RNA–Protein interactions for RNA: ENST00000607187.1

CTSA-215, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-215ENST00000607187 FAM229BQ4G0N7 80 aa5.88□□□□□ -1.47
CTSA-215ENST00000607187 ADAMTSL4-AS1Q5T5F5 129 aa5.88□□□□□ -1.47
CTSA-215ENST00000607187 ANAPC11Q9NYG5 84 aa5.88□□□□□ -1.47
CTSA-215ENST00000607187 UBR4Q5T4S7 5183 aa5.87□□□□□ -1.47
CTSA-215ENST00000607187 TRBV10-2A0A0K0K1G8 114 aa5.87□□□□□ -1.47
CTSA-215ENST00000607187 KRTAP4-16G5E9R7 235 aaPredicted RBP5.87□□□□□ -1.47
CTSA-215ENST00000607187 S100A1P23297 94 aa5.87□□□□□ -1.47
CTSA-215ENST00000607187 KRTDAPP60985 99 aa5.87□□□□□ -1.47
CTSA-215ENST00000607187 LINC00337Q8N6G1 96 aa5.87□□□□□ -1.47
CTSA-215ENST00000607187 MIEN1Q9BRT3 115 aa5.87□□□□□ -1.47
CTSA-215ENST00000607187 NDUFC2O95298 119 aa5.86□□□□□ -1.47
CTSA-215ENST00000607187 KRTAP13-2Q52LG2 175 aa5.86□□□□□ -1.47
CTSA-215ENST00000607187 SOSTDC1Q6X4U4 206 aa5.86□□□□□ -1.47
CTSA-215ENST00000607187 TYMSOSQ8TAI1 123 aa5.86□□□□□ -1.47
CTSA-215ENST00000607187 HIGD2AQ9BW72 106 aa5.86□□□□□ -1.47
CTSA-215ENST00000607187 SPANXB1Q9NS25 103 aaPredicted RBP5.86□□□□□ -1.47
CTSA-215ENST00000607187 TIMM17BO60830 172 aa5.85□□□□□ -1.47
CTSA-215ENST00000607187 DDTP30046 118 aa5.85□□□□□ -1.47
CTSA-215ENST00000607187 KRTAP15-1Q3LI76 137 aa5.85□□□□□ -1.47
CTSA-215ENST00000607187 LITAFQ99732 161 aa5.85□□□□□ -1.47
CTSA-215ENST00000607187 C20orf202A1L168 122 aa5.84□□□□□ -1.47
CTSA-215ENST00000607187 ZNF815PA8K554 130 aa5.84□□□□□ -1.47
CTSA-215ENST00000607187 IGLV6-57P01721 117 aa5.84□□□□□ -1.47
CTSA-215ENST00000607187 NPC2P61916 151 aa5.84□□□□□ -1.47
CTSA-215ENST00000607187 S100A12P80511 92 aa5.84□□□□□ -1.47
CTSA-215ENST00000607187 LPAP08519 4548 aa5.84□□□□□ -1.48
CTSA-215ENST00000607187 ETDCA0A1B0GVM5 59 aa5.83□□□□□ -1.48
CTSA-215ENST00000607187 Q6ZVQ6 151 aa5.83□□□□□ -1.48
CTSA-215ENST00000607187 SPRR4Q96PI1 79 aa5.83□□□□□ -1.48
CTSA-215ENST00000607187 TTTY13Q9BZ97 58 aa5.83□□□□□ -1.48
CTSA-215ENST00000607187 S100A7L2Q5SY68 101 aa5.82□□□□□ -1.48
CTSA-215ENST00000607187 LINC00308Q8TCZ7 52 aa5.82□□□□□ -1.48
CTSA-215ENST00000607187 SMCR5Q8TEV8 140 aa5.82□□□□□ -1.48
CTSA-215ENST00000607187 ZNF706Q9Y5V0 76 aaPredicted RBP5.82□□□□□ -1.48
CTSA-215ENST00000607187 TSPAN13O95857 204 aa5.81□□□□□ -1.48
CTSA-215ENST00000607187 AKR1D1P51857 326 aa5.81□□□□□ -1.48
CTSA-215ENST00000607187 LINC00518Q8N0U6 118 aa5.81□□□□□ -1.48
CTSA-215ENST00000607187 ATOH7Q8N100 152 aa5.81□□□□□ -1.48
CTSA-215ENST00000607187 HIST3H2BBQ8N257 126 aa5.81□□□□□ -1.48
CTSA-215ENST00000607187 SPANXCQ9NY87 97 aa5.81□□□□□ -1.48
CTSA-215ENST00000607187 TRAV23DV6A0A075B6W5 121 aa5.8□□□□□ -1.48
CTSA-215ENST00000607187 Q6ZRX8 168 aa5.8□□□□□ -1.48
CTSA-215ENST00000607187 LINC00304Q8N9R0 145 aa5.8□□□□□ -1.48
CTSA-215ENST00000607187 HIST1H2BLQ99880 126 aa5.8□□□□□ -1.48
CTSA-215ENST00000607187 Q9BRP9 147 aa5.8□□□□□ -1.48
CTSA-215ENST00000607187 LINC00483Q53H64 154 aa5.79□□□□□ -1.48
CTSA-215ENST00000607187 SCGB1D4Q6XE38 83 aa5.79□□□□□ -1.48
CTSA-215ENST00000607187 C3orf22Q8N5N4 141 aa5.79□□□□□ -1.48
CTSA-215ENST00000607187 SPANXDQ9BXN6 97 aa5.79□□□□□ -1.48
CTSA-215ENST00000607187 ZNF73O43830 326 aaPredicted RBP5.78□□□□□ -1.48
CTSA-215ENST00000607187 ERC2-IT1O76042 136 aa5.78□□□□□ -1.48
CTSA-215ENST00000607187 S100A2P29034 98 aa5.78□□□□□ -1.48
CTSA-215ENST00000607187 CTAG1AP78358 180 aa5.78□□□□□ -1.48
CTSA-215ENST00000607187 PRR4Q16378 134 aa5.78□□□□□ -1.48
CTSA-215ENST00000607187 PCP2Q8IVA1 136 aa5.78□□□□□ -1.48
CTSA-215ENST00000607187 CBY1Q9Y3M2 126 aa5.78□□□□□ -1.48
CTSA-215ENST00000607187 S100A6P06703 90 aa5.77□□□□□ -1.49
CTSA-215ENST00000607187 JOSD1Q15040 202 aaPredicted RBP5.77□□□□□ -1.49
CTSA-215ENST00000607187 PPDPFQ9H3Y8 114 aa5.77□□□□□ -1.49
CTSA-215ENST00000607187 OR13C6PQ8NH95 151 aa5.76□□□□□ -1.49
CTSA-215ENST00000607187 IFITM1P13164 125 aa5.75□□□□□ -1.49
CTSA-215ENST00000607187 Q6ZVH6 145 aa5.75□□□□□ -1.49
CTSA-215ENST00000607187 COPS9Q8WXC6 57 aa5.75□□□□□ -1.49
CTSA-215ENST00000607187 HINT1P49773 126 aaPredicted RBP5.74□□□□□ -1.49
CTSA-215ENST00000607187 SPAG11AQ6PDA7 123 aa5.74□□□□□ -1.49
CTSA-215ENST00000607187 FAM218AQ96MZ4 157 aa5.74□□□□□ -1.49
CTSA-215ENST00000607187 Q8NBF4 154 aa5.73□□□□□ -1.49
CTSA-215ENST00000607187 HSBP1L1C9JCN9 74 aa5.72□□□□□ -1.49
CTSA-215ENST00000607187 MUSTN1Q8IVN3 82 aa5.72□□□□□ -1.49
CTSA-215ENST00000607187 RETNLBQ9BQ08 111 aa5.72□□□□□ -1.49
CTSA-215ENST00000607187 PCP4L1A6NKN8 68 aa5.71□□□□□ -1.5
CTSA-215ENST00000607187 ELOF1P60002 83 aaKnown RBP5.71□□□□□ -1.5
CTSA-215ENST00000607187 C6orf99Q4VX62 202 aa5.71□□□□□ -1.5
CTSA-215ENST00000607187 KRTAP19-1Q8IUB9 90 aa5.71□□□□□ -1.5
CTSA-215ENST00000607187 ST20-AS1Q8NBB2 130 aa5.71□□□□□ -1.5
CTSA-215ENST00000607187 RNF213Q63HN8 5207 aa5.71□□□□□ -1.5
CTSA-215ENST00000607187 TRBV7-6A0A0J9YX20 115 aa5.7□□□□□ -1.5
CTSA-215ENST00000607187 KRTAP9-6A0A140TA67 174 aa5.7□□□□□ -1.5
CTSA-215ENST00000607187 KRTAP9-7A8MTY7 169 aa5.7□□□□□ -1.5
CTSA-215ENST00000607187 MOBPQ13875 183 aa5.7□□□□□ -1.5
CTSA-215ENST00000607187 SSBP3-AS1Q7Z2R9 100 aa5.7□□□□□ -1.5
CTSA-215ENST00000607187 DHRS4-AS1Q9P1J3 65 aa5.7□□□□□ -1.5
CTSA-215ENST00000607187 A6NDN8 102 aa5.69□□□□□ -1.5
CTSA-215ENST00000607187 SPINK1P00995 79 aa5.69□□□□□ -1.5
CTSA-215ENST00000607187 COX7BP24311 80 aa5.69□□□□□ -1.5
CTSA-215ENST00000607187 SPRR1BP22528 89 aa5.68□□□□□ -1.5
CTSA-215ENST00000607187 IGLV7-46A0A075B6I9 117 aa5.67□□□□□ -1.5
CTSA-215ENST00000607187 TRAV13-2A0A0B4J235 113 aa5.67□□□□□ -1.5
CTSA-215ENST00000607187 A0A1B0GWB2 263 aa5.67□□□□□ -1.5
CTSA-215ENST00000607187 RPS29P62273 56 aaKnown RBP5.67□□□□□ -1.5
CTSA-215ENST00000607187 TPRXLQ17RH7 258 aa5.67□□□□□ -1.5
CTSA-215ENST00000607187 SEC61GP60059 68 aa5.66□□□□□ -1.5
CTSA-215ENST00000607187 C9orf153Q5TBE3 101 aa5.66□□□□□ -1.5
CTSA-215ENST00000607187 SMIM11BQ8TCY0 68 aa5.66□□□□□ -1.5
CTSA-215ENST00000607187 COX8AP10176 69 aa5.65□□□□□ -1.5
CTSA-215ENST00000607187 SLC25A34Q6PIV7 304 aa5.65□□□□□ -1.5
CTSA-215ENST00000607187 FP248Q71RG6 208 aaPredicted RBP5.65□□□□□ -1.5
CTSA-215ENST00000607187 PRAC1Q96KF2 57 aa5.65□□□□□ -1.5
CTSA-215ENST00000607187 DLEU1O43261 78 aa5.64□□□□□ -1.51
CTSA-215ENST00000607187 Q8N377 158 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms