RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 ERC2-IT1O76042 136 aa5.63□□□□□ -1.51
GPC6-202ENST00000617456 RPL36AP83881 106 aaKnown RBP5.63□□□□□ -1.51
GPC6-202ENST00000617456 S100A7L2Q5SY68 101 aa5.63□□□□□ -1.51
GPC6-202ENST00000617456 RPL36ALQ969Q0 106 aaKnown RBP5.63□□□□□ -1.51
GPC6-202ENST00000617456 OPRPNQ99935 248 aaPredicted RBP5.63□□□□□ -1.51
GPC6-202ENST00000617456 FAT3Q8TDW7 4589 aa5.62□□□□□ -1.51
GPC6-202ENST00000617456 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.62□□□□□ -1.51
GPC6-202ENST00000617456 ZNF815PA8K554 130 aa5.62□□□□□ -1.51
GPC6-202ENST00000617456 Q6ZSA8 131 aa5.62□□□□□ -1.51
GPC6-202ENST00000617456 TMEM256-PLSCR3K7ERE1 68 aa5.61□□□□□ -1.51
GPC6-202ENST00000617456 MRPL51Q4U2R6 128 aaKnown RBP5.61□□□□□ -1.51
GPC6-202ENST00000617456 ATP11AUNQ6ZP68 121 aa5.61□□□□□ -1.51
GPC6-202ENST00000617456 SCXQ7RTU7 201 aa5.61□□□□□ -1.51
GPC6-202ENST00000617456 C20orf197Q8N268 126 aa5.61□□□□□ -1.51
GPC6-202ENST00000617456 C14orf178Q8N769 122 aaPredicted RBP5.61□□□□□ -1.51
GPC6-202ENST00000617456 DIRC1Q969H9 104 aa5.61□□□□□ -1.51
GPC6-202ENST00000617456 TRBV6-8A0A0A6YYG3 113 aa5.6□□□□□ -1.51
GPC6-202ENST00000617456 A8MUN3 132 aa5.6□□□□□ -1.51
GPC6-202ENST00000617456 M0R381 172 aa5.6□□□□□ -1.51
GPC6-202ENST00000617456 TRIAP1O43715 76 aa5.6□□□□□ -1.51
GPC6-202ENST00000617456 KIAA0087Q14695 138 aa5.6□□□□□ -1.51
GPC6-202ENST00000617456 FAM74A4Q5TZK3 123 aa5.6□□□□□ -1.51
GPC6-202ENST00000617456 D6R8Y8 96 aa5.59□□□□□ -1.51
GPC6-202ENST00000617456 KRTAP10-4P60372 401 aaPredicted RBP5.59□□□□□ -1.51
GPC6-202ENST00000617456 CXCL6P80162 114 aa5.59□□□□□ -1.51
GPC6-202ENST00000617456 C14orf177Q52M58 125 aa5.59□□□□□ -1.51
GPC6-202ENST00000617456 TIMM17AQ99595 171 aa5.59□□□□□ -1.51
GPC6-202ENST00000617456 A0A087X002 238 aa5.58□□□□□ -1.52
GPC6-202ENST00000617456 SPANXN1Q5VSR9 72 aa5.58□□□□□ -1.52
GPC6-202ENST00000617456 SFTA2Q6UW10 78 aa5.58□□□□□ -1.52
GPC6-202ENST00000617456 C7orf65Q6ZTY9 151 aa5.58□□□□□ -1.52
GPC6-202ENST00000617456 Q8N3U1 123 aa5.58□□□□□ -1.52
GPC6-202ENST00000617456 OBSCN-AS1Q96MR7 158 aa5.58□□□□□ -1.52
GPC6-202ENST00000617456 PKHD1L1Q86WI1 4243 aa5.57□□□□□ -1.52
GPC6-202ENST00000617456 SDHAF1A6NFY7 115 aa5.57□□□□□ -1.52
GPC6-202ENST00000617456 A6NN06 94 aa5.57□□□□□ -1.52
GPC6-202ENST00000617456 PRSS2P07478 247 aa5.57□□□□□ -1.52
GPC6-202ENST00000617456 MIAQ16674 131 aa5.57□□□□□ -1.52
GPC6-202ENST00000617456 CIRBP-AS1Q8TBR5 109 aa5.57□□□□□ -1.52
GPC6-202ENST00000617456 KIF25-AS1Q9Y6Z4 181 aa5.57□□□□□ -1.52
GPC6-202ENST00000617456 CNFNQ9BYD5 112 aa5.56□□□□□ -1.52
GPC6-202ENST00000617456 KLK12Q9UKR0 248 aa5.56□□□□□ -1.52
GPC6-202ENST00000617456 IGKV2D-24A0A075B6R9 120 aa5.55□□□□□ -1.52
GPC6-202ENST00000617456 A0A1B0GUV1 79 aa5.55□□□□□ -1.52
GPC6-202ENST00000617456 F8WEM9 126 aa5.55□□□□□ -1.52
GPC6-202ENST00000617456 RPL37AP61513 92 aaKnown RBP5.55□□□□□ -1.52
GPC6-202ENST00000617456 NRACQ8N912 160 aa5.55□□□□□ -1.52
GPC6-202ENST00000617456 AMELXQ99217 191 aa5.55□□□□□ -1.52
GPC6-202ENST00000617456 PRR34Q9NV39 138 aa5.55□□□□□ -1.52
GPC6-202ENST00000617456 RNF213Q63HN8 5207 aa5.54□□□□□ -1.52
GPC6-202ENST00000617456 LOC389332A0A1B0GUA5 103 aa5.54□□□□□ -1.52
GPC6-202ENST00000617456 IGIPA6NJ69 53 aa5.54□□□□□ -1.52
GPC6-202ENST00000617456 F5H697 171 aa5.54□□□□□ -1.52
GPC6-202ENST00000617456 M0QY20 66 aa5.54□□□□□ -1.52
GPC6-202ENST00000617456 CRPP02741 224 aa5.54□□□□□ -1.52
GPC6-202ENST00000617456 ENHOQ6UWT2 76 aa5.54□□□□□ -1.52
GPC6-202ENST00000617456 C11orf86A6NJI1 115 aa5.53□□□□□ -1.52
GPC6-202ENST00000617456 UBE2AP49459 152 aa5.53□□□□□ -1.52
GPC6-202ENST00000617456 CIRBPQ14011 172 aaKnown RBP5.53□□□□□ -1.52
GPC6-202ENST00000617456 ASB16-AS1Q495Z4 193 aa5.53□□□□□ -1.52
GPC6-202ENST00000617456 NKAPP1Q8N9T2 125 aa5.53□□□□□ -1.52
GPC6-202ENST00000617456 H0Y9J4 135 aa5.52□□□□□ -1.53
GPC6-202ENST00000617456 ANGP03950 147 aaKnown RBP5.52□□□□□ -1.53
GPC6-202ENST00000617456 NTM-AS1Q6ZSK4 140 aa5.52□□□□□ -1.53
GPC6-202ENST00000617456 C22orf24Q9Y442 160 aa5.52□□□□□ -1.53
GPC6-202ENST00000617456 IGHV3OR16-9A0A0B4J2B5 98 aa5.51□□□□□ -1.53
GPC6-202ENST00000617456 A0A0J9YXY3 114 aa5.51□□□□□ -1.53
GPC6-202ENST00000617456 COX7A2LO14548 114 aa5.51□□□□□ -1.53
GPC6-202ENST00000617456 MT1HL1P0DM35 61 aa5.51□□□□□ -1.53
GPC6-202ENST00000617456 RPL28P46779 137 aaKnown RBP5.51□□□□□ -1.53
GPC6-202ENST00000617456 Q1RN00 199 aa5.51□□□□□ -1.53
GPC6-202ENST00000617456 FAM229BQ4G0N7 80 aa5.51□□□□□ -1.53
GPC6-202ENST00000617456 NOTCH2NLQ7Z3S9 236 aa5.51□□□□□ -1.53
GPC6-202ENST00000617456 FAM19A3Q7Z5A8 133 aa5.51□□□□□ -1.53
GPC6-202ENST00000617456 MPLKIPQ8TAP9 179 aa5.51□□□□□ -1.53
GPC6-202ENST00000617456 RNF185Q96GF1 192 aa5.51□□□□□ -1.53
GPC6-202ENST00000617456 LRP2P98164 4655 aa5.5□□□□□ -1.53
GPC6-202ENST00000617456 A0A0A0MQY5 61 aa5.5□□□□□ -1.53
GPC6-202ENST00000617456 hDV103S1A0JD37 113 aa5.5□□□□□ -1.53
GPC6-202ENST00000617456 I3L3M4 83 aa5.5□□□□□ -1.53
GPC6-202ENST00000617456 MP68P56378 58 aa5.5□□□□□ -1.53
GPC6-202ENST00000617456 SYCNQ0VAF6 134 aa5.5□□□□□ -1.53
GPC6-202ENST00000617456 SUMO4Q6EEV6 95 aa5.5□□□□□ -1.53
GPC6-202ENST00000617456 LYZL1Q6UWQ5 148 aa5.5□□□□□ -1.53
GPC6-202ENST00000617456 LINC00337Q8N6G1 96 aa5.5□□□□□ -1.53
GPC6-202ENST00000617456 C9orf163Q8N9P6 203 aa5.5□□□□□ -1.53
GPC6-202ENST00000617456 SCGB3A1Q96QR1 104 aa5.5□□□□□ -1.53
GPC6-202ENST00000617456 CYP4F30PQ9H0H9 118 aa5.5□□□□□ -1.53
GPC6-202ENST00000617456 LINC00313P59037 77 aa5.49□□□□□ -1.53
GPC6-202ENST00000617456 CNBPP62633 177 aaKnown RBP5.49□□□□□ -1.53
GPC6-202ENST00000617456 REG3AQ06141 175 aa5.49□□□□□ -1.53
GPC6-202ENST00000617456 KRTAP26-1Q6PEX3 210 aa5.49□□□□□ -1.53
GPC6-202ENST00000617456 MUSTN1Q8IVN3 82 aa5.49□□□□□ -1.53
GPC6-202ENST00000617456 LINC00269Q8N2A0 174 aa5.49□□□□□ -1.53
GPC6-202ENST00000617456 TNXBP22105 4242 aa5.48□□□□□ -1.53
GPC6-202ENST00000617456 A0A087WVE0 104 aa5.48□□□□□ -1.53
GPC6-202ENST00000617456 TRBV7-4A0A0J9YYF1 115 aa5.48□□□□□ -1.53
GPC6-202ENST00000617456 LEPROTO15243 131 aa5.48□□□□□ -1.53
GPC6-202ENST00000617456 DNAL4O96015 105 aa5.48□□□□□ -1.53
GPC6-202ENST00000617456 BAALC-AS2P0C853 105 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms