RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 ZNF73O43830 326 aaPredicted RBP8.32□□□□□ -1.08
SSBP4-211ENST00000601614 TSPEAR-AS2P59090 65 aa8.32□□□□□ -1.08
SSBP4-211ENST00000601614 MAP1LC3CQ9BXW4 147 aa8.32□□□□□ -1.08
SSBP4-211ENST00000601614 C5orf52A6NGY3 159 aa8.31□□□□□ -1.08
SSBP4-211ENST00000601614 LINC00587B1AMM8 73 aa8.31□□□□□ -1.08
SSBP4-211ENST00000601614 S100A7L2Q5SY68 101 aa8.31□□□□□ -1.08
SSBP4-211ENST00000601614 RPS10P5Q9NQ39 176 aa8.31□□□□□ -1.08
SSBP4-211ENST00000601614 MYMXA0A1B0GTQ4 84 aa8.3□□□□□ -1.08
SSBP4-211ENST00000601614 S100PP25815 95 aa8.3□□□□□ -1.08
SSBP4-211ENST00000601614 CD164Q04900 197 aa8.3□□□□□ -1.08
SSBP4-211ENST00000601614 LCE2BO14633 110 aa8.29□□□□□ -1.08
SSBP4-211ENST00000601614 EIF4EBP3O60516 100 aaPredicted RBP8.29□□□□□ -1.08
SSBP4-211ENST00000601614 RHEBQ15382 184 aa8.29□□□□□ -1.08
SSBP4-211ENST00000601614 Q5XG85 94 aa8.29□□□□□ -1.08
SSBP4-211ENST00000601614 SYNE2Q8WXH0 6885 aaKnown RBP8.29□□□□□ -1.08
SSBP4-211ENST00000601614 TRAV12-1A0A0B4J245 112 aa8.28□□□□□ -1.08
SSBP4-211ENST00000601614 COX19Q49B96 90 aa8.28□□□□□ -1.08
SSBP4-211ENST00000601614 NDUFC2O95298 119 aa8.27□□□□□ -1.09
SSBP4-211ENST00000601614 SOSTDC1Q6X4U4 206 aa8.27□□□□□ -1.09
SSBP4-211ENST00000601614 LAMTOR3Q9UHA4 124 aa8.27□□□□□ -1.09
SSBP4-211ENST00000601614 MACF1Q9UPN3 7388 aaKnown RBP8.26□□□□□ -1.09
SSBP4-211ENST00000601614 A0A0G2JQZ4 141 aa8.26□□□□□ -1.09
SSBP4-211ENST00000601614 Q1RN00 199 aa8.26□□□□□ -1.09
SSBP4-211ENST00000601614 SLC25A34Q6PIV7 304 aa8.26□□□□□ -1.09
SSBP4-211ENST00000601614 SMIM29Q86T20 159 aa8.25□□□□□ -1.09
SSBP4-211ENST00000601614 IFI27L1Q96BM0 104 aa8.24□□□□□ -1.09
SSBP4-211ENST00000601614 APOC3P02656 99 aa8.23□□□□□ -1.09
SSBP4-211ENST00000601614 MT2AP02795 61 aa8.23□□□□□ -1.09
SSBP4-211ENST00000601614 NPC2P61916 151 aa8.23□□□□□ -1.09
SSBP4-211ENST00000601614 MIEN1Q9BRT3 115 aa8.23□□□□□ -1.09
SSBP4-211ENST00000601614 PRO1933Q9H354 126 aa8.23□□□□□ -1.09
SSBP4-211ENST00000601614 LEPROTO15243 131 aa8.2□□□□□ -1.1
SSBP4-211ENST00000601614 HINT1P49773 126 aaPredicted RBP8.2□□□□□ -1.1
SSBP4-211ENST00000601614 TRAPPC1Q9Y5R8 145 aa8.2□□□□□ -1.1
SSBP4-211ENST00000601614 SVBPQ8N300 66 aa8.19□□□□□ -1.1
SSBP4-211ENST00000601614 DEFB105AQ8NG35 78 aa8.19□□□□□ -1.1
SSBP4-211ENST00000601614 YPEL4Q96NS1 127 aa8.19□□□□□ -1.1
SSBP4-211ENST00000601614 DHRS4-AS1Q9P1J3 65 aa8.19□□□□□ -1.1
SSBP4-211ENST00000601614 SNAPINO95295 136 aa8.18□□□□□ -1.1
SSBP4-211ENST00000601614 MT1FP04733 61 aa8.18□□□□□ -1.1
SSBP4-211ENST00000601614 ADAMTSL4-AS1Q5T5F5 129 aa8.18□□□□□ -1.1
SSBP4-211ENST00000601614 J3QQQ9 107 aa8.17□□□□□ -1.1
SSBP4-211ENST00000601614 AKR1D1P51857 326 aa8.17□□□□□ -1.1
SSBP4-211ENST00000601614 TAL2Q16559 108 aa8.17□□□□□ -1.1
SSBP4-211ENST00000601614 NDUFA5Q16718 116 aa8.17□□□□□ -1.1
SSBP4-211ENST00000601614 KRTAP9-3Q9BYQ3 159 aa8.17□□□□□ -1.1
SSBP4-211ENST00000601614 ELOF1P60002 83 aaKnown RBP8.15□□□□□ -1.1
SSBP4-211ENST00000601614 TEX49A0A1B0GTD5 131 aa8.14□□□□□ -1.11
SSBP4-211ENST00000601614 H0Y8G0 127 aa8.14□□□□□ -1.11
SSBP4-211ENST00000601614 ATP11AUNQ6ZP68 121 aa8.13□□□□□ -1.11
SSBP4-211ENST00000601614 Q75L30 129 aa8.13□□□□□ -1.11
SSBP4-211ENST00000601614 C20orf202A1L168 122 aa8.12□□□□□ -1.11
SSBP4-211ENST00000601614 OR13C6PQ8NH95 151 aa8.12□□□□□ -1.11
SSBP4-211ENST00000601614 CHCHD1Q96BP2 118 aaKnown RBP8.12□□□□□ -1.11
SSBP4-211ENST00000601614 A0A0J9YXY3 114 aa8.11□□□□□ -1.11
SSBP4-211ENST00000601614 COX7BP24311 80 aa8.11□□□□□ -1.11
SSBP4-211ENST00000601614 NMUP48645 174 aa8.11□□□□□ -1.11
SSBP4-211ENST00000601614 CBY1Q9Y3M2 126 aa8.11□□□□□ -1.11
SSBP4-211ENST00000601614 LGALS3P17931 250 aaKnown RBP8.1□□□□□ -1.11
SSBP4-211ENST00000601614 C6orf99Q4VX62 202 aa8.1□□□□□ -1.11
SSBP4-211ENST00000601614 OBSCN-AS1Q96MR7 158 aa8.1□□□□□ -1.11
SSBP4-211ENST00000601614 TCL1BO95988 128 aa8.08□□□□□ -1.12
SSBP4-211ENST00000601614 PCP2Q8IVA1 136 aa8.08□□□□□ -1.12
SSBP4-211ENST00000601614 IGLV5-48A0A075B6I7 105 aa8.07□□□□□ -1.12
SSBP4-211ENST00000601614 SLC7A5P1Q8MH63 180 aa8.07□□□□□ -1.12
SSBP4-211ENST00000601614 LITAFQ99732 161 aa8.07□□□□□ -1.12
SSBP4-211ENST00000601614 PMCHL2Q9BQD1 86 aa8.07□□□□□ -1.12
SSBP4-211ENST00000601614 SPANXCQ9NY87 97 aa8.07□□□□□ -1.12
SSBP4-211ENST00000601614 LINC00308Q8TCZ7 52 aa8.06□□□□□ -1.12
SSBP4-211ENST00000601614 PLNP26678 52 aa8.05□□□□□ -1.12
SSBP4-211ENST00000601614 LINC00310P59036 64 aa8.05□□□□□ -1.12
SSBP4-211ENST00000601614 KRTAP10-10P60014 251 aa8.05□□□□□ -1.12
SSBP4-211ENST00000601614 HERVK_113P61574 105 aa8.05□□□□□ -1.12
SSBP4-211ENST00000601614 KRTAP19-6Q3LI70 58 aa8.05□□□□□ -1.12
SSBP4-211ENST00000601614 SPANXDQ9BXN6 97 aa8.05□□□□□ -1.12
SSBP4-211ENST00000601614 HSBP1O75506 76 aa8.03□□□□□ -1.12
SSBP4-211ENST00000601614 TRGC2P03986 189 aa8.03□□□□□ -1.12
SSBP4-211ENST00000601614 DPM2O94777 84 aa8.02□□□□□ -1.13
SSBP4-211ENST00000601614 KRTAP6-3Q3LI67 103 aa8.02□□□□□ -1.13
SSBP4-211ENST00000601614 SERF1AO75920 110 aa8□□□□□ -1.13
SSBP4-211ENST00000601614 IGKCP01834 107 aa8□□□□□ -1.13
SSBP4-211ENST00000601614 LEPROTL1O95214 131 aa7.99□□□□□ -1.13
SSBP4-211ENST00000601614 TRBV20-1A0A075B6N2 111 aa7.98□□□□□ -1.13
SSBP4-211ENST00000601614 COLCA2A8K830 154 aa7.98□□□□□ -1.13
SSBP4-211ENST00000601614 Q96NJ1 140 aa7.98□□□□□ -1.13
SSBP4-211ENST00000601614 TRBV7-6A0A0J9YX20 115 aa7.97□□□□□ -1.13
SSBP4-211ENST00000601614 E9PLD3 99 aa7.97□□□□□ -1.13
SSBP4-211ENST00000601614 A0A1B0GWB2 263 aa7.96□□□□□ -1.14
SSBP4-211ENST00000601614 C20orf166-AS1Q96NR2 134 aa7.96□□□□□ -1.14
SSBP4-211ENST00000601614 TRBV7-7A0A0K0K1E9 115 aa7.95□□□□□ -1.14
SSBP4-211ENST00000601614 LINC00846Q9NV44 126 aa7.95□□□□□ -1.14
SSBP4-211ENST00000601614 TIMM17BO60830 172 aa7.94□□□□□ -1.14
SSBP4-211ENST00000601614 LINC00518Q8N0U6 118 aa7.94□□□□□ -1.14
SSBP4-211ENST00000601614 A8MUU9 505 aa7.93□□□□□ -1.14
SSBP4-211ENST00000601614 FABP4P15090 132 aa7.93□□□□□ -1.14
SSBP4-211ENST00000601614 IGFL1Q6UW32 110 aa7.93□□□□□ -1.14
SSBP4-211ENST00000601614 KRTAP16-1A8MUX0 517 aa7.91□□□□□ -1.14
SSBP4-211ENST00000601614 FAM236DA0A1B0GTK5 79 aa7.9□□□□□ -1.14
SSBP4-211ENST00000601614 FAM236CP0DP71 79 aa7.9□□□□□ -1.14
SSBP4-211ENST00000601614 TTTY13Q9BZ97 58 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms