RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 MIR22HGQ0VDD5 57 aa3.38□□□□□ -1.87
VPS13D-214ENST00000620676 LINC00167Q96N53 147 aa3.38□□□□□ -1.87
VPS13D-214ENST00000620676 MUC22E2RYF6 1773 aaPredicted RBP3.38□□□□□ -1.87
VPS13D-214ENST00000620676 CYP4F30PQ9H0H9 118 aa3.38□□□□□ -1.87
VPS13D-214ENST00000620676 C16orf90A8MZG2 172 aa3.38□□□□□ -1.87
VPS13D-214ENST00000620676 CSAG1Q6PB30 78 aa3.37□□□□□ -1.87
VPS13D-214ENST00000620676 KLK9Q2XQG4 91 aa3.37□□□□□ -1.87
VPS13D-214ENST00000620676 NSD1Q96L73 2696 aaPredicted RBP3.37□□□□□ -1.87
VPS13D-214ENST00000620676 ACYP2P14621 99 aa3.37□□□□□ -1.87
VPS13D-214ENST00000620676 A0A1W2PPR1 153 aa3.37□□□□□ -1.87
VPS13D-214ENST00000620676 SPINK7P58062 85 aa3.37□□□□□ -1.87
VPS13D-214ENST00000620676 DEFB113Q30KQ7 82 aa3.37□□□□□ -1.87
VPS13D-214ENST00000620676 LINC00588Q9Y4M8 146 aa3.37□□□□□ -1.87
VPS13D-214ENST00000620676 LY6G6DO95868 133 aa3.36□□□□□ -1.87
VPS13D-214ENST00000620676 PLA2G1BP04054 148 aaKnown RBP3.36□□□□□ -1.87
VPS13D-214ENST00000620676 C16orf95Q9H693 158 aa3.36□□□□□ -1.87
VPS13D-214ENST00000620676 OCR1Q9BZK8 76 aa3.36□□□□□ -1.87
VPS13D-214ENST00000620676 LINC01556Q5JQF7 62 aa3.36□□□□□ -1.87
VPS13D-214ENST00000620676 EPM2AB3EWF7 344 aa3.35□□□□□ -1.87
VPS13D-214ENST00000620676 Q5VV11 94 aa3.35□□□□□ -1.87
VPS13D-214ENST00000620676 C1orf134Q5TEV5 83 aa3.35□□□□□ -1.87
VPS13D-214ENST00000620676 PRR26Q8N8Z3 221 aa3.35□□□□□ -1.87
VPS13D-214ENST00000620676 A0A0D9SG42 100 aa3.35□□□□□ -1.87
VPS13D-214ENST00000620676 FAM104AQ969W3 186 aa3.35□□□□□ -1.87
VPS13D-214ENST00000620676 A0A1B0GUV1 79 aa3.35□□□□□ -1.87
VPS13D-214ENST00000620676 Q8NBF4 154 aa3.35□□□□□ -1.87
VPS13D-214ENST00000620676 CDC42SE1Q9NRR8 79 aa3.35□□□□□ -1.87
VPS13D-214ENST00000620676 STAB2Q8WWQ8 2551 aa3.34□□□□□ -1.87
VPS13D-214ENST00000620676 ANAPC11Q9NYG5 84 aa3.34□□□□□ -1.87
VPS13D-214ENST00000620676 TEP1Q99973 2627 aaKnown RBP3.34□□□□□ -1.87
VPS13D-214ENST00000620676 Q6ZRX8 168 aa3.34□□□□□ -1.88
VPS13D-214ENST00000620676 J3QKU1 62 aa3.33□□□□□ -1.88
VPS13D-214ENST00000620676 LINC01554Q52M75 96 aa3.33□□□□□ -1.88
VPS13D-214ENST00000620676 ADM2Q7Z4H4 148 aa3.33□□□□□ -1.88
VPS13D-214ENST00000620676 Q8NAQ8 132 aa3.33□□□□□ -1.88
VPS13D-214ENST00000620676 Q8N377 158 aa3.33□□□□□ -1.88
VPS13D-214ENST00000620676 SMR3AQ99954 134 aa3.33□□□□□ -1.88
VPS13D-214ENST00000620676 A0A1W2PNM2 257 aa3.32□□□□□ -1.88
VPS13D-214ENST00000620676 INAFM1C9JVW0 142 aa3.32□□□□□ -1.88
VPS13D-214ENST00000620676 A0A096LNT2 108 aa3.31□□□□□ -1.88
VPS13D-214ENST00000620676 KRTAP10-9P60411 292 aa3.31□□□□□ -1.88
VPS13D-214ENST00000620676 PHF5AQ7RTV0 110 aaKnown RBP3.31□□□□□ -1.88
VPS13D-214ENST00000620676 A8MWP4 228 aa3.31□□□□□ -1.88
VPS13D-214ENST00000620676 Q75L30 129 aa3.31□□□□□ -1.88
VPS13D-214ENST00000620676 Q8NDZ9 215 aa3.31□□□□□ -1.88
VPS13D-214ENST00000620676 APLNQ9ULZ1 77 aa3.31□□□□□ -1.88
VPS13D-214ENST00000620676 BPTFQ12830 3046 aa3.31□□□□□ -1.88
VPS13D-214ENST00000620676 IGFL1Q6UW32 110 aa3.31□□□□□ -1.88
VPS13D-214ENST00000620676 Q8N9P0 234 aaPredicted RBP3.3□□□□□ -1.88
VPS13D-214ENST00000620676 Q8N1X5 172 aa3.3□□□□□ -1.88
VPS13D-214ENST00000620676 FLNCQ14315 2725 aa3.3□□□□□ -1.88
VPS13D-214ENST00000620676 DSCR10P59022 87 aa3.3□□□□□ -1.88
VPS13D-214ENST00000620676 SPACA4Q8TDM5 124 aa3.29□□□□□ -1.88
VPS13D-214ENST00000620676 FLNAP21333 2647 aaKnown RBP3.29□□□□□ -1.88
VPS13D-214ENST00000620676 TP53AIP1Q9HCN2 124 aa3.29□□□□□ -1.88
VPS13D-214ENST00000620676 RTL8CO15255 209 aa3.28□□□□□ -1.88
VPS13D-214ENST00000620676 C9orf163Q8N9P6 203 aa3.28□□□□□ -1.88
VPS13D-214ENST00000620676 UQCR11O14957 56 aa3.28□□□□□ -1.88
VPS13D-214ENST00000620676 C15orf56Q8N910 161 aa3.28□□□□□ -1.88
VPS13D-214ENST00000620676 LINC00528Q8N1L1 170 aa3.28□□□□□ -1.89
VPS13D-214ENST00000620676 UBR5O95071 2799 aaPredicted RBP3.27□□□□□ -1.89
VPS13D-214ENST00000620676 CASC10Q5T4H9 136 aa3.27□□□□□ -1.89
VPS13D-214ENST00000620676 UTRNP46939 3433 aa3.27□□□□□ -1.89
VPS13D-214ENST00000620676 NBEAQ8NFP9 2946 aa3.26□□□□□ -1.89
VPS13D-214ENST00000620676 C8orf17Q9NRJ1 99 aa3.26□□□□□ -1.89
VPS13D-214ENST00000620676 GIG44P09565 113 aaPredicted RBP3.26□□□□□ -1.89
VPS13D-214ENST00000620676 H3BPC8 53 aa3.26□□□□□ -1.89
VPS13D-214ENST00000620676 LINC00612Q8N6U2 182 aa3.26□□□□□ -1.89
VPS13D-214ENST00000620676 TEX15Q9BXT5 2789 aa3.26□□□□□ -1.89
VPS13D-214ENST00000620676 H3BNG1 76 aa3.26□□□□□ -1.89
VPS13D-214ENST00000620676 DNAH12Q6ZR08 3092 aa3.25□□□□□ -1.89
VPS13D-214ENST00000620676 COL27A1Q8IZC6 1860 aaPredicted RBP3.25□□□□□ -1.89
VPS13D-214ENST00000620676 HRES1P13985 223 aa3.25□□□□□ -1.89
VPS13D-214ENST00000620676 CHD7Q9P2D1 2997 aa3.25□□□□□ -1.89
VPS13D-214ENST00000620676 KCNQ1DNQ9H478 68 aa3.25□□□□□ -1.89
VPS13D-214ENST00000620676 Q96NJ1 140 aa3.25□□□□□ -1.89
VPS13D-214ENST00000620676 CR1P17927 2039 aa3.24□□□□□ -1.89
VPS13D-214ENST00000620676 IGLV1-50A0A075B6I6 118 aa3.24□□□□□ -1.89
VPS13D-214ENST00000620676 GOLGB1Q14789 3259 aaKnown RBP3.23□□□□□ -1.89
VPS13D-214ENST00000620676 DNAH10OSP0CZ25 163 aa3.23□□□□□ -1.89
VPS13D-214ENST00000620676 A6NN06 94 aa3.23□□□□□ -1.89
VPS13D-214ENST00000620676 K7EIL1 84 aa3.23□□□□□ -1.89
VPS13D-214ENST00000620676 SPANXA2-OT1Q8N9U9 137 aa3.22□□□□□ -1.89
VPS13D-214ENST00000620676 IGSF10Q6WRI0 2623 aa3.22□□□□□ -1.89
VPS13D-214ENST00000620676 MRPL34Q9BQ48 92 aaKnown RBP3.22□□□□□ -1.89
VPS13D-214ENST00000620676 CNBPP62633 177 aaKnown RBP3.22□□□□□ -1.89
VPS13D-214ENST00000620676 CHD9Q3L8U1 2897 aa3.21□□□□□ -1.9
VPS13D-214ENST00000620676 A0A1B0GVX0 72 aa3.21□□□□□ -1.9
VPS13D-214ENST00000620676 COL4A2P08572 1712 aa3.21□□□□□ -1.9
VPS13D-214ENST00000620676 C9orf92A6NGG3 77 aa3.21□□□□□ -1.9
VPS13D-214ENST00000620676 GVQW2A0A096LPI5 108 aaPredicted RBP3.21□□□□□ -1.9
VPS13D-214ENST00000620676 LINC01558Q9Y6Z2 57 aa3.21□□□□□ -1.9
VPS13D-214ENST00000620676 ITPR2Q14571 2701 aa3.21□□□□□ -1.9
VPS13D-214ENST00000620676 CFAP54Q96N23 3096 aa3.2□□□□□ -1.9
VPS13D-214ENST00000620676 IGLV7-46A0A075B6I9 117 aa3.2□□□□□ -1.9
VPS13D-214ENST00000620676 IGLV5-52A0A0A0MRZ9 124 aa3.2□□□□□ -1.9
VPS13D-214ENST00000620676 LY6G6CO95867 125 aa3.2□□□□□ -1.9
VPS13D-214ENST00000620676 NIPBLQ6KC79 2804 aaeCLIP3.19□□□□□ -1.94e-6■■□□□ 13.9
VPS13D-214ENST00000620676 IGLV5-48A0A075B6I7 105 aa3.19□□□□□ -1.9
VPS13D-214ENST00000620676 CSNK1G2-AS1Q8NCQ2 148 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms