00000620864 CNBPP62633 177 aaKnown RBP4.62□□□□□ -1.67
COLCA1-205ENST00000620864 KRTAP1-3Q8IUG1 177 aa4.62□□□□□ -1.67
COLCA1-205ENST00000620864 IGLV7-43P04211 117 aa4.61□□□□□ -1.67
COLCA1-205ENST00000620864 Q5VV11 94 aa4.6□□□□□ -1.67
COLCA1-205ENST00000620864 CYSTM1Q9H1C7 97 aa4.6□□□□□ -1.67
COLCA1-205ENST00000620864 A0A087WTM6 91 aa4.59□□□□□ -1.67
COLCA1-205ENST00000620864 Q8N1X5 172 aa4.59□□□□□ -1.67
COLCA1-205ENST00000620864 LINC00612Q8N6U2 182 aa4.59□□□□□ -1.67
COLCA1-205ENST00000620864 HECTD1Q9ULT8 2610 aa4.59□□□□□ -1.67
COLCA1-205ENST00000620864 SPINK7P58062 85 aa4.59□□□□□ -1.68
COLCA1-205ENST00000620864 ROMO1P60602 79 aa4.59□□□□□ -1.68
COLCA1-205ENST00000620864 CR1P17927 2039 aa4.58□□□□□ -1.68
COLCA1-205ENST00000620864 KRTAP1-1Q07627 177 aa4.57□□□□□ -1.68
COLCA1-205ENST00000620864 EIF4EBP3O60516 100 aaPredicted RBP4.57□□□□□ -1.68
COLCA1-205ENST00000620864 C19orf73Q9NVV2 129 aa4.57□□□□□ -1.68
COLCA1-205ENST00000620864 A0A096LNT2 108 aa4.57□□□□□ -1.68
COLCA1-205ENST00000620864 ANAPC11Q9NYG5 84 aa4.56□□□□□ -1.68
COLCA1-205ENST00000620864 PLAC4Q8WY50 150 aa4.56□□□□□ -1.68
COLCA1-205ENST00000620864 UTRNP46939 3433 aa4.55□□□□□ -1.68
COLCA1-205ENST00000620864 RPL37P61927 97 aaKnown RBP4.54□□□□□ -1.68
COLCA1-205ENST00000620864 PSORS1C2Q9UIG4 136 aa4.53□□□□□ -1.68
COLCA1-205ENST00000620864 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.53□□□□□ -1.68
COLCA1-205ENST00000620864 SETXQ7Z333 2677 aaKnown RBP4.52□□□□□ -1.69
COLCA1-205ENST00000620864 S4R3F8 94 aa4.52□□□□□ -1.69
COLCA1-205ENST00000620864 ZCCHC13Q8WW36 166 aaKnown RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms