RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 SPAG11AQ6PDA7 123 aa9.82□□□□□ -0.84
HMGN3-203ENST00000620514 Q8NBF4 154 aa9.82□□□□□ -0.84
HMGN3-203ENST00000620514 IGLV6-57P01721 117 aa9.81□□□□□ -0.84
HMGN3-203ENST00000620514 S100A7L2Q5SY68 101 aa9.81□□□□□ -0.84
HMGN3-203ENST00000620514 Q9BRP9 147 aa9.81□□□□□ -0.84
HMGN3-203ENST00000620514 TPRXLQ17RH7 258 aa9.79□□□□□ -0.84
HMGN3-203ENST00000620514 Q6ZRX8 168 aa9.79□□□□□ -0.84
HMGN3-203ENST00000620514 LCE2CQ5TA81 110 aa9.78□□□□□ -0.84
HMGN3-203ENST00000620514 LINC01545Q5VT33 79 aa9.78□□□□□ -0.84
HMGN3-203ENST00000620514 TRAV23DV6A0A075B6W5 121 aa9.77□□□□□ -0.85
HMGN3-203ENST00000620514 LITAFQ99732 161 aa9.77□□□□□ -0.85
HMGN3-203ENST00000620514 CDIP1Q9H305 208 aa9.77□□□□□ -0.85
HMGN3-203ENST00000620514 MUC17Q685J3 4493 aa9.77□□□□□ -0.85
HMGN3-203ENST00000620514 IGLV9-49A0A0B4J1Y8 123 aa9.76□□□□□ -0.85
HMGN3-203ENST00000620514 PET117Q6UWS5 81 aa9.76□□□□□ -0.85
HMGN3-203ENST00000620514 MOBPQ13875 183 aa9.75□□□□□ -0.85
HMGN3-203ENST00000620514 TTTY13Q9BZ97 58 aa9.75□□□□□ -0.85
HMGN3-203ENST00000620514 ZNF73O43830 326 aaPredicted RBP9.74□□□□□ -0.85
HMGN3-203ENST00000620514 C3orf79P0CE67 100 aa9.74□□□□□ -0.85
HMGN3-203ENST00000620514 LINC00308Q8TCZ7 52 aa9.74□□□□□ -0.85
HMGN3-203ENST00000620514 A6NJY4 79 aa9.73□□□□□ -0.85
HMGN3-203ENST00000620514 ZNF815PA8K554 130 aa9.72□□□□□ -0.85
HMGN3-203ENST00000620514 TIMM17BO60830 172 aa9.72□□□□□ -0.85
HMGN3-203ENST00000620514 SPINK1P00995 79 aa9.72□□□□□ -0.85
HMGN3-203ENST00000620514 JOSD1Q15040 202 aaPredicted RBP9.71□□□□□ -0.86
HMGN3-203ENST00000620514 FP248Q71RG6 208 aaPredicted RBP9.71□□□□□ -0.86
HMGN3-203ENST00000620514 ST20-AS1Q8NBB2 130 aa9.71□□□□□ -0.86
HMGN3-203ENST00000620514 SPANXCQ9NY87 97 aa9.71□□□□□ -0.86
HMGN3-203ENST00000620514 KRTDAPP60985 99 aa9.7□□□□□ -0.86
HMGN3-203ENST00000620514 COA6Q5JTJ3 125 aaKnown RBP9.7□□□□□ -0.86
HMGN3-203ENST00000620514 SSBP3-AS1Q7Z2R9 100 aa9.7□□□□□ -0.86
HMGN3-203ENST00000620514 OR13C6PQ8NH95 151 aa9.7□□□□□ -0.86
HMGN3-203ENST00000620514 FAT4Q6V0I7 4981 aa9.67□□□□□ -0.86
HMGN3-203ENST00000620514 A0A0U1RQV1 116 aa9.67□□□□□ -0.86
HMGN3-203ENST00000620514 HINT1P49773 126 aaPredicted RBP9.66□□□□□ -0.86
HMGN3-203ENST00000620514 KRTAP13-3Q3SY46 172 aa9.66□□□□□ -0.86
HMGN3-203ENST00000620514 C9orf153Q5TBE3 101 aa9.66□□□□□ -0.86
HMGN3-203ENST00000620514 ANKRD39Q53RE8 183 aa9.65□□□□□ -0.86
HMGN3-203ENST00000620514 Q8N377 158 aa9.65□□□□□ -0.86
HMGN3-203ENST00000620514 CBY1Q9Y3M2 126 aa9.65□□□□□ -0.86
HMGN3-203ENST00000620514 SPANXDQ9BXN6 97 aa9.64□□□□□ -0.87
HMGN3-203ENST00000620514 RPS29P62273 56 aaKnown RBP9.63□□□□□ -0.87
HMGN3-203ENST00000620514 ATOH7Q8N100 152 aa9.63□□□□□ -0.87
HMGN3-203ENST00000620514 C5orf52A6NGY3 159 aa9.62□□□□□ -0.87
HMGN3-203ENST00000620514 C20orf202A1L168 122 aa9.61□□□□□ -0.87
HMGN3-203ENST00000620514 SCGB1D4Q6XE38 83 aa9.61□□□□□ -0.87
HMGN3-203ENST00000620514 LINC00518Q8N0U6 118 aa9.61□□□□□ -0.87
HMGN3-203ENST00000620514 SLC25A20O43772 301 aa9.6□□□□□ -0.87
HMGN3-203ENST00000620514 SPRR1BP22528 89 aa9.6□□□□□ -0.87
HMGN3-203ENST00000620514 C6orf99Q4VX62 202 aa9.6□□□□□ -0.87
HMGN3-203ENST00000620514 DHRS4-AS1Q9P1J3 65 aa9.6□□□□□ -0.87
HMGN3-203ENST00000620514 COX7BP24311 80 aa9.59□□□□□ -0.87
HMGN3-203ENST00000620514 ELOF1P60002 83 aaKnown RBP9.59□□□□□ -0.87
HMGN3-203ENST00000620514 PCP2Q8IVA1 136 aa9.58□□□□□ -0.88
HMGN3-203ENST00000620514 LORP23490 312 aaPredicted RBP9.56□□□□□ -0.88
HMGN3-203ENST00000620514 IFITM1P13164 125 aa9.55□□□□□ -0.88
HMGN3-203ENST00000620514 MUSTN1Q8IVN3 82 aa9.55□□□□□ -0.88
HMGN3-203ENST00000620514 ASB16-AS1Q495Z4 193 aa9.54□□□□□ -0.88
HMGN3-203ENST00000620514 HRCT1Q6UXD1 115 aa9.54□□□□□ -0.88
HMGN3-203ENST00000620514 A6NDN8 102 aa9.53□□□□□ -0.88
HMGN3-203ENST00000620514 SLC25A34Q6PIV7 304 aa9.53□□□□□ -0.88
HMGN3-203ENST00000620514 DEFB105AQ8NG35 78 aa9.53□□□□□ -0.88
HMGN3-203ENST00000620514 LAMTOR3Q9UHA4 124 aa9.53□□□□□ -0.88
HMGN3-203ENST00000620514 TAL2Q16559 108 aa9.52□□□□□ -0.89
HMGN3-203ENST00000620514 Q1RN00 199 aa9.52□□□□□ -0.89
HMGN3-203ENST00000620514 Q6ZVH6 145 aa9.52□□□□□ -0.89
HMGN3-203ENST00000620514 COPS9Q8WXC6 57 aa9.52□□□□□ -0.89
HMGN3-203ENST00000620514 KRTAP4-1Q9BYQ7 146 aa9.51□□□□□ -0.89
HMGN3-203ENST00000620514 TRBV7-6A0A0J9YX20 115 aa9.5□□□□□ -0.89
HMGN3-203ENST00000620514 HIST3H2BBQ8N257 126 aa9.5□□□□□ -0.89
HMGN3-203ENST00000620514 A0A1B0GWB2 263 aa9.49□□□□□ -0.89
HMGN3-203ENST00000620514 AKR1D1P51857 326 aa9.49□□□□□ -0.89
HMGN3-203ENST00000620514 TEX49A0A1B0GTD5 131 aa9.48□□□□□ -0.89
HMGN3-203ENST00000620514 SEC61BP60468 96 aaKnown RBP9.48□□□□□ -0.89
HMGN3-203ENST00000620514 SMIM29Q86T20 159 aa9.48□□□□□ -0.89
HMGN3-203ENST00000620514 HIST1H2BLQ99880 126 aa9.48□□□□□ -0.89
HMGN3-203ENST00000620514 LINC01547P58512 204 aaPredicted RBP9.47□□□□□ -0.89
HMGN3-203ENST00000620514 SNRPEP62304 92 aaKnown RBP9.47□□□□□ -0.89
HMGN3-203ENST00000620514 XP32Q5T750 250 aa9.47□□□□□ -0.89
HMGN3-203ENST00000620514 LIMD2Q9BT23 127 aa9.47□□□□□ -0.89
HMGN3-203ENST00000620514 SMIM11BQ8TCY0 68 aa9.46□□□□□ -0.9
HMGN3-203ENST00000620514 IGLV5-48A0A075B6I7 105 aa9.44□□□□□ -0.9
HMGN3-203ENST00000620514 TRAV13-2A0A0B4J235 113 aa9.44□□□□□ -0.9
HMGN3-203ENST00000620514 A0A0G2JQZ4 141 aa9.44□□□□□ -0.9
HMGN3-203ENST00000620514 S100A2P29034 98 aa9.44□□□□□ -0.9
HMGN3-203ENST00000620514 PRO1933Q9H354 126 aa9.44□□□□□ -0.9
HMGN3-203ENST00000620514 H7C2G1 150 aa9.42□□□□□ -0.9
HMGN3-203ENST00000620514 CD164Q04900 197 aa9.42□□□□□ -0.9
HMGN3-203ENST00000620514 A4D1N5 150 aa9.41□□□□□ -0.9
HMGN3-203ENST00000620514 HSBP1L1C9JCN9 74 aa9.4□□□□□ -0.9
HMGN3-203ENST00000620514 C9orf92A6NGG3 77 aa9.39□□□□□ -0.91
HMGN3-203ENST00000620514 KRTAP9-2Q9BYQ4 174 aa9.39□□□□□ -0.91
HMGN3-203ENST00000620514 S100A1P23297 94 aa9.38□□□□□ -0.91
HMGN3-203ENST00000620514 NHP2Q9NX24 153 aaKnown RBP9.38□□□□□ -0.91
HMGN3-203ENST00000620514 S100A6P06703 90 aa9.37□□□□□ -0.91
HMGN3-203ENST00000620514 Q5XG85 94 aa9.35□□□□□ -0.91
HMGN3-203ENST00000620514 LINC00575Q6W349 94 aa9.35□□□□□ -0.91
HMGN3-203ENST00000620514 VAMP3Q15836 100 aa9.34□□□□□ -0.91
HMGN3-203ENST00000620514 C1orf195Q5TG92 126 aa9.34□□□□□ -0.91
HMGN3-203ENST00000620514 SCGB1D1O95968 90 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms