RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 DNAJC9-AS1A6NH13 148 aa3.17□□□□□ -1.9
LINC01109-201ENST00000603837 IGHV4-38-2P0DP08 117 aa3.17□□□□□ -1.9
LINC01109-201ENST00000603837 IGLV5-52A0A0A0MRZ9 124 aa3.17□□□□□ -1.9
LINC01109-201ENST00000603837 PDE6GP18545 87 aa3.17□□□□□ -1.9
LINC01109-201ENST00000603837 CCL18P55774 89 aa3.17□□□□□ -1.9
LINC01109-201ENST00000603837 LINC00158P58513 81 aa3.17□□□□□ -1.9
LINC01109-201ENST00000603837 C9orf116Q5BN46 136 aaPredicted RBP3.17□□□□□ -1.9
LINC01109-201ENST00000603837 B9D2Q9BPU9 175 aa3.17□□□□□ -1.9
LINC01109-201ENST00000603837 ZNF469Q96JG9 3925 aaPredicted RBP3.16□□□□□ -1.9
LINC01109-201ENST00000603837 IGHV1-8P0DP01 117 aa3.16□□□□□ -1.9
LINC01109-201ENST00000603837 HIGD2BQ4VC39 106 aa3.16□□□□□ -1.9
LINC01109-201ENST00000603837 Q8N9P0 234 aaPredicted RBP3.16□□□□□ -1.9
LINC01109-201ENST00000603837 COX7B2Q8TF08 81 aa3.16□□□□□ -1.9
LINC01109-201ENST00000603837 A8MWP4 228 aa3.16□□□□□ -1.9
LINC01109-201ENST00000603837 NIPBLQ6KC79 2804 aaeCLIP3.16□□□□□ -1.9
LINC01109-201ENST00000603837 WNK1Q9H4A3 2382 aa3.16□□□□□ -1.9
LINC01109-201ENST00000603837 IGKV4-1P06312 121 aa3.16□□□□□ -1.9
LINC01109-201ENST00000603837 DEFB1P60022 68 aa3.16□□□□□ -1.9
LINC01109-201ENST00000603837 Q8N9L7 120 aa3.16□□□□□ -1.9
LINC01109-201ENST00000603837 LINC00467Q9BRT7 94 aa3.16□□□□□ -1.9
LINC01109-201ENST00000603837 CHCHD7Q9BUK0 85 aa3.16□□□□□ -1.9
LINC01109-201ENST00000603837 FN1P02751 2386 aaKnown RBP3.15□□□□□ -1.9
LINC01109-201ENST00000603837 IGHV3-16A0A0C4DH30 117 aa3.15□□□□□ -1.9
LINC01109-201ENST00000603837 LY6G6DO95868 133 aa3.15□□□□□ -1.9
LINC01109-201ENST00000603837 NOTCH2NLQ7Z3S9 236 aa3.15□□□□□ -1.9
LINC01109-201ENST00000603837 LINC01006Q8NI28 216 aa3.15□□□□□ -1.9
LINC01109-201ENST00000603837 RNF5Q99942 180 aa3.15□□□□□ -1.9
LINC01109-201ENST00000603837 CDC42SE2Q9NRR3 84 aa3.15□□□□□ -1.9
LINC01109-201ENST00000603837 TRBV6-4A0A1B0GX49 114 aa3.15□□□□□ -1.91
LINC01109-201ENST00000603837 A0A1W2PPR1 153 aa3.15□□□□□ -1.91
LINC01109-201ENST00000603837 IGHV1-46P01743 117 aa3.15□□□□□ -1.91
LINC01109-201ENST00000603837 EGFEM1PQ0D2K5 195 aa3.15□□□□□ -1.91
LINC01109-201ENST00000603837 ROMO1P60602 79 aa3.14□□□□□ -1.91
LINC01109-201ENST00000603837 LCE6AA0A183 80 aa3.14□□□□□ -1.91
LINC01109-201ENST00000603837 KRTAP15-1Q3LI76 137 aa3.14□□□□□ -1.91
LINC01109-201ENST00000603837 MUC7Q8TAX7 377 aa3.14□□□□□ -1.91
LINC01109-201ENST00000603837 ZCCHC13Q8WW36 166 aaKnown RBP3.14□□□□□ -1.91
LINC01109-201ENST00000603837 MAST4O15021 2626 aa3.14□□□□□ -1.91
LINC01109-201ENST00000603837 DSCR9P59020 149 aa3.13□□□□□ -1.91
LINC01109-201ENST00000603837 IGLV4-60A0A075B6I1 120 aa3.13□□□□□ -1.91
LINC01109-201ENST00000603837 A0A096LNT2 108 aa3.13□□□□□ -1.91
LINC01109-201ENST00000603837 LOC101927531A0A1B0GV80 90 aa3.13□□□□□ -1.91
LINC01109-201ENST00000603837 TOMM7Q9P0U1 55 aa3.13□□□□□ -1.91
LINC01109-201ENST00000603837 BAHCC1Q9P281 2608 aa3.13□□□□□ -1.91
LINC01109-201ENST00000603837 IGHV3-73A0A0B4J1V6 119 aa3.13□□□□□ -1.91
LINC01109-201ENST00000603837 IGLV1-47P01700 117 aa3.13□□□□□ -1.91
LINC01109-201ENST00000603837 LYPD2Q6UXB3 125 aa3.13□□□□□ -1.91
LINC01109-201ENST00000603837 CASC2Q6XLA1 102 aa3.13□□□□□ -1.91
LINC01109-201ENST00000603837 SMIM29Q86T20 159 aa3.13□□□□□ -1.91
LINC01109-201ENST00000603837 LINC00208Q96KT6 92 aa3.13□□□□□ -1.91
LINC01109-201ENST00000603837 ATRQ13535 2644 aa3.13□□□□□ -1.91
LINC01109-201ENST00000603837 OTOGQ6ZRI0 2925 aa3.12□□□□□ -1.91
LINC01109-201ENST00000603837 KRTAP4-5Q9BYR2 181 aa3.12□□□□□ -1.91
LINC01109-201ENST00000603837 IGHV7-81A0A0B4J1V7 117 aa3.12□□□□□ -1.91
LINC01109-201ENST00000603837 NDUFB1O75438 58 aa3.12□□□□□ -1.91
LINC01109-201ENST00000603837 ELOF1P60002 83 aaKnown RBP3.12□□□□□ -1.91
LINC01109-201ENST00000603837 CYSRT1A8MQ03 144 aa3.11□□□□□ -1.91
LINC01109-201ENST00000603837 PROK1P58294 105 aa3.11□□□□□ -1.91
LINC01109-201ENST00000603837 KLK9Q2XQG4 91 aa3.11□□□□□ -1.91
LINC01109-201ENST00000603837 LINC00612Q8N6U2 182 aa3.11□□□□□ -1.91
LINC01109-201ENST00000603837 F8P00451 2351 aa3.11□□□□□ -1.91
LINC01109-201ENST00000603837 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.11□□□□□ -1.91
LINC01109-201ENST00000603837 NDUFA4O00483 81 aa3.11□□□□□ -1.91
LINC01109-201ENST00000603837 LINC00575Q6W349 94 aa3.11□□□□□ -1.91
LINC01109-201ENST00000603837 KAAG1Q9UBP8 84 aa3.11□□□□□ -1.91
LINC01109-201ENST00000603837 TRGV2A0A075B6R0 118 aa3.11□□□□□ -1.91
LINC01109-201ENST00000603837 IGHV3-53P01767 116 aa3.11□□□□□ -1.91
LINC01109-201ENST00000603837 MAPK1IP1LQ8NDC0 245 aa3.11□□□□□ -1.91
LINC01109-201ENST00000603837 NPBQ8NG41 125 aa3.11□□□□□ -1.91
LINC01109-201ENST00000603837 Q9BRP9 147 aa3.11□□□□□ -1.91
LINC01109-201ENST00000603837 ETDCA0A1B0GVM5 59 aa3.1□□□□□ -1.91
LINC01109-201ENST00000603837 H3BQ85 93 aa3.1□□□□□ -1.91
LINC01109-201ENST00000603837 C10orf25Q5T742 122 aa3.1□□□□□ -1.91
LINC01109-201ENST00000603837 IGKV3-7A0A075B6H7 116 aa3.1□□□□□ -1.91
LINC01109-201ENST00000603837 CSAG1Q6PB30 78 aa3.1□□□□□ -1.91
LINC01109-201ENST00000603837 CSNK1G2-AS1Q8NCQ2 148 aa3.1□□□□□ -1.91
LINC01109-201ENST00000603837 HIVEP1P15822 2718 aa3.1□□□□□ -1.91
LINC01109-201ENST00000603837 P0C880 135 aa3.09□□□□□ -1.91
LINC01109-201ENST00000603837 PDZD2O15018 2839 aa3.09□□□□□ -1.91
LINC01109-201ENST00000603837 COX7BP24311 80 aa3.09□□□□□ -1.91
LINC01109-201ENST00000603837 KRTAP10-9P60411 292 aa3.09□□□□□ -1.91
LINC01109-201ENST00000603837 Q6ZQY7 126 aa3.09□□□□□ -1.91
LINC01109-201ENST00000603837 CIRBP-AS1Q8TBR5 109 aa3.09□□□□□ -1.91
LINC01109-201ENST00000603837 MIR22HGQ0VDD5 57 aa3.08□□□□□ -1.92
LINC01109-201ENST00000603837 DEFB114Q30KQ6 69 aa3.08□□□□□ -1.92
LINC01109-201ENST00000603837 ST20-AS1Q8NBB2 130 aa3.08□□□□□ -1.92
LINC01109-201ENST00000603837 WFDC10AQ9H1F0 79 aa3.08□□□□□ -1.92
LINC01109-201ENST00000603837 Q8N9W7 124 aa3.08□□□□□ -1.92
LINC01109-201ENST00000603837 C2CD3Q4AC94 2353 aa3.08□□□□□ -1.92
LINC01109-201ENST00000603837 MINOS1-NBL1R4GNA1 71 aa3.08□□□□□ -1.92
LINC01109-201ENST00000603837 IGLV5-37A0A075B6J1 123 aa3.07□□□□□ -1.92
LINC01109-201ENST00000603837 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.07□□□□□ -1.92
LINC01109-201ENST00000603837 CCL19Q99731 98 aa3.07□□□□□ -1.92
LINC01109-201ENST00000603837 IGKV3-20P01619 116 aa3.07□□□□□ -1.92
LINC01109-201ENST00000603837 SPINK7P58062 85 aa3.07□□□□□ -1.92
LINC01109-201ENST00000603837 Q8NAQ8 132 aa3.07□□□□□ -1.92
LINC01109-201ENST00000603837 DPM3Q9P2X0 92 aa3.07□□□□□ -1.92
LINC01109-201ENST00000603837 NSD1Q96L73 2696 aaPredicted RBP3.07□□□□□ -1.92
LINC01109-201ENST00000603837 ASB16-AS1Q495Z4 193 aa3.06□□□□□ -1.92
LINC01109-201ENST00000603837 SPANXA2-OT1Q8N9U9 137 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms