RNA–Protein interactions for RNA: ENST00000619138.4

CNTNAP3B-215, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 3,840 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-215ENST00000619138 IGKV2D-24A0A075B6R9 120 aa9.29□□□□□ -0.92
CNTNAP3B-215ENST00000619138 WFDC10BQ8IUB3 73 aa9.29□□□□□ -0.92
CNTNAP3B-215ENST00000619138 WIPF1O43516 503 aa9.28□□□□□ -0.92
CNTNAP3B-215ENST00000619138 KIAA0087Q14695 138 aa9.28□□□□□ -0.92
CNTNAP3B-215ENST00000619138 UBE2BP63146 152 aa9.27□□□□□ -0.92
CNTNAP3B-215ENST00000619138 ZNF73O43830 326 aaPredicted RBP9.27□□□□□ -0.93
CNTNAP3B-215ENST00000619138 FAM229BQ4G0N7 80 aa9.27□□□□□ -0.93
CNTNAP3B-215ENST00000619138 PMAIP1Q13794 54 aa9.26□□□□□ -0.93
CNTNAP3B-215ENST00000619138 RPL37AP8A6NKH3 93 aa9.26□□□□□ -0.93
CNTNAP3B-215ENST00000619138 C19orf73Q9NVV2 129 aa9.26□□□□□ -0.93
CNTNAP3B-215ENST00000619138 KLKP1Q107X0 134 aa9.24□□□□□ -0.93
CNTNAP3B-215ENST00000619138 PRYO14603 147 aa9.23□□□□□ -0.93
CNTNAP3B-215ENST00000619138 LINC00167Q96N53 147 aa9.23□□□□□ -0.93
CNTNAP3B-215ENST00000619138 CHKB-CPT1BH3BT56 60 aa9.22□□□□□ -0.93
CNTNAP3B-215ENST00000619138 COX17Q14061 63 aa9.22□□□□□ -0.93
CNTNAP3B-215ENST00000619138 IGHV4-30-4P0DP06 118 aa9.21□□□□□ -0.93
CNTNAP3B-215ENST00000619138 FBN1P35555 2871 aaKnown RBP9.21□□□□□ -0.93
CNTNAP3B-215ENST00000619138 A0A1B0GUV1 79 aa9.21□□□□□ -0.94
CNTNAP3B-215ENST00000619138 APOC4P55056 127 aa9.21□□□□□ -0.94
CNTNAP3B-215ENST00000619138 CSNK1G2-AS1Q8NCQ2 148 aa9.21□□□□□ -0.94
CNTNAP3B-215ENST00000619138 TRRAPQ9Y4A5 3859 aa9.2□□□□□ -0.94
CNTNAP3B-215ENST00000619138 ESRGQ1W209 222 aa9.2□□□□□ -0.94
CNTNAP3B-215ENST00000619138 ETDCA0A1B0GVM5 59 aa9.2□□□□□ -0.94
CNTNAP3B-215ENST00000619138 LOC110117498A0A087WWA1 95 aa9.19□□□□□ -0.94
CNTNAP3B-215ENST00000619138 PDE6GP18545 87 aa9.19□□□□□ -0.94
CNTNAP3B-215ENST00000619138 UBE2DNLQ8IWF7 75 aa9.19□□□□□ -0.94
CNTNAP3B-215ENST00000619138 C6orf48Q9UBA6 75 aa9.19□□□□□ -0.94
CNTNAP3B-215ENST00000619138 CXCL6P80162 114 aa9.19□□□□□ -0.94
CNTNAP3B-215ENST00000619138 PSCAO43653 123 aa9.18□□□□□ -0.94
CNTNAP3B-215ENST00000619138 STAB2Q8WWQ8 2551 aa9.18□□□□□ -0.94
CNTNAP3B-215ENST00000619138 SMIM29Q86T20 159 aa9.18□□□□□ -0.94
CNTNAP3B-215ENST00000619138 NDUFS5O43920 106 aa9.17□□□□□ -0.94
CNTNAP3B-215ENST00000619138 MRPL55Q7Z7F7 128 aaKnown RBP9.17□□□□□ -0.94
CNTNAP3B-215ENST00000619138 NDUFC1O43677 76 aa9.17□□□□□ -0.94
CNTNAP3B-215ENST00000619138 SPART-AS1P0CW21 52 aa9.16□□□□□ -0.94
CNTNAP3B-215ENST00000619138 TRBV7-4A0A0J9YYF1 115 aa9.15□□□□□ -0.94
CNTNAP3B-215ENST00000619138 LINC00208Q96KT6 92 aa9.15□□□□□ -0.94
CNTNAP3B-215ENST00000619138 A0A0G2JQZ4 141 aa9.15□□□□□ -0.95
CNTNAP3B-215ENST00000619138 A0A1W2PNN7 141 aa9.15□□□□□ -0.95
CNTNAP3B-215ENST00000619138 A6NED7 52 aa9.15□□□□□ -0.95
CNTNAP3B-215ENST00000619138 IGLV6-57P01721 117 aa9.15□□□□□ -0.95
CNTNAP3B-215ENST00000619138 KRTAP10-11P60412 298 aa9.15□□□□□ -0.95
CNTNAP3B-215ENST00000619138 MP68P56378 58 aa9.14□□□□□ -0.95
CNTNAP3B-215ENST00000619138 IGKV2-24A0A0C4DH68 120 aa9.14□□□□□ -0.95
CNTNAP3B-215ENST00000619138 X6R8D5 127 aa9.14□□□□□ -0.95
CNTNAP3B-215ENST00000619138 Q6ZRU5 148 aa9.13□□□□□ -0.95
CNTNAP3B-215ENST00000619138 PRR15LQ9BU68 103 aa9.11□□□□□ -0.95
CNTNAP3B-215ENST00000619138 PKD1L1Q8TDX9 2849 aa9.11□□□□□ -0.95
CNTNAP3B-215ENST00000619138 IGKV4-1P06312 121 aa9.11□□□□□ -0.95
CNTNAP3B-215ENST00000619138 MDFIQ99750 246 aa9.11□□□□□ -0.95
CNTNAP3B-215ENST00000619138 H0Y9J4 135 aa9.1□□□□□ -0.95
CNTNAP3B-215ENST00000619138 A8MUN3 132 aa9.1□□□□□ -0.95
CNTNAP3B-215ENST00000619138 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.08□□□□□ -0.96
CNTNAP3B-215ENST00000619138 ELOF1P60002 83 aaKnown RBP9.08□□□□□ -0.96
CNTNAP3B-215ENST00000619138 M0R378 163 aa9.07□□□□□ -0.96
CNTNAP3B-215ENST00000619138 ATP5EP56381 51 aaPredicted RBP9.06□□□□□ -0.96
CNTNAP3B-215ENST00000619138 PCOTHQ58A44 107 aa9.06□□□□□ -0.96
CNTNAP3B-215ENST00000619138 ST20-AS1Q8NBB2 130 aa9.06□□□□□ -0.96
CNTNAP3B-215ENST00000619138 BCE1O60756 84 aa9.06□□□□□ -0.96
CNTNAP3B-215ENST00000619138 LELP1Q5T871 98 aa9.06□□□□□ -0.96
CNTNAP3B-215ENST00000619138 EPM2AB3EWF7 344 aa9.05□□□□□ -0.96
CNTNAP3B-215ENST00000619138 C1orf137Q5JT78 98 aa9.05□□□□□ -0.96
CNTNAP3B-215ENST00000619138 VPREB1P12018 145 aa9.05□□□□□ -0.96
CNTNAP3B-215ENST00000619138 LYRM9A8MSI8 78 aa9.04□□□□□ -0.96
CNTNAP3B-215ENST00000619138 KPRPQ5T749 579 aaPredicted RBP9.04□□□□□ -0.96
CNTNAP3B-215ENST00000619138 OCR1Q9BZK8 76 aa9.03□□□□□ -0.96
CNTNAP3B-215ENST00000619138 DEFB131BA0A096LNP1 70 aa9.03□□□□□ -0.96
CNTNAP3B-215ENST00000619138 Q6ZTC4 211 aa9.03□□□□□ -0.96
CNTNAP3B-215ENST00000619138 C1orf64Q8NEQ6 169 aa9.03□□□□□ -0.96
CNTNAP3B-215ENST00000619138 LINC00612Q8N6U2 182 aa9.02□□□□□ -0.96
CNTNAP3B-215ENST00000619138 Q6ZRP5 223 aa9.02□□□□□ -0.97
CNTNAP3B-215ENST00000619138 C11orf45Q8TAV5 145 aa9.02□□□□□ -0.97
CNTNAP3B-215ENST00000619138 LINC00528Q8N1L1 170 aa9.01□□□□□ -0.97
CNTNAP3B-215ENST00000619138 Q8NAQ8 132 aa9.01□□□□□ -0.97
CNTNAP3B-215ENST00000619138 K7EQZ3 153 aa9□□□□□ -0.97
CNTNAP3B-215ENST00000619138 RPL37AP61513 92 aaKnown RBP9□□□□□ -0.97
CNTNAP3B-215ENST00000619138 FAM168BA1KXE4 195 aa9□□□□□ -0.97
CNTNAP3B-215ENST00000619138 H3BQ85 93 aa9□□□□□ -0.97
CNTNAP3B-215ENST00000619138 A0A087WSZ3 146 aa8.99□□□□□ -0.97
CNTNAP3B-215ENST00000619138 SERTAD4-AS1Q5TG53 156 aa8.99□□□□□ -0.97
CNTNAP3B-215ENST00000619138 Q8N377 158 aa8.99□□□□□ -0.97
CNTNAP3B-215ENST00000619138 SYCNQ0VAF6 134 aa8.99□□□□□ -0.97
CNTNAP3B-215ENST00000619138 C7orf33Q8WU49 177 aa8.98□□□□□ -0.97
CNTNAP3B-215ENST00000619138 EGFEM1PQ0D2K5 195 aa8.97□□□□□ -0.97
CNTNAP3B-215ENST00000619138 TENM3Q9P273 2699 aa8.96□□□□□ -0.98
CNTNAP3B-215ENST00000619138 A0A1W2PNM2 257 aa8.96□□□□□ -0.98
CNTNAP3B-215ENST00000619138 A8MU10 97 aa8.96□□□□□ -0.98
CNTNAP3B-215ENST00000619138 K7EIL1 84 aa8.95□□□□□ -0.98
CNTNAP3B-215ENST00000619138 F8WDY8 70 aa8.94□□□□□ -0.98
CNTNAP3B-215ENST00000619138 TRAV22A0A0B4J277 110 aa8.93□□□□□ -0.98
CNTNAP3B-215ENST00000619138 CDK2AP2O75956 126 aa8.93□□□□□ -0.98
CNTNAP3B-215ENST00000619138 hDV103S1A0JD37 113 aa8.92□□□□□ -0.98
CNTNAP3B-215ENST00000619138 SPAG11AQ6PDA7 123 aa8.92□□□□□ -0.98
CNTNAP3B-215ENST00000619138 PRLHP81277 87 aa8.92□□□□□ -0.98
CNTNAP3B-215ENST00000619138 ERC2-IT1O76042 136 aa8.92□□□□□ -0.98
CNTNAP3B-215ENST00000619138 PRR34Q9NV39 138 aa8.91□□□□□ -0.98
CNTNAP3B-215ENST00000619138 UBE2AP49459 152 aa8.91□□□□□ -0.98
CNTNAP3B-215ENST00000619138 C15orf56Q8N910 161 aa8.91□□□□□ -0.98
CNTNAP3B-215ENST00000619138 B9D2Q9BPU9 175 aa8.89□□□□□ -0.99
CNTNAP3B-215ENST00000619138 H0Y9P7 68 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms