RNA–Protein interactions for RNA: ENST00000611717.4

PPP4R3B-203, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PPP4R3B, Length 5,243 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-203ENST00000611717 TRBV7-4A0A0J9YYF1 115 aa8.61□□□□□ -1.03
PPP4R3B-203ENST00000611717 C9orf129Q5T035 196 aaKnown RBP8.61□□□□□ -1.03
PPP4R3B-203ENST00000611717 IGKV2D-30A0A075B6S6 120 aa8.61□□□□□ -1.03
PPP4R3B-203ENST00000611717 SMIM26A0A096LP01 95 aa8.61□□□□□ -1.03
PPP4R3B-203ENST00000611717 IGKV2-30P06310 120 aa8.61□□□□□ -1.03
PPP4R3B-203ENST00000611717 PLA2G2DQ9UNK4 145 aa8.61□□□□□ -1.03
PPP4R3B-203ENST00000611717 MGAM2Q2M2H8 2515 aa8.61□□□□□ -1.03
PPP4R3B-203ENST00000611717 PRUNE2Q8WUY3 3088 aa8.6□□□□□ -1.03
PPP4R3B-203ENST00000611717 LINC00336Q6ZUF6 198 aa8.59□□□□□ -1.03
PPP4R3B-203ENST00000611717 CFAP46Q8IYW2 2715 aa8.59□□□□□ -1.03
PPP4R3B-203ENST00000611717 LINC00313P59037 77 aa8.58□□□□□ -1.04
PPP4R3B-203ENST00000611717 EIF4EBP3O60516 100 aaPredicted RBP8.57□□□□□ -1.04
PPP4R3B-203ENST00000611717 ZNF575Q86XF7 245 aa8.57□□□□□ -1.04
PPP4R3B-203ENST00000611717 CNBPP62633 177 aaKnown RBP8.57□□□□□ -1.04
PPP4R3B-203ENST00000611717 SPINK1P00995 79 aa8.57□□□□□ -1.04
PPP4R3B-203ENST00000611717 ZNF861PO60384 105 aa8.56□□□□□ -1.04
PPP4R3B-203ENST00000611717 CR1P17927 2039 aa8.56□□□□□ -1.04
PPP4R3B-203ENST00000611717 CASC10Q5T4H9 136 aa8.55□□□□□ -1.04
PPP4R3B-203ENST00000611717 TRIOO75962 3097 aa8.54□□□□□ -1.04
PPP4R3B-203ENST00000611717 USP24Q9UPU5 2620 aa8.53□□□□□ -1.04
PPP4R3B-203ENST00000611717 J3QL48 77 aa8.52□□□□□ -1.05
PPP4R3B-203ENST00000611717 C8orf87E5RJ46 101 aa8.52□□□□□ -1.05
PPP4R3B-203ENST00000611717 C7orf65Q6ZTY9 151 aa8.51□□□□□ -1.05
PPP4R3B-203ENST00000611717 ATRQ13535 2644 aa8.51□□□□□ -1.05
PPP4R3B-203ENST00000611717 H3BPC8 53 aa8.51□□□□□ -1.05
PPP4R3B-203ENST00000611717 SSBP3-AS1Q7Z2R9 100 aa8.51□□□□□ -1.05
PPP4R3B-203ENST00000611717 A8MWP4 228 aa8.51□□□□□ -1.05
PPP4R3B-203ENST00000611717 IGFL1Q6UW32 110 aa8.5□□□□□ -1.05
PPP4R3B-203ENST00000611717 A0A1W2PNN7 141 aa8.5□□□□□ -1.05
PPP4R3B-203ENST00000611717 Q96NJ1 140 aa8.49□□□□□ -1.05
PPP4R3B-203ENST00000611717 MAST4O15021 2626 aa8.48□□□□□ -1.05
PPP4R3B-203ENST00000611717 TRAV22A0A0B4J277 110 aa8.48□□□□□ -1.05
PPP4R3B-203ENST00000611717 SPAG11AQ6PDA7 123 aa8.48□□□□□ -1.05
PPP4R3B-203ENST00000611717 IGLV7-43P04211 117 aa8.48□□□□□ -1.05
PPP4R3B-203ENST00000611717 Q8N377 158 aa8.47□□□□□ -1.05
PPP4R3B-203ENST00000611717 LINC00304Q8N9R0 145 aa8.47□□□□□ -1.05
PPP4R3B-203ENST00000611717 CENPEQ02224 2701 aa8.46□□□□□ -1.05
PPP4R3B-203ENST00000611717 CFAP54Q96N23 3096 aa8.46□□□□□ -1.06
PPP4R3B-203ENST00000611717 SMR3BP02814 79 aaPredicted RBP8.46□□□□□ -1.06
PPP4R3B-203ENST00000611717 PSORS1C2Q9UIG4 136 aa8.46□□□□□ -1.06
PPP4R3B-203ENST00000611717 ATP11AUNQ6ZP68 121 aa8.46□□□□□ -1.06
PPP4R3B-203ENST00000611717 A0A0U1RQV1 116 aa8.45□□□□□ -1.06
PPP4R3B-203ENST00000611717 ACYP2P14621 99 aa8.45□□□□□ -1.06
PPP4R3B-203ENST00000611717 CDH23Q9H251 3354 aa8.45□□□□□ -1.06
PPP4R3B-203ENST00000611717 IGLV5-37A0A075B6J1 123 aa8.45□□□□□ -1.06
PPP4R3B-203ENST00000611717 K7EQZ3 153 aa8.44□□□□□ -1.06
PPP4R3B-203ENST00000611717 MRPL34Q9BQ48 92 aaKnown RBP8.44□□□□□ -1.06
PPP4R3B-203ENST00000611717 MGAQ8IWI9 3026 aa8.42□□□□□ -1.06
PPP4R3B-203ENST00000611717 SPRR4Q96PI1 79 aa8.41□□□□□ -1.06
PPP4R3B-203ENST00000611717 LOC101927531A0A1B0GV80 90 aa8.41□□□□□ -1.06
PPP4R3B-203ENST00000611717 XIRP2A4UGR9 3374 aa8.41□□□□□ -1.06
PPP4R3B-203ENST00000611717 TNP2Q05952 138 aa8.4□□□□□ -1.06
PPP4R3B-203ENST00000611717 PSPHP1O15172 72 aa8.39□□□□□ -1.07
PPP4R3B-203ENST00000611717 AKAP13Q12802 2813 aa8.39□□□□□ -1.07
PPP4R3B-203ENST00000611717 ERC2-IT1O76042 136 aa8.38□□□□□ -1.07
PPP4R3B-203ENST00000611717 PRR15Q8IV56 129 aa8.38□□□□□ -1.07
PPP4R3B-203ENST00000611717 ANAPC11Q9NYG5 84 aa8.38□□□□□ -1.07
PPP4R3B-203ENST00000611717 C8orf17Q9NRJ1 99 aa8.37□□□□□ -1.07
PPP4R3B-203ENST00000611717 A0A1B0GVX0 72 aa8.36□□□□□ -1.07
PPP4R3B-203ENST00000611717 DSCR10P59022 87 aa8.36□□□□□ -1.07
PPP4R3B-203ENST00000611717 FAM104AQ969W3 186 aa8.36□□□□□ -1.07
PPP4R3B-203ENST00000611717 WDFY4Q6ZS81 3184 aa8.36□□□□□ -1.07
PPP4R3B-203ENST00000611717 A0A0G2JQZ4 141 aa8.34□□□□□ -1.07
PPP4R3B-203ENST00000611717 A0A1B0GU69 56 aa8.34□□□□□ -1.07
PPP4R3B-203ENST00000611717 VPS13AQ96RL7 3174 aa8.33□□□□□ -1.08
PPP4R3B-203ENST00000611717 IGSF10Q6WRI0 2623 aa8.32□□□□□ -1.08
PPP4R3B-203ENST00000611717 OBSCN-AS1Q96MR7 158 aa8.32□□□□□ -1.08
PPP4R3B-203ENST00000611717 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.29□□□□□ -1.08
PPP4R3B-203ENST00000611717 A0A1W2PNM2 257 aa8.29□□□□□ -1.08
PPP4R3B-203ENST00000611717 C9orf92A6NGG3 77 aa8.29□□□□□ -1.08
PPP4R3B-203ENST00000611717 UNC79Q9P2D8 2635 aa8.28□□□□□ -1.08
PPP4R3B-203ENST00000611717 IGLV5-48A0A075B6I7 105 aa8.28□□□□□ -1.08
PPP4R3B-203ENST00000611717 C1orf195Q5TG92 126 aa8.28□□□□□ -1.08
PPP4R3B-203ENST00000611717 LAMA1P25391 3075 aa8.28□□□□□ -1.08
PPP4R3B-203ENST00000611717 SZT2Q5T011 3432 aa8.27□□□□□ -1.08
PPP4R3B-203ENST00000611717 PMAIP1Q13794 54 aa8.27□□□□□ -1.09
PPP4R3B-203ENST00000611717 DSPP15924 2871 aaKnown RBP8.26□□□□□ -1.09
PPP4R3B-203ENST00000611717 TEP1Q99973 2627 aaKnown RBP8.25□□□□□ -1.09
PPP4R3B-203ENST00000611717 CD164Q04900 197 aa8.23□□□□□ -1.09
PPP4R3B-203ENST00000611717 COX6B2Q6YFQ2 88 aa8.23□□□□□ -1.09
PPP4R3B-203ENST00000611717 PLAC8Q9NZF1 115 aa8.23□□□□□ -1.09
PPP4R3B-203ENST00000611717 RPS28P62857 69 aaKnown RBP8.22□□□□□ -1.09
PPP4R3B-203ENST00000611717 VCANP13611 3396 aa8.18□□□□□ -1.1
PPP4R3B-203ENST00000611717 TEX15Q9BXT5 2789 aa8.18□□□□□ -1.1
PPP4R3B-203ENST00000611717 DNAH14Q0VDD8 3507 aa8.18□□□□□ -1.1
PPP4R3B-203ENST00000611717 FAM229BQ4G0N7 80 aa8.18□□□□□ -1.1
PPP4R3B-203ENST00000611717 BAHCC1Q9P281 2608 aa8.17□□□□□ -1.1
PPP4R3B-203ENST00000611717 COA5Q86WW8 74 aa8.17□□□□□ -1.1
PPP4R3B-203ENST00000611717 KRTAP1-5Q9BYS1 174 aa8.16□□□□□ -1.1
PPP4R3B-203ENST00000611717 COL6A5A8TX70 2615 aa8.16□□□□□ -1.1
PPP4R3B-203ENST00000611717 LINC01600Q96MT4 127 aa8.16□□□□□ -1.1
PPP4R3B-203ENST00000611717 KLKP1Q107X0 134 aa8.16□□□□□ -1.1
PPP4R3B-203ENST00000611717 MAP1AP78559 2803 aaPredicted RBP8.15□□□□□ -1.1
PPP4R3B-203ENST00000611717 SPRR1AP35321 89 aa8.15□□□□□ -1.11
PPP4R3B-203ENST00000611717 PRR26Q8N8Z3 221 aa8.14□□□□□ -1.11
PPP4R3B-203ENST00000611717 CELSR3Q9NYQ7 3312 aa8.13□□□□□ -1.11
PPP4R3B-203ENST00000611717 STAB1Q9NY15 2570 aa8.13□□□□□ -1.11
PPP4R3B-203ENST00000611717 KRTAP26-1Q6PEX3 210 aa8.13□□□□□ -1.11
PPP4R3B-203ENST00000611717 LCE6AA0A183 80 aa8.12□□□□□ -1.11
PPP4R3B-203ENST00000611717 Q8NDZ9 215 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms