RNA–Protein interactions for RNA: ENST00000612349.1

SMAD6-205, Transcript of SMAD family member 6, humanhuman

Gene SMAD6, Length 5,198 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-205ENST00000612349 CENPEQ02224 2701 aa13.82□□□□□ -0.2
SMAD6-205ENST00000612349 ATP11AUNQ6ZP68 121 aa13.82□□□□□ -0.2
SMAD6-205ENST00000612349 A8MWP4 228 aa13.8□□□□□ -0.2
SMAD6-205ENST00000612349 GIG44P09565 113 aaPredicted RBP13.8□□□□□ -0.2
SMAD6-205ENST00000612349 LOC101927531A0A1B0GV80 90 aa13.8□□□□□ -0.2
SMAD6-205ENST00000612349 LINC00528Q8N1L1 170 aa13.8□□□□□ -0.2
SMAD6-205ENST00000612349 KRTAP10-3P60369 221 aa13.79□□□□□ -0.2
SMAD6-205ENST00000612349 Q96NJ1 140 aa13.79□□□□□ -0.2
SMAD6-205ENST00000612349 J3QL48 77 aa13.77□□□□□ -0.21
SMAD6-205ENST00000612349 SSBP3-AS1Q7Z2R9 100 aa13.77□□□□□ -0.21
SMAD6-205ENST00000612349 KRTAP1-3Q8IUG1 177 aa13.77□□□□□ -0.21
SMAD6-205ENST00000612349 CFAP46Q8IYW2 2715 aa13.77□□□□□ -0.21
SMAD6-205ENST00000612349 TM2D3Q9BRN9 247 aa13.76□□□□□ -0.21
SMAD6-205ENST00000612349 C15orf56Q8N910 161 aa13.76□□□□□ -0.21
SMAD6-205ENST00000612349 MRPL34Q9BQ48 92 aaKnown RBP13.74□□□□□ -0.21
SMAD6-205ENST00000612349 C9orf163Q8N9P6 203 aa13.74□□□□□ -0.21
SMAD6-205ENST00000612349 ZNF861PO60384 105 aa13.73□□□□□ -0.21
SMAD6-205ENST00000612349 A0A087WTM6 91 aa13.73□□□□□ -0.21
SMAD6-205ENST00000612349 SPAG11AQ6PDA7 123 aa13.73□□□□□ -0.21
SMAD6-205ENST00000612349 TLX1NBP0CAT3 122 aa13.72□□□□□ -0.21
SMAD6-205ENST00000612349 CHD9Q3L8U1 2897 aa13.72□□□□□ -0.21
SMAD6-205ENST00000612349 RANBP2P49792 3224 aaKnown RBP13.72□□□□□ -0.21
SMAD6-205ENST00000612349 PLA2G2DQ9UNK4 145 aa13.7□□□□□ -0.22
SMAD6-205ENST00000612349 HTTP42858 3142 aa13.7□□□□□ -0.22
SMAD6-205ENST00000612349 C5orf42Q9H799 3197 aa13.7□□□□□ -0.22
SMAD6-205ENST00000612349 KRTAP1-1Q07627 177 aa13.68□□□□□ -0.22
SMAD6-205ENST00000612349 K7EQZ3 153 aa13.66□□□□□ -0.22
SMAD6-205ENST00000612349 IGFL1Q6UW32 110 aa13.66□□□□□ -0.22
SMAD6-205ENST00000612349 LINC00304Q8N9R0 145 aa13.66□□□□□ -0.22
SMAD6-205ENST00000612349 ERC2-IT1O76042 136 aa13.64□□□□□ -0.23
SMAD6-205ENST00000612349 C9orf129Q5T035 196 aaKnown RBP13.64□□□□□ -0.23
SMAD6-205ENST00000612349 LINC00336Q6ZUF6 198 aa13.64□□□□□ -0.23
SMAD6-205ENST00000612349 EIF4EBP3O60516 100 aaPredicted RBP13.6□□□□□ -0.23
SMAD6-205ENST00000612349 PRR15Q8IV56 129 aa13.6□□□□□ -0.23
SMAD6-205ENST00000612349 APLNQ9ULZ1 77 aa13.59□□□□□ -0.23
SMAD6-205ENST00000612349 Q8N377 158 aa13.59□□□□□ -0.23
SMAD6-205ENST00000612349 C8orf17Q9NRJ1 99 aa13.59□□□□□ -0.23
SMAD6-205ENST00000612349 CNBPP62633 177 aaKnown RBP13.57□□□□□ -0.24
SMAD6-205ENST00000612349 ZNF575Q86XF7 245 aa13.55□□□□□ -0.24
SMAD6-205ENST00000612349 A0A1B0GVX0 72 aa13.55□□□□□ -0.24
SMAD6-205ENST00000612349 IGLV7-43P04211 117 aa13.54□□□□□ -0.24
SMAD6-205ENST00000612349 ZNF292O60281 2723 aa13.52□□□□□ -0.24
SMAD6-205ENST00000612349 KLKP1Q107X0 134 aa13.52□□□□□ -0.25
SMAD6-205ENST00000612349 DSCR10P59022 87 aa13.51□□□□□ -0.25
SMAD6-205ENST00000612349 COX6B2Q6YFQ2 88 aa13.51□□□□□ -0.25
SMAD6-205ENST00000612349 PSORS1C2Q9UIG4 136 aa13.48□□□□□ -0.25
SMAD6-205ENST00000612349 A0A1W2PNN7 141 aa13.47□□□□□ -0.25
SMAD6-205ENST00000612349 SMR3BP02814 79 aaPredicted RBP13.47□□□□□ -0.25
SMAD6-205ENST00000612349 OBSCN-AS1Q96MR7 158 aa13.46□□□□□ -0.26
SMAD6-205ENST00000612349 SPRR4Q96PI1 79 aa13.45□□□□□ -0.26
SMAD6-205ENST00000612349 IGLV8-61A0A075B6I0 122 aa13.45□□□□□ -0.26
SMAD6-205ENST00000612349 COA5Q86WW8 74 aa13.44□□□□□ -0.26
SMAD6-205ENST00000612349 LINC01600Q96MT4 127 aa13.44□□□□□ -0.26
SMAD6-205ENST00000612349 TEP1Q99973 2627 aaKnown RBP13.43□□□□□ -0.26
SMAD6-205ENST00000612349 A8MUN3 132 aa13.42□□□□□ -0.26
SMAD6-205ENST00000612349 CASC10Q5T4H9 136 aa13.42□□□□□ -0.26
SMAD6-205ENST00000612349 TRANK1O15050 2925 aa13.41□□□□□ -0.26
SMAD6-205ENST00000612349 H7BZZ5 65 aa13.41□□□□□ -0.26
SMAD6-205ENST00000612349 IGLV5-37A0A075B6J1 123 aa13.4□□□□□ -0.26
SMAD6-205ENST00000612349 LAMA3Q16787 3333 aa13.4□□□□□ -0.27
SMAD6-205ENST00000612349 MGAQ8IWI9 3026 aa13.39□□□□□ -0.27
SMAD6-205ENST00000612349 CYP4F30PQ9H0H9 118 aa13.38□□□□□ -0.27
SMAD6-205ENST00000612349 UQCR11O14957 56 aa13.38□□□□□ -0.27
SMAD6-205ENST00000612349 C9orf92A6NGG3 77 aa13.37□□□□□ -0.27
SMAD6-205ENST00000612349 ANAPC11Q9NYG5 84 aa13.37□□□□□ -0.27
SMAD6-205ENST00000612349 SETXQ7Z333 2677 aaKnown RBP13.36□□□□□ -0.27
SMAD6-205ENST00000612349 AKAP13Q12802 2813 aa13.35□□□□□ -0.27
SMAD6-205ENST00000612349 MKI67P46013 3256 aaKnown RBP13.35□□□□□ -0.27
SMAD6-205ENST00000612349 A0A0G2JQZ4 141 aa13.33□□□□□ -0.27
SMAD6-205ENST00000612349 STAB1Q9NY15 2570 aa13.33□□□□□ -0.27
SMAD6-205ENST00000612349 A0A1W2PNM2 257 aa13.32□□□□□ -0.28
SMAD6-205ENST00000612349 WIPF1O43516 503 aa13.31□□□□□ -0.28
SMAD6-205ENST00000612349 RBM12B-AS1Q9P1G2 102 aa13.29□□□□□ -0.28
SMAD6-205ENST00000612349 IGLV5-48A0A075B6I7 105 aa13.28□□□□□ -0.28
SMAD6-205ENST00000612349 TEX15Q9BXT5 2789 aa13.27□□□□□ -0.28
SMAD6-205ENST00000612349 CHD6Q8TD26 2715 aa13.25□□□□□ -0.29
SMAD6-205ENST00000612349 BRCA2P51587 3418 aa13.25□□□□□ -0.29
SMAD6-205ENST00000612349 TNP2Q05952 138 aa13.23□□□□□ -0.29
SMAD6-205ENST00000612349 COL6A5A8TX70 2615 aa13.22□□□□□ -0.29
SMAD6-205ENST00000612349 CD164Q04900 197 aa13.22□□□□□ -0.29
SMAD6-205ENST00000612349 CFAP54Q96N23 3096 aa13.22□□□□□ -0.29
SMAD6-205ENST00000612349 WDFY4Q6ZS81 3184 aa13.18□□□□□ -0.3
SMAD6-205ENST00000612349 A0A0C4DFX4 3053 aa13.17□□□□□ -0.3
SMAD6-205ENST00000612349 MIR22HGQ0VDD5 57 aa13.17□□□□□ -0.3
SMAD6-205ENST00000612349 SPANXA2-OT1Q8N9U9 137 aa13.15□□□□□ -0.3
SMAD6-205ENST00000612349 DSPP15924 2871 aaKnown RBP13.15□□□□□ -0.3
SMAD6-205ENST00000612349 UNC79Q9P2D8 2635 aa13.14□□□□□ -0.31
SMAD6-205ENST00000612349 CRIPTQ9P021 101 aa13.11□□□□□ -0.31
SMAD6-205ENST00000612349 CR1P17927 2039 aa13.1□□□□□ -0.31
SMAD6-205ENST00000612349 PRUNE2Q8WUY3 3088 aa13.1□□□□□ -0.31
SMAD6-205ENST00000612349 SPINT4Q6UDR6 99 aa13.1□□□□□ -0.31
SMAD6-205ENST00000612349 BAHCC1Q9P281 2608 aa13.09□□□□□ -0.31
SMAD6-205ENST00000612349 FAM104AQ969W3 186 aa13.09□□□□□ -0.31
SMAD6-205ENST00000612349 FAM229BQ4G0N7 80 aa13.08□□□□□ -0.32
SMAD6-205ENST00000612349 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.08□□□□□ -0.32
SMAD6-205ENST00000612349 KTN1-AS1Q86SY8 53 aa13.08□□□□□ -0.32
SMAD6-205ENST00000612349 LAMA2P24043 3122 aaKnown RBP13.07□□□□□ -0.32
SMAD6-205ENST00000612349 NOTCH1P46531 2555 aa13.07□□□□□ -0.32
SMAD6-205ENST00000612349 IGSF10Q6WRI0 2623 aa13.05□□□□□ -0.32
SMAD6-205ENST00000612349 MAP1AP78559 2803 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms