RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 ZNF861PO60384 105 aa3.02□□□□□ -1.93
CHD9-221ENST00000615216 C9orf129Q5T035 196 aaKnown RBP3.01□□□□□ -1.93
CHD9-221ENST00000615216 MIR22HGQ0VDD5 57 aa3.01□□□□□ -1.93
CHD9-221ENST00000615216 ZNF462Q96JM2 2506 aa3□□□□□ -1.93
CHD9-221ENST00000615216 IGLV8-61A0A075B6I0 122 aa3□□□□□ -1.93
CHD9-221ENST00000615216 KRTAP10-11P60412 298 aa3□□□□□ -1.93
CHD9-221ENST00000615216 Q8N377 158 aa3□□□□□ -1.93
CHD9-221ENST00000615216 CNBPP62633 177 aaKnown RBP3□□□□□ -1.93
CHD9-221ENST00000615216 CRIPTQ9P021 101 aa2.99□□□□□ -1.93
CHD9-221ENST00000615216 DSCR10P59022 87 aa2.99□□□□□ -1.93
CHD9-221ENST00000615216 IGLV5-37A0A075B6J1 123 aa2.99□□□□□ -1.93
CHD9-221ENST00000615216 A0A096LNT2 108 aa2.99□□□□□ -1.93
CHD9-221ENST00000615216 ACANP16112 2415 aa2.99□□□□□ -1.93
CHD9-221ENST00000615216 H7BZZ5 65 aa2.99□□□□□ -1.93
CHD9-221ENST00000615216 A8MUN3 132 aa2.99□□□□□ -1.93
CHD9-221ENST00000615216 OBSCN-AS1Q96MR7 158 aa2.98□□□□□ -1.93
CHD9-221ENST00000615216 GIG44P09565 113 aaPredicted RBP2.98□□□□□ -1.93
CHD9-221ENST00000615216 K7EIL1 84 aa2.98□□□□□ -1.93
CHD9-221ENST00000615216 KTN1-AS1Q86SY8 53 aa2.98□□□□□ -1.93
CHD9-221ENST00000615216 A0A087WTM6 91 aa2.98□□□□□ -1.93
CHD9-221ENST00000615216 CD164Q04900 197 aa2.97□□□□□ -1.93
CHD9-221ENST00000615216 J3QL48 77 aa2.97□□□□□ -1.93
CHD9-221ENST00000615216 SPRR4Q96PI1 79 aa2.97□□□□□ -1.93
CHD9-221ENST00000615216 IGLV7-43P04211 117 aa2.97□□□□□ -1.93
CHD9-221ENST00000615216 C9orf163Q8N9P6 203 aa2.97□□□□□ -1.93
CHD9-221ENST00000615216 LINC00336Q6ZUF6 198 aa2.97□□□□□ -1.93
CHD9-221ENST00000615216 POLQO75417 2590 aa2.96□□□□□ -1.94
CHD9-221ENST00000615216 RBM12B-AS1Q9P1G2 102 aa2.96□□□□□ -1.94
CHD9-221ENST00000615216 APLNQ9ULZ1 77 aa2.96□□□□□ -1.94
CHD9-221ENST00000615216 COX6B2Q6YFQ2 88 aa2.95□□□□□ -1.94
CHD9-221ENST00000615216 CDC42SE1Q9NRR8 79 aa2.95□□□□□ -1.94
CHD9-221ENST00000615216 FAM104AQ969W3 186 aa2.95□□□□□ -1.94
CHD9-221ENST00000615216 IGLV5-48A0A075B6I7 105 aa2.95□□□□□ -1.94
CHD9-221ENST00000615216 Q1T7F1 81 aa2.95□□□□□ -1.94
CHD9-221ENST00000615216 ZNF575Q86XF7 245 aa2.94□□□□□ -1.94
CHD9-221ENST00000615216 LCA10Q71F78 164 aa2.94□□□□□ -1.94
CHD9-221ENST00000615216 KRTAP10-3P60369 221 aa2.94□□□□□ -1.94
CHD9-221ENST00000615216 C9orf92A6NGG3 77 aa2.94□□□□□ -1.94
CHD9-221ENST00000615216 PSORS1C2Q9UIG4 136 aa2.94□□□□□ -1.94
CHD9-221ENST00000615216 A0A1W2PNN7 141 aa2.93□□□□□ -1.94
CHD9-221ENST00000615216 A0A1W2PNM2 257 aa2.93□□□□□ -1.94
CHD9-221ENST00000615216 OCR1Q9BZK8 76 aa2.92□□□□□ -1.94
CHD9-221ENST00000615216 WIPF1O43516 503 aa2.91□□□□□ -1.94
CHD9-221ENST00000615216 PRRC2CQ9Y520 2896 aaKnown RBP2.91□□□□□ -1.94
CHD9-221ENST00000615216 FAM229BQ4G0N7 80 aa2.91□□□□□ -1.94
CHD9-221ENST00000615216 FASNP49327 2511 aaKnown RBP2.91□□□□□ -1.94
CHD9-221ENST00000615216 Q75L30 129 aa2.9□□□□□ -1.94
CHD9-221ENST00000615216 KRTAP1-3Q8IUG1 177 aa2.9□□□□□ -1.94
CHD9-221ENST00000615216 CENPFP49454 3210 aa2.9□□□□□ -1.94
CHD9-221ENST00000615216 FLNAP21333 2647 aaKnown RBP2.9□□□□□ -1.95
CHD9-221ENST00000615216 IGLV7-46A0A075B6I9 117 aa2.89□□□□□ -1.95
CHD9-221ENST00000615216 A0A0G2JQZ4 141 aa2.89□□□□□ -1.95
CHD9-221ENST00000615216 USP24Q9UPU5 2620 aa2.89□□□□□ -1.95
CHD9-221ENST00000615216 ANAPC11Q9NYG5 84 aa2.89□□□□□ -1.95
CHD9-221ENST00000615216 CASC10Q5T4H9 136 aa2.88□□□□□ -1.95
CHD9-221ENST00000615216 Q8N1X5 172 aa2.88□□□□□ -1.95
CHD9-221ENST00000615216 KRTAP1-1Q07627 177 aa2.88□□□□□ -1.95
CHD9-221ENST00000615216 BPTFQ12830 3046 aa2.88□□□□□ -1.95
CHD9-221ENST00000615216 A0A0D9SG42 100 aa2.87□□□□□ -1.95
CHD9-221ENST00000615216 LINC00483Q53H64 154 aa2.87□□□□□ -1.95
CHD9-221ENST00000615216 LUZP6Q538Z0 58 aa2.87□□□□□ -1.95
CHD9-221ENST00000615216 A0A1B0GU33 70 aa2.86□□□□□ -1.95
CHD9-221ENST00000615216 SMR3BP02814 79 aaPredicted RBP2.86□□□□□ -1.95
CHD9-221ENST00000615216 PRR26Q8N8Z3 221 aa2.85□□□□□ -1.95
CHD9-221ENST00000615216 ITPR3Q14573 2671 aa2.85□□□□□ -1.95
CHD9-221ENST00000615216 HRES1P13985 223 aa2.85□□□□□ -1.95
CHD9-221ENST00000615216 Q6ZSA8 131 aa2.85□□□□□ -1.95
CHD9-221ENST00000615216 PLAC8Q9NZF1 115 aa2.85□□□□□ -1.95
CHD9-221ENST00000615216 ZCCHC13Q8WW36 166 aaKnown RBP2.84□□□□□ -1.95
CHD9-221ENST00000615216 LINC01558Q9Y6Z2 57 aa2.84□□□□□ -1.95
CHD9-221ENST00000615216 KMT2BQ9UMN6 2715 aaPredicted RBP2.84□□□□□ -1.95
CHD9-221ENST00000615216 SPRR1AP35321 89 aa2.84□□□□□ -1.95
CHD9-221ENST00000615216 DMAC1Q96GE9 116 aa2.84□□□□□ -1.95
CHD9-221ENST00000615216 MMP24-AS1A0A0U1RRL7 71 aa2.84□□□□□ -1.95
CHD9-221ENST00000615216 LINC01554Q52M75 96 aa2.84□□□□□ -1.95
CHD9-221ENST00000615216 S4R3F8 94 aa2.84□□□□□ -1.96
CHD9-221ENST00000615216 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.83□□□□□ -1.96
CHD9-221ENST00000615216 SPRR1BP22528 89 aa2.82□□□□□ -1.96
CHD9-221ENST00000615216 EPG5Q9HCE0 2579 aa2.82□□□□□ -1.96
CHD9-221ENST00000615216 TNP2Q05952 138 aa2.81□□□□□ -1.96
CHD9-221ENST00000615216 ATRQ13535 2644 aa2.81□□□□□ -1.96
CHD9-221ENST00000615216 Q8N9P0 234 aaPredicted RBP2.81□□□□□ -1.96
CHD9-221ENST00000615216 Q5XG85 94 aa2.81□□□□□ -1.96
CHD9-221ENST00000615216 HELZ2Q9BYK8 2649 aaKnown RBP2.81□□□□□ -1.96
CHD9-221ENST00000615216 Q5W150 140 aa2.8□□□□□ -1.96
CHD9-221ENST00000615216 LINC00472Q9H8W2 130 aa2.8□□□□□ -1.96
CHD9-221ENST00000615216 CAMK2N1Q7Z7J9 78 aa2.8□□□□□ -1.96
CHD9-221ENST00000615216 CSAG1Q6PB30 78 aa2.8□□□□□ -1.96
CHD9-221ENST00000615216 MAST4O15021 2626 aa2.79□□□□□ -1.96
CHD9-221ENST00000615216 CFAP46Q8IYW2 2715 aa2.79□□□□□ -1.96
CHD9-221ENST00000615216 Q5VV11 94 aa2.79□□□□□ -1.96
CHD9-221ENST00000615216 FLG2Q5D862 2391 aaPredicted RBP2.79□□□□□ -1.96
CHD9-221ENST00000615216 DNAH12Q6ZR08 3092 aa2.78□□□□□ -1.96
CHD9-221ENST00000615216 MGAM2Q2M2H8 2515 aa2.78□□□□□ -1.96
CHD9-221ENST00000615216 ASB16-AS1Q495Z4 193 aa2.78□□□□□ -1.96
CHD9-221ENST00000615216 HECTD1Q9ULT8 2610 aa2.78□□□□□ -1.97
CHD9-221ENST00000615216 FP248Q71RG6 208 aaPredicted RBP2.77□□□□□ -1.97
CHD9-221ENST00000615216 Q8NDZ9 215 aa2.77□□□□□ -1.97
CHD9-221ENST00000615216 Q6ZR54 194 aa2.76□□□□□ -1.97
CHD9-221ENST00000615216 SEC61BP60468 96 aaKnown RBP2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms