RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 EIF4EBP3O60516 100 aaPredicted RBP10.45□□□□□ -0.74
VCX3A-203ENST00000612369 C3orf79P0CE67 100 aa10.45□□□□□ -0.74
VCX3A-203ENST00000612369 TPRXLQ17RH7 258 aa10.45□□□□□ -0.74
VCX3A-203ENST00000612369 GAGE2AQ6NT46 116 aa10.45□□□□□ -0.74
VCX3A-203ENST00000612369 LITAFQ99732 161 aa10.45□□□□□ -0.74
VCX3A-203ENST00000612369 Q9BRP9 147 aa10.45□□□□□ -0.74
VCX3A-203ENST00000612369 SPANXCQ9NY87 97 aa10.45□□□□□ -0.74
VCX3A-203ENST00000612369 IGLV7-46A0A075B6I9 117 aa10.44□□□□□ -0.74
VCX3A-203ENST00000612369 ZNF73O43830 326 aaPredicted RBP10.44□□□□□ -0.74
VCX3A-203ENST00000612369 ERC2-IT1O76042 136 aa10.44□□□□□ -0.74
VCX3A-203ENST00000612369 Q8NBF4 154 aa10.44□□□□□ -0.74
VCX3A-203ENST00000612369 LINC00308Q8TCZ7 52 aa10.44□□□□□ -0.74
VCX3A-203ENST00000612369 ZNF815PA8K554 130 aa10.43□□□□□ -0.74
VCX3A-203ENST00000612369 SPINK1P00995 79 aa10.42□□□□□ -0.74
VCX3A-203ENST00000612369 HINT1P49773 126 aaPredicted RBP10.42□□□□□ -0.74
VCX3A-203ENST00000612369 C5orf52A6NGY3 159 aa10.41□□□□□ -0.74
VCX3A-203ENST00000612369 SSBP3-AS1Q7Z2R9 100 aa10.41□□□□□ -0.74
VCX3A-203ENST00000612369 C20orf202A1L168 122 aa10.4□□□□□ -0.74
VCX3A-203ENST00000612369 KRTDAPP60985 99 aa10.4□□□□□ -0.74
VCX3A-203ENST00000612369 FP248Q71RG6 208 aaPredicted RBP10.4□□□□□ -0.74
VCX3A-203ENST00000612369 CDIP1Q9H305 208 aa10.4□□□□□ -0.74
VCX3A-203ENST00000612369 AKR1D1P51857 326 aa10.38□□□□□ -0.75
VCX3A-203ENST00000612369 LINC00518Q8N0U6 118 aa10.38□□□□□ -0.75
VCX3A-203ENST00000612369 OR13C6PQ8NH95 151 aa10.38□□□□□ -0.75
VCX3A-203ENST00000612369 SPANXDQ9BXN6 97 aa10.38□□□□□ -0.75
VCX3A-203ENST00000612369 IGLV9-49A0A0B4J1Y8 123 aa10.37□□□□□ -0.75
VCX3A-203ENST00000612369 RPS29P62273 56 aaKnown RBP10.37□□□□□ -0.75
VCX3A-203ENST00000612369 MOBPQ13875 183 aa10.37□□□□□ -0.75
VCX3A-203ENST00000612369 TTTY13Q9BZ97 58 aa10.37□□□□□ -0.75
VCX3A-203ENST00000612369 MUC2Q02817 5179 aa10.36□□□□□ -0.75
VCX3A-203ENST00000612369 A0A0U1RQV1 116 aa10.35□□□□□ -0.75
VCX3A-203ENST00000612369 COPS9Q8WXC6 57 aa10.35□□□□□ -0.75
VCX3A-203ENST00000612369 SCGB1D4Q6XE38 83 aa10.34□□□□□ -0.75
VCX3A-203ENST00000612369 DHRS4-AS1Q9P1J3 65 aa10.33□□□□□ -0.76
VCX3A-203ENST00000612369 Q6ZVH6 145 aa10.32□□□□□ -0.76
VCX3A-203ENST00000612369 IFITM1P13164 125 aa10.31□□□□□ -0.76
VCX3A-203ENST00000612369 ANKRD39Q53RE8 183 aa10.31□□□□□ -0.76
VCX3A-203ENST00000612369 ST20-AS1Q8NBB2 130 aa10.3□□□□□ -0.76
VCX3A-203ENST00000612369 SPRR1BP22528 89 aa10.29□□□□□ -0.76
VCX3A-203ENST00000612369 SNRPEP62304 92 aaKnown RBP10.29□□□□□ -0.76
VCX3A-203ENST00000612369 C9orf153Q5TBE3 101 aa10.29□□□□□ -0.76
VCX3A-203ENST00000612369 SLC25A34Q6PIV7 304 aa10.29□□□□□ -0.76
VCX3A-203ENST00000612369 SLC25A20O43772 301 aa10.28□□□□□ -0.76
VCX3A-203ENST00000612369 COX7BP24311 80 aa10.28□□□□□ -0.76
VCX3A-203ENST00000612369 ELOF1P60002 83 aaKnown RBP10.28□□□□□ -0.76
VCX3A-203ENST00000612369 ATOH7Q8N100 152 aa10.28□□□□□ -0.76
VCX3A-203ENST00000612369 Q8N377 158 aa10.28□□□□□ -0.76
VCX3A-203ENST00000612369 TRBV7-6A0A0J9YX20 115 aa10.27□□□□□ -0.77
VCX3A-203ENST00000612369 C6orf99Q4VX62 202 aa10.27□□□□□ -0.77
VCX3A-203ENST00000612369 KRTAP13-3Q3SY46 172 aa10.26□□□□□ -0.77
VCX3A-203ENST00000612369 PCP2Q8IVA1 136 aa10.25□□□□□ -0.77
VCX3A-203ENST00000612369 LAMTOR3Q9UHA4 124 aa10.24□□□□□ -0.77
VCX3A-203ENST00000612369 MUC17Q685J3 4493 aa10.24□□□□□ -0.77
VCX3A-203ENST00000612369 MUSTN1Q8IVN3 82 aa10.23□□□□□ -0.77
VCX3A-203ENST00000612369 A0A1B0GWB2 263 aa10.22□□□□□ -0.77
VCX3A-203ENST00000612369 A6NDN8 102 aa10.22□□□□□ -0.77
VCX3A-203ENST00000612369 S100A1P23297 94 aa10.22□□□□□ -0.77
VCX3A-203ENST00000612369 S100A2P29034 98 aa10.22□□□□□ -0.77
VCX3A-203ENST00000612369 HIST3H2BBQ8N257 126 aa10.22□□□□□ -0.77
VCX3A-203ENST00000612369 TAL2Q16559 108 aa10.2□□□□□ -0.78
VCX3A-203ENST00000612369 HIST1H2BLQ99880 126 aa10.2□□□□□ -0.78
VCX3A-203ENST00000612369 TRAV13-2A0A0B4J235 113 aa10.19□□□□□ -0.78
VCX3A-203ENST00000612369 A4D1N5 150 aa10.19□□□□□ -0.78
VCX3A-203ENST00000612369 TEX49A0A1B0GTD5 131 aa10.18□□□□□ -0.78
VCX3A-203ENST00000612369 HSBP1L1C9JCN9 74 aa10.18□□□□□ -0.78
VCX3A-203ENST00000612369 LIMD2Q9BT23 127 aa10.17□□□□□ -0.78
VCX3A-203ENST00000612369 S100A6P06703 90 aa10.16□□□□□ -0.78
VCX3A-203ENST00000612369 ASB16-AS1Q495Z4 193 aa10.15□□□□□ -0.78
VCX3A-203ENST00000612369 DEFB105AQ8NG35 78 aa10.15□□□□□ -0.78
VCX3A-203ENST00000612369 NHP2Q9NX24 153 aaKnown RBP10.15□□□□□ -0.78
VCX3A-203ENST00000612369 CD164Q04900 197 aa10.14□□□□□ -0.79
VCX3A-203ENST00000612369 PRO1933Q9H354 126 aa10.14□□□□□ -0.79
VCX3A-203ENST00000612369 IGLV5-48A0A075B6I7 105 aa10.13□□□□□ -0.79
VCX3A-203ENST00000612369 Q1RN00 199 aa10.13□□□□□ -0.79
VCX3A-203ENST00000612369 SEC61BP60468 96 aaKnown RBP10.12□□□□□ -0.79
VCX3A-203ENST00000612369 SMIM11BQ8TCY0 68 aa10.12□□□□□ -0.79
VCX3A-203ENST00000612369 LINC01547P58512 204 aaPredicted RBP10.11□□□□□ -0.79
VCX3A-203ENST00000612369 SMIM29Q86T20 159 aa10.11□□□□□ -0.79
VCX3A-203ENST00000612369 HRCT1Q6UXD1 115 aa10.1□□□□□ -0.79
VCX3A-203ENST00000612369 FAT4Q6V0I7 4981 aa10.09□□□□□ -0.79
VCX3A-203ENST00000612369 VAMP3Q15836 100 aa10.09□□□□□ -0.79
VCX3A-203ENST00000612369 LCE2AQ5TA79 106 aaPredicted RBP10.09□□□□□ -0.79
VCX3A-203ENST00000612369 XP32Q5T750 250 aa10.08□□□□□ -0.8
VCX3A-203ENST00000612369 H7C2G1 150 aa10.07□□□□□ -0.8
VCX3A-203ENST00000612369 Q5XG85 94 aa10.06□□□□□ -0.8
VCX3A-203ENST00000612369 SCGB1D1O95968 90 aa10.05□□□□□ -0.8
VCX3A-203ENST00000612369 LINC00575Q6W349 94 aa10.02□□□□□ -0.81
VCX3A-203ENST00000612369 hADV29S1A0JD25 119 aa10□□□□□ -0.81
VCX3A-203ENST00000612369 COX8AP10176 69 aa10□□□□□ -0.81
VCX3A-203ENST00000612369 HIST1H4GQ99525 98 aa10□□□□□ -0.81
VCX3A-203ENST00000612369 DLEU1O43261 78 aa9.99□□□□□ -0.81
VCX3A-203ENST00000612369 F8WEM9 126 aa9.98□□□□□ -0.81
VCX3A-203ENST00000612369 BVES-AS1Q5T3Y7 98 aa9.97□□□□□ -0.81
VCX3A-203ENST00000612369 Q6ZQY7 126 aa9.97□□□□□ -0.81
VCX3A-203ENST00000612369 KRTAP4-1Q9BYQ7 146 aa9.97□□□□□ -0.81
VCX3A-203ENST00000612369 C1orf195Q5TG92 126 aa9.95□□□□□ -0.82
VCX3A-203ENST00000612369 A0A0G2JQZ4 141 aa9.94□□□□□ -0.82
VCX3A-203ENST00000612369 TCL1BO95988 128 aa9.94□□□□□ -0.82
VCX3A-203ENST00000612369 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.94□□□□□ -0.82
VCX3A-203ENST00000612369 C9orf92A6NGG3 77 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms