RNA–Protein interactions for RNA: ENST00000610970.1

HOXA4-204, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-204ENST00000610970 B9D2Q9BPU9 175 aa15.42■□□□□ 0.06
HOXA4-204ENST00000610970 TRBV7-4A0A0J9YYF1 115 aa15.41■□□□□ 0.06
HOXA4-204ENST00000610970 CCDC179H3BU77 68 aa15.39■□□□□ 0.05
HOXA4-204ENST00000610970 ATOX1O00244 68 aa15.39■□□□□ 0.05
HOXA4-204ENST00000610970 DHRS4-AS1Q9P1J3 65 aa15.39■□□□□ 0.05
HOXA4-204ENST00000610970 APLNQ9ULZ1 77 aa15.39■□□□□ 0.05
HOXA4-204ENST00000610970 IGLV1-50A0A075B6I6 118 aa15.38■□□□□ 0.05
HOXA4-204ENST00000610970 HUWE1Q7Z6Z7 4374 aaKnown RBP15.37■□□□□ 0.05
HOXA4-204ENST00000610970 SPRR1AP35321 89 aa15.37■□□□□ 0.05
HOXA4-204ENST00000610970 DNAH9Q9NYC9 4486 aa15.36■□□□□ 0.05
HOXA4-204ENST00000610970 UBE2DNLQ8IWF7 75 aa15.35■□□□□ 0.05
HOXA4-204ENST00000610970 KRTAP4-16G5E9R7 235 aaPredicted RBP15.33■□□□□ 0.04
HOXA4-204ENST00000610970 CNBPP62633 177 aaKnown RBP15.33■□□□□ 0.04
HOXA4-204ENST00000610970 Q6ZRX8 168 aa15.33■□□□□ 0.04
HOXA4-204ENST00000610970 B5MCH6 92 aa15.32■□□□□ 0.04
HOXA4-204ENST00000610970 C14orf177Q52M58 125 aa15.31■□□□□ 0.04
HOXA4-204ENST00000610970 MRPL55Q7Z7F7 128 aaKnown RBP15.31■□□□□ 0.04
HOXA4-204ENST00000610970 PRKDCP78527 4128 aaKnown RBP15.31■□□□□ 0.04
HOXA4-204ENST00000610970 ETDCA0A1B0GVM5 59 aa15.31■□□□□ 0.04
HOXA4-204ENST00000610970 FAM168BA1KXE4 195 aa15.31■□□□□ 0.04
HOXA4-204ENST00000610970 UQCRQO14949 82 aa15.3■□□□□ 0.04
HOXA4-204ENST00000610970 KRTAP7-1Q8IUC3 87 aa15.29■□□□□ 0.04
HOXA4-204ENST00000610970 KRTAP1-5Q9BYS1 174 aa15.29■□□□□ 0.04
HOXA4-204ENST00000610970 PSCAO43653 123 aa15.29■□□□□ 0.04
HOXA4-204ENST00000610970 C3orf22Q8N5N4 141 aa15.29■□□□□ 0.04
HOXA4-204ENST00000610970 RPL37AP8A6NKH3 93 aa15.28■□□□□ 0.04
HOXA4-204ENST00000610970 Q6ZVQ6 151 aa15.28■□□□□ 0.04
HOXA4-204ENST00000610970 M0R2N4 97 aa15.27■□□□□ 0.04
HOXA4-204ENST00000610970 C16orf90A8MZG2 172 aa15.26■□□□□ 0.03
HOXA4-204ENST00000610970 COX7CP15954 63 aa15.26■□□□□ 0.03
HOXA4-204ENST00000610970 FAM19A5Q7Z5A7 132 aaPredicted RBP15.26■□□□□ 0.03
HOXA4-204ENST00000610970 COL7A1Q02388 2944 aa15.26■□□□□ 0.03
HOXA4-204ENST00000610970 CXCL6P80162 114 aa15.25■□□□□ 0.03
HOXA4-204ENST00000610970 A0A087WVE0 104 aa15.24■□□□□ 0.03
HOXA4-204ENST00000610970 NUPR2A6NF83 97 aa15.24■□□□□ 0.03
HOXA4-204ENST00000610970 Q8N377 158 aa15.24■□□□□ 0.03
HOXA4-204ENST00000610970 DNAH1Q9P2D7 4330 aa15.23■□□□□ 0.03
HOXA4-204ENST00000610970 LINC01547P58512 204 aaPredicted RBP15.23■□□□□ 0.03
HOXA4-204ENST00000610970 PKIGQ9Y2B9 76 aa15.23■□□□□ 0.03
HOXA4-204ENST00000610970 Q9BRP9 147 aa15.22■□□□□ 0.03
HOXA4-204ENST00000610970 TGP01266 2768 aa15.21■□□□□ 0.03
HOXA4-204ENST00000610970 IGLV5-48A0A075B6I7 105 aa15.21■□□□□ 0.03
HOXA4-204ENST00000610970 REG3GQ6UW15 175 aa15.2■□□□□ 0.02
HOXA4-204ENST00000610970 STAB2Q8WWQ8 2551 aa15.2■□□□□ 0.02
HOXA4-204ENST00000610970 A0A1B0GW54 56 aa15.2■□□□□ 0.02
HOXA4-204ENST00000610970 HAMPP81172 84 aa15.19■□□□□ 0.02
HOXA4-204ENST00000610970 BCE1O60756 84 aa15.18■□□□□ 0.02
HOXA4-204ENST00000610970 FAM19A1Q7Z5A9 133 aa15.18■□□□□ 0.02
HOXA4-204ENST00000610970 SERP2Q8N6R1 65 aa15.18■□□□□ 0.02
HOXA4-204ENST00000610970 DEFB105AQ8NG35 78 aa15.18■□□□□ 0.02
HOXA4-204ENST00000610970 C9orf153Q5TBE3 101 aa15.17■□□□□ 0.02
HOXA4-204ENST00000610970 A0A096LNI7 61 aa15.17■□□□□ 0.02
HOXA4-204ENST00000610970 NBDYA0A0U1RRE5 68 aa15.13■□□□□ 0.01
HOXA4-204ENST00000610970 CRYGAP11844 174 aa15.13■□□□□ 0.01
HOXA4-204ENST00000610970 UBE2BP63146 152 aa15.12■□□□□ 0.01
HOXA4-204ENST00000610970 SS18L2Q9UHA2 77 aa15.11■□□□□ 0.01
HOXA4-204ENST00000610970 TNP2Q05952 138 aa15.1■□□□□ 0.01
HOXA4-204ENST00000610970 IGKV2-24A0A0C4DH68 120 aa15.09■□□□□ 0.01
HOXA4-204ENST00000610970 A0A1W2PNN7 141 aa15.08■□□□□ 0
HOXA4-204ENST00000610970 C9orf163Q8N9P6 203 aa15.08■□□□□ 0
HOXA4-204ENST00000610970 LRCOL1A6NCL2 159 aa15.07■□□□□ 0
HOXA4-204ENST00000610970 FUSP35637 526 aaKnown RBP eCLIP15.07■□□□□ 0
HOXA4-204ENST00000610970 NREPQ16612 68 aa15.06■□□□□ 0
HOXA4-204ENST00000610970 ST20-AS1Q8NBB2 130 aa15.06■□□□□ 0
HOXA4-204ENST00000610970 SMIM20Q8N5G0 67 aa15.06■□□□□ 0
HOXA4-204ENST00000610970 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.05■□□□□ -0
HOXA4-204ENST00000610970 ERC2-IT1O76042 136 aa15.05■□□□□ -0
HOXA4-204ENST00000610970 LINC00474Q9P2X8 69 aa15.04■□□□□ -0
HOXA4-204ENST00000610970 C1orf137Q5JT78 98 aa15.03■□□□□ -0
HOXA4-204ENST00000610970 DYNC2H1Q8NCM8 4307 aaKnown RBP15.03■□□□□ -0
HOXA4-204ENST00000610970 Q6ZRN7 208 aaPredicted RBP15.01□□□□□ -0.01
HOXA4-204ENST00000610970 H0Y9J4 135 aa15□□□□□ -0.01
HOXA4-204ENST00000610970 Q8NBF4 154 aa15□□□□□ -0.01
HOXA4-204ENST00000610970 SPRR4Q96PI1 79 aa14.98□□□□□ -0.01
HOXA4-204ENST00000610970 A0A1W2PNM2 257 aa14.97□□□□□ -0.01
HOXA4-204ENST00000610970 F8WEM9 126 aa14.97□□□□□ -0.01
HOXA4-204ENST00000610970 TRAV7A0A075B6U4 112 aa14.97□□□□□ -0.01
HOXA4-204ENST00000610970 SMIM29Q86T20 159 aa14.96□□□□□ -0.01
HOXA4-204ENST00000610970 C3orf84H3BNL1 204 aa14.95□□□□□ -0.02
HOXA4-204ENST00000610970 BPY2O14599 106 aa14.95□□□□□ -0.02
HOXA4-204ENST00000610970 SCXQ7RTU7 201 aa14.94□□□□□ -0.02
HOXA4-204ENST00000610970 CHTF8P0CG12 524 aa14.92□□□□□ -0.02
HOXA4-204ENST00000610970 PHF5AQ7RTV0 110 aaKnown RBP14.92□□□□□ -0.02
HOXA4-204ENST00000610970 IGLV8-61A0A075B6I0 122 aa14.92□□□□□ -0.02
HOXA4-204ENST00000610970 PRLHP81277 87 aa14.92□□□□□ -0.02
HOXA4-204ENST00000610970 DNAH7Q8WXX0 4024 aa14.9□□□□□ -0.02
HOXA4-204ENST00000610970 IGKV4-1P06312 121 aa14.88□□□□□ -0.03
HOXA4-204ENST00000610970 LINC00476Q8WZB0 136 aa14.88□□□□□ -0.03
HOXA4-204ENST00000610970 HIGD2AQ9BW72 106 aa14.88□□□□□ -0.03
HOXA4-204ENST00000610970 SPRR1BP22528 89 aa14.87□□□□□ -0.03
HOXA4-204ENST00000610970 CSMD3Q7Z407 3707 aa14.86□□□□□ -0.03
HOXA4-204ENST00000610970 EPM2AB3EWF7 344 aa14.85□□□□□ -0.03
HOXA4-204ENST00000610970 TMEM258P61165 79 aa14.85□□□□□ -0.03
HOXA4-204ENST00000610970 KRTAP11-1Q8IUC1 163 aa14.83□□□□□ -0.04
HOXA4-204ENST00000610970 A0A087WTM6 91 aa14.82□□□□□ -0.04
HOXA4-204ENST00000610970 UBE2AP49459 152 aa14.82□□□□□ -0.04
HOXA4-204ENST00000610970 IGFL1Q6UW32 110 aa14.81□□□□□ -0.04
HOXA4-204ENST00000610970 SPACA4Q8TDM5 124 aa14.8□□□□□ -0.04
HOXA4-204ENST00000610970 PLECQ15149 4684 aaKnown RBP14.79□□□□□ -0.04
HOXA4-204ENST00000610970 Q6ZR54 194 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms