RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 NKAPP1Q8N9T2 125 aa4.4□□□□□ -1.71
CBWD1-228ENST00000619157 ANAPC11Q9NYG5 84 aa4.4□□□□□ -1.71
CBWD1-228ENST00000619157 NDUFA12Q9UI09 145 aa4.4□□□□□ -1.71
CBWD1-228ENST00000619157 LEPROTO15243 131 aa4.39□□□□□ -1.71
CBWD1-228ENST00000619157 DPM2O94777 84 aa4.39□□□□□ -1.71
CBWD1-228ENST00000619157 LINC00158P58513 81 aa4.39□□□□□ -1.71
CBWD1-228ENST00000619157 PRLHP81277 87 aa4.39□□□□□ -1.71
CBWD1-228ENST00000619157 SFTA2Q6UW10 78 aa4.39□□□□□ -1.71
CBWD1-228ENST00000619157 DAND5Q8N907 189 aa4.39□□□□□ -1.71
CBWD1-228ENST00000619157 TMEM126AQ9H061 195 aa4.39□□□□□ -1.71
CBWD1-228ENST00000619157 HSPB8Q9UJY1 196 aa4.39□□□□□ -1.71
CBWD1-228ENST00000619157 SYS1-DBNDD2H3BUS1 97 aa4.38□□□□□ -1.71
CBWD1-228ENST00000619157 IGKCP01834 107 aa4.38□□□□□ -1.71
CBWD1-228ENST00000619157 PLNP26678 52 aa4.38□□□□□ -1.71
CBWD1-228ENST00000619157 RPL28P46779 137 aaKnown RBP4.38□□□□□ -1.71
CBWD1-228ENST00000619157 KRTAP13-2Q52LG2 175 aa4.38□□□□□ -1.71
CBWD1-228ENST00000619157 COA6Q5JTJ3 125 aaKnown RBP4.38□□□□□ -1.71
CBWD1-228ENST00000619157 LOC107984156A0A0G2JMH3 177 aa4.37□□□□□ -1.71
CBWD1-228ENST00000619157 J3QQQ9 107 aa4.37□□□□□ -1.71
CBWD1-228ENST00000619157 HERV-K104P63124 156 aa4.37□□□□□ -1.71
CBWD1-228ENST00000619157 RPL24P83731 157 aaKnown RBP4.37□□□□□ -1.71
CBWD1-228ENST00000619157 KRTAP13-3Q3SY46 172 aa4.37□□□□□ -1.71
CBWD1-228ENST00000619157 MEIG1Q5JSS6 88 aa4.37□□□□□ -1.71
CBWD1-228ENST00000619157 ADAMTSL4-AS1Q5T5F5 129 aa4.37□□□□□ -1.71
CBWD1-228ENST00000619157 LINC01545Q5VT33 79 aa4.37□□□□□ -1.71
CBWD1-228ENST00000619157 SOSTDC1Q6X4U4 206 aa4.37□□□□□ -1.71
CBWD1-228ENST00000619157 ARL17AQ8IVW1 177 aa4.37□□□□□ -1.71
CBWD1-228ENST00000619157 BOD1L2Q8IYS8 172 aa4.37□□□□□ -1.71
CBWD1-228ENST00000619157 MAP1LC3CQ9BXW4 147 aa4.37□□□□□ -1.71
CBWD1-228ENST00000619157 IGKV2D-26A0A0A0MRZ7 120 aa4.36□□□□□ -1.71
CBWD1-228ENST00000619157 MYMXA0A1B0GTQ4 84 aa4.36□□□□□ -1.71
CBWD1-228ENST00000619157 KRTAP4-16G5E9R7 235 aaPredicted RBP4.36□□□□□ -1.71
CBWD1-228ENST00000619157 NCR3O14931 201 aa4.36□□□□□ -1.71
CBWD1-228ENST00000619157 C3orf79P0CE67 100 aa4.36□□□□□ -1.71
CBWD1-228ENST00000619157 PLEKHB2Q96CS7 222 aa4.36□□□□□ -1.71
CBWD1-228ENST00000619157 LITAFQ99732 161 aa4.36□□□□□ -1.71
CBWD1-228ENST00000619157 PAM16Q9Y3D7 125 aa4.36□□□□□ -1.71
CBWD1-228ENST00000619157 A0A0J9YXY3 114 aa4.35□□□□□ -1.71
CBWD1-228ENST00000619157 E9PLD3 99 aa4.35□□□□□ -1.71
CBWD1-228ENST00000619157 SPRR1AP35321 89 aa4.35□□□□□ -1.71
CBWD1-228ENST00000619157 UBE2AP49459 152 aa4.35□□□□□ -1.71
CBWD1-228ENST00000619157 FAM19A1Q7Z5A9 133 aa4.35□□□□□ -1.71
CBWD1-228ENST00000619157 TTTY13Q9BZ97 58 aa4.35□□□□□ -1.71
CBWD1-228ENST00000619157 TRBV10-3A0A0K0K1G6 114 aa4.34□□□□□ -1.71
CBWD1-228ENST00000619157 NMUP48645 174 aa4.34□□□□□ -1.71
CBWD1-228ENST00000619157 PET117Q6UWS5 81 aa4.34□□□□□ -1.71
CBWD1-228ENST00000619157 KCNQ1DNQ9H478 68 aa4.34□□□□□ -1.71
CBWD1-228ENST00000619157 MUC17Q685J3 4493 aa4.33□□□□□ -1.72
CBWD1-228ENST00000619157 LGALS3P17931 250 aaKnown RBP4.33□□□□□ -1.72
CBWD1-228ENST00000619157 RPL13AP40429 203 aaKnown RBP4.33□□□□□ -1.72
CBWD1-228ENST00000619157 PCP4P48539 62 aa4.33□□□□□ -1.72
CBWD1-228ENST00000619157 HERVK_113P61574 105 aa4.33□□□□□ -1.72
CBWD1-228ENST00000619157 NPC2P61916 151 aa4.33□□□□□ -1.72
CBWD1-228ENST00000619157 ATP6V1G1O75348 118 aa4.32□□□□□ -1.72
CBWD1-228ENST00000619157 CRYGAP11844 174 aa4.32□□□□□ -1.72
CBWD1-228ENST00000619157 KRTAP12-2P59991 146 aa4.32□□□□□ -1.72
CBWD1-228ENST00000619157 C3orf22Q8N5N4 141 aa4.32□□□□□ -1.72
CBWD1-228ENST00000619157 SMCR5Q8TEV8 140 aa4.32□□□□□ -1.72
CBWD1-228ENST00000619157 MUC2Q02817 5179 aa4.32□□□□□ -1.72
CBWD1-228ENST00000619157 LINC00587B1AMM8 73 aa4.31□□□□□ -1.72
CBWD1-228ENST00000619157 ERC2-IT1O76042 136 aa4.31□□□□□ -1.72
CBWD1-228ENST00000619157 IGLV6-57P01721 117 aa4.31□□□□□ -1.72
CBWD1-228ENST00000619157 KRTDAPP60985 99 aa4.31□□□□□ -1.72
CBWD1-228ENST00000619157 FAM229BQ4G0N7 80 aa4.31□□□□□ -1.72
CBWD1-228ENST00000619157 LINC00337Q8N6G1 96 aa4.31□□□□□ -1.72
CBWD1-228ENST00000619157 SPRR4Q96PI1 79 aa4.31□□□□□ -1.72
CBWD1-228ENST00000619157 HIGD2AQ9BW72 106 aa4.31□□□□□ -1.72
CBWD1-228ENST00000619157 TRBV10-2A0A0K0K1G8 114 aa4.3□□□□□ -1.72
CBWD1-228ENST00000619157 NDUFC2O95298 119 aa4.3□□□□□ -1.72
CBWD1-228ENST00000619157 TSPAN13O95857 204 aa4.3□□□□□ -1.72
CBWD1-228ENST00000619157 DDTP30046 118 aa4.3□□□□□ -1.72
CBWD1-228ENST00000619157 DSCR10P59022 87 aa4.3□□□□□ -1.72
CBWD1-228ENST00000619157 ATOH7Q8N100 152 aa4.3□□□□□ -1.72
CBWD1-228ENST00000619157 HIST3H2BBQ8N257 126 aa4.3□□□□□ -1.72
CBWD1-228ENST00000619157 TYMSOSQ8TAI1 123 aa4.3□□□□□ -1.72
CBWD1-228ENST00000619157 LINC00308Q8TCZ7 52 aa4.3□□□□□ -1.72
CBWD1-228ENST00000619157 Q9BRP9 147 aa4.3□□□□□ -1.72
CBWD1-228ENST00000619157 SPANXB1Q9NS25 103 aaPredicted RBP4.3□□□□□ -1.72
CBWD1-228ENST00000619157 ZNF815PA8K554 130 aa4.29□□□□□ -1.72
CBWD1-228ENST00000619157 HIST1H2BLQ99880 126 aa4.29□□□□□ -1.72
CBWD1-228ENST00000619157 TIMM17BO60830 172 aa4.28□□□□□ -1.72
CBWD1-228ENST00000619157 S100A1P23297 94 aa4.28□□□□□ -1.72
CBWD1-228ENST00000619157 PCP2Q8IVA1 136 aa4.28□□□□□ -1.72
CBWD1-228ENST00000619157 ETDCA0A1B0GVM5 59 aa4.27□□□□□ -1.73
CBWD1-228ENST00000619157 LINC00483Q53H64 154 aa4.27□□□□□ -1.73
CBWD1-228ENST00000619157 LINC00304Q8N9R0 145 aa4.27□□□□□ -1.73
CBWD1-228ENST00000619157 MIEN1Q9BRT3 115 aa4.27□□□□□ -1.73
CBWD1-228ENST00000619157 PPDPFQ9H3Y8 114 aa4.27□□□□□ -1.73
CBWD1-228ENST00000619157 TRAV23DV6A0A075B6W5 121 aa4.26□□□□□ -1.73
CBWD1-228ENST00000619157 PRR4Q16378 134 aa4.26□□□□□ -1.73
CBWD1-228ENST00000619157 Q6ZRX8 168 aa4.26□□□□□ -1.73
CBWD1-228ENST00000619157 RETNLBQ9BQ08 111 aa4.26□□□□□ -1.73
CBWD1-228ENST00000619157 SPANXCQ9NY87 97 aa4.26□□□□□ -1.73
CBWD1-228ENST00000619157 ZNF73O43830 326 aaPredicted RBP4.25□□□□□ -1.73
CBWD1-228ENST00000619157 S100A7L2Q5SY68 101 aa4.25□□□□□ -1.73
CBWD1-228ENST00000619157 ST20-AS1Q8NBB2 130 aa4.25□□□□□ -1.73
CBWD1-228ENST00000619157 SPANXDQ9BXN6 97 aa4.25□□□□□ -1.73
CBWD1-228ENST00000619157 C20orf202A1L168 122 aa4.24□□□□□ -1.73
CBWD1-228ENST00000619157 GAGE2AQ6NT46 116 aa4.24□□□□□ -1.73
CBWD1-228ENST00000619157 C5orf52A6NGY3 159 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms