RNA–Protein interactions for RNA: ENST00000607272.2

MSH6-212, Transcript of mutS homolog 6, humanhuman

TSL 2

Gene MSH6, Length 2,219 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-212ENST00000607272 Q6ZRU5 148 aa8.25□□□□□ -1.09
MSH6-212ENST00000607272 PDZD2O15018 2839 aa8.23□□□□□ -1.09
MSH6-212ENST00000607272 KRTAP26-1Q6PEX3 210 aa8.23□□□□□ -1.09
MSH6-212ENST00000607272 FP248Q71RG6 208 aaPredicted RBP8.23□□□□□ -1.09
MSH6-212ENST00000607272 PRO0628Q9UI54 55 aa8.23□□□□□ -1.09
MSH6-212ENST00000607272 Q8N9L7 120 aa8.22□□□□□ -1.09
MSH6-212ENST00000607272 OCR1Q9BZK8 76 aa8.22□□□□□ -1.09
MSH6-212ENST00000607272 F8WDY8 70 aa8.22□□□□□ -1.09
MSH6-212ENST00000607272 C15orf56Q8N910 161 aa8.22□□□□□ -1.09
MSH6-212ENST00000607272 LINC00336Q6ZUF6 198 aa8.21□□□□□ -1.09
MSH6-212ENST00000607272 WFDC10BQ8IUB3 73 aa8.21□□□□□ -1.09
MSH6-212ENST00000607272 H3BNG1 76 aa8.21□□□□□ -1.1
MSH6-212ENST00000607272 A0A0U1RQV1 116 aa8.2□□□□□ -1.1
MSH6-212ENST00000607272 A0A1B0GW54 56 aa8.2□□□□□ -1.1
MSH6-212ENST00000607272 Q6ZRP5 223 aa8.2□□□□□ -1.1
MSH6-212ENST00000607272 KCNQ1DNQ9H478 68 aa8.2□□□□□ -1.1
MSH6-212ENST00000607272 IGLV5-48A0A075B6I7 105 aa8.19□□□□□ -1.1
MSH6-212ENST00000607272 ITPR2Q14571 2701 aa8.19□□□□□ -1.1
MSH6-212ENST00000607272 C3orf84H3BNL1 204 aa8.18□□□□□ -1.1
MSH6-212ENST00000607272 KPRPQ5T749 579 aaPredicted RBP8.18□□□□□ -1.1
MSH6-212ENST00000607272 Q8N377 158 aa8.18□□□□□ -1.1
MSH6-212ENST00000607272 NKAPP1Q8N9T2 125 aa8.18□□□□□ -1.1
MSH6-212ENST00000607272 FUSP35637 526 aaKnown RBP eCLIP8.17□□□□□ -1.1
MSH6-212ENST00000607272 LINC00474Q9P2X8 69 aa8.17□□□□□ -1.1
MSH6-212ENST00000607272 DEFB105AQ8NG35 78 aa8.17□□□□□ -1.1
MSH6-212ENST00000607272 SMR3AQ99954 134 aa8.17□□□□□ -1.1
MSH6-212ENST00000607272 SYCNQ0VAF6 134 aa8.16□□□□□ -1.1
MSH6-212ENST00000607272 DHRS4-AS1Q9P1J3 65 aa8.16□□□□□ -1.1
MSH6-212ENST00000607272 C7orf33Q8WU49 177 aa8.14□□□□□ -1.11
MSH6-212ENST00000607272 TENM4Q6N022 2769 aa8.14□□□□□ -1.11
MSH6-212ENST00000607272 NOTCH2Q04721 2471 aa8.13□□□□□ -1.11
MSH6-212ENST00000607272 HIVEP1P15822 2718 aa8.13□□□□□ -1.11
MSH6-212ENST00000607272 IGKV2D-24A0A075B6R9 120 aa8.13□□□□□ -1.11
MSH6-212ENST00000607272 HIGD2AQ9BW72 106 aa8.13□□□□□ -1.11
MSH6-212ENST00000607272 ESRGQ1W209 222 aa8.12□□□□□ -1.11
MSH6-212ENST00000607272 LINC01556Q5JQF7 62 aa8.12□□□□□ -1.11
MSH6-212ENST00000607272 Q6ZRX8 168 aa8.12□□□□□ -1.11
MSH6-212ENST00000607272 Q6ZTC4 211 aa8.12□□□□□ -1.11
MSH6-212ENST00000607272 A0A1W2PNM2 257 aa8.1□□□□□ -1.11
MSH6-212ENST00000607272 C1orf137Q5JT78 98 aa8.1□□□□□ -1.11
MSH6-212ENST00000607272 UNC79Q9P2D8 2635 aa8.1□□□□□ -1.11
MSH6-212ENST00000607272 TLX1NBP0CAT3 122 aa8.1□□□□□ -1.11
MSH6-212ENST00000607272 SMIM29Q86T20 159 aa8.1□□□□□ -1.11
MSH6-212ENST00000607272 LCE6AA0A183 80 aa8.09□□□□□ -1.11
MSH6-212ENST00000607272 LORP23490 312 aaPredicted RBP8.09□□□□□ -1.11
MSH6-212ENST00000607272 FAM229BQ4G0N7 80 aa8.09□□□□□ -1.11
MSH6-212ENST00000607272 Q8NBF4 154 aa8.09□□□□□ -1.11
MSH6-212ENST00000607272 TENM1Q9UKZ4 2725 aa8.09□□□□□ -1.11
MSH6-212ENST00000607272 KRTAP4-16G5E9R7 235 aaPredicted RBP8.09□□□□□ -1.12
MSH6-212ENST00000607272 ETDCA0A1B0GVM5 59 aa8.08□□□□□ -1.12
MSH6-212ENST00000607272 SPRR4Q96PI1 79 aa8.08□□□□□ -1.12
MSH6-212ENST00000607272 Q9BRP9 147 aa8.08□□□□□ -1.12
MSH6-212ENST00000607272 SPRR1AP35321 89 aa8.07□□□□□ -1.12
MSH6-212ENST00000607272 IGLV1-50A0A075B6I6 118 aa8.07□□□□□ -1.12
MSH6-212ENST00000607272 IGLV5-37A0A075B6J1 123 aa8.07□□□□□ -1.12
MSH6-212ENST00000607272 MPLKIPQ8TAP9 179 aa8.07□□□□□ -1.12
MSH6-212ENST00000607272 RPL37AP8A6NKH3 93 aa8.06□□□□□ -1.12
MSH6-212ENST00000607272 TRRAPQ9Y4A5 3859 aa8.06□□□□□ -1.12
MSH6-212ENST00000607272 BRK1Q8WUW1 75 aa8.05□□□□□ -1.12
MSH6-212ENST00000607272 FASNP49327 2511 aaKnown RBP8.05□□□□□ -1.12
MSH6-212ENST00000607272 RETNQ9HD89 108 aa8.05□□□□□ -1.12
MSH6-212ENST00000607272 ATRQ13535 2644 aa8.04□□□□□ -1.12
MSH6-212ENST00000607272 INAFM1C9JVW0 142 aa8.03□□□□□ -1.12
MSH6-212ENST00000607272 DSCR10P59022 87 aa8.03□□□□□ -1.12
MSH6-212ENST00000607272 ST20-AS1Q8NBB2 130 aa8.03□□□□□ -1.12
MSH6-212ENST00000607272 DNAH10OSP0CZ25 163 aa8.03□□□□□ -1.12
MSH6-212ENST00000607272 DEFB131BA0A096LNP1 70 aa8.02□□□□□ -1.13
MSH6-212ENST00000607272 hDV103S1A0JD37 113 aa8.02□□□□□ -1.13
MSH6-212ENST00000607272 FAM168BA1KXE4 195 aa8.02□□□□□ -1.13
MSH6-212ENST00000607272 ZCCHC13Q8WW36 166 aaKnown RBP8.02□□□□□ -1.13
MSH6-212ENST00000607272 TEP1Q99973 2627 aaKnown RBP8.01□□□□□ -1.13
MSH6-212ENST00000607272 K7EQZ3 153 aa8.01□□□□□ -1.13
MSH6-212ENST00000607272 HELZ2Q9BYK8 2649 aaKnown RBP8□□□□□ -1.13
MSH6-212ENST00000607272 PKD1L1Q8TDX9 2849 aa8□□□□□ -1.13
MSH6-212ENST00000607272 MRPL55Q7Z7F7 128 aaKnown RBP8□□□□□ -1.13
MSH6-212ENST00000607272 PKIGQ9Y2B9 76 aa8□□□□□ -1.13
MSH6-212ENST00000607272 NSD1Q96L73 2696 aaPredicted RBP7.99□□□□□ -1.13
MSH6-212ENST00000607272 J3QKU1 62 aa7.99□□□□□ -1.13
MSH6-212ENST00000607272 UBE2BP63146 152 aa7.99□□□□□ -1.13
MSH6-212ENST00000607272 HCG22E2RYF7 251 aa7.99□□□□□ -1.13
MSH6-212ENST00000607272 C11orf45Q8TAV5 145 aa7.98□□□□□ -1.13
MSH6-212ENST00000607272 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.98□□□□□ -1.13
MSH6-212ENST00000607272 KRTAP7-1Q8IUC3 87 aa7.98□□□□□ -1.13
MSH6-212ENST00000607272 C1orf64Q8NEQ6 169 aa7.98□□□□□ -1.13
MSH6-212ENST00000607272 Q1T7F1 81 aa7.97□□□□□ -1.13
MSH6-212ENST00000607272 LINC00476Q8WZB0 136 aa7.96□□□□□ -1.14
MSH6-212ENST00000607272 NDUFB1O75438 58 aa7.95□□□□□ -1.14
MSH6-212ENST00000607272 KRTAP10-11P60412 298 aa7.95□□□□□ -1.14
MSH6-212ENST00000607272 REG3GQ6UW15 175 aa7.95□□□□□ -1.14
MSH6-212ENST00000607272 PSCAO43653 123 aa7.95□□□□□ -1.14
MSH6-212ENST00000607272 CYP4F30PQ9H0H9 118 aa7.95□□□□□ -1.14
MSH6-212ENST00000607272 OTOGQ6ZRI0 2925 aa7.94□□□□□ -1.14
MSH6-212ENST00000607272 CASC10Q5T4H9 136 aa7.93□□□□□ -1.14
MSH6-212ENST00000607272 C1orf195Q5TG92 126 aa7.92□□□□□ -1.14
MSH6-212ENST00000607272 IGFL1Q6UW32 110 aa7.92□□□□□ -1.14
MSH6-212ENST00000607272 LRCOL1A6NCL2 159 aa7.91□□□□□ -1.14
MSH6-212ENST00000607272 MP68P56378 58 aa7.91□□□□□ -1.14
MSH6-212ENST00000607272 LINC00588Q9Y4M8 146 aa7.91□□□□□ -1.14
MSH6-212ENST00000607272 TENM3Q9P273 2699 aa7.9□□□□□ -1.14
MSH6-212ENST00000607272 IGLV8-61A0A075B6I0 122 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms