RNA–Protein interactions for RNA: ENST00000601324.1

VRK3-222, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-222ENST00000601324 TIMM21Q9BVV7 248 aa2.11□□□□□ -2.07
VRK3-222ENST00000601324 SEC11CQ9BY50 192 aa2.11□□□□□ -2.07
VRK3-222ENST00000601324 LINC00846Q9NV44 126 aa2.11□□□□□ -2.07
VRK3-222ENST00000601324 CTXND1A0A1B0GTU2 59 aa2.1□□□□□ -2.07
VRK3-222ENST00000601324 TMEM238C9JI98 176 aa2.1□□□□□ -2.07
VRK3-222ENST00000601324 M0R378 163 aa2.1□□□□□ -2.07
VRK3-222ENST00000601324 SLC25A20O43772 301 aa2.1□□□□□ -2.07
VRK3-222ENST00000601324 SSNA1O43805 119 aa2.1□□□□□ -2.07
VRK3-222ENST00000601324 AKR1C3P42330 323 aa2.1□□□□□ -2.07
VRK3-222ENST00000601324 PYY3Q5JQD4 70 aa2.1□□□□□ -2.07
VRK3-222ENST00000601324 FAM19A2Q8N3H0 131 aa2.1□□□□□ -2.07
VRK3-222ENST00000601324 ARPC5O15511 151 aa2.09□□□□□ -2.07
VRK3-222ENST00000601324 PPBPP02775 128 aa2.09□□□□□ -2.07
VRK3-222ENST00000601324 PMCHP20382 165 aa2.09□□□□□ -2.07
VRK3-222ENST00000601324 RPS20P60866 119 aaKnown RBP2.09□□□□□ -2.07
VRK3-222ENST00000601324 RPL37P61927 97 aaKnown RBP2.09□□□□□ -2.07
VRK3-222ENST00000601324 AKR1C8PQ5T2L2 129 aa2.09□□□□□ -2.07
VRK3-222ENST00000601324 ALKAL2Q6UX46 152 aa2.09□□□□□ -2.07
VRK3-222ENST00000601324 NDUFA12Q9UI09 145 aa2.09□□□□□ -2.07
VRK3-222ENST00000601324 TRBV20OR9-2A0A075B6H5 130 aa2.08□□□□□ -2.08
VRK3-222ENST00000601324 C20orf202A1L168 122 aa2.08□□□□□ -2.08
VRK3-222ENST00000601324 MRPS36P82909 103 aaKnown RBP2.08□□□□□ -2.08
VRK3-222ENST00000601324 JOSD1Q15040 202 aaPredicted RBP2.08□□□□□ -2.08
VRK3-222ENST00000601324 SPINT4Q6UDR6 99 aa2.08□□□□□ -2.08
VRK3-222ENST00000601324 SNHG12Q9BXW3 62 aa2.08□□□□□ -2.08
VRK3-222ENST00000601324 GNB1LQ9BYB4 327 aa2.08□□□□□ -2.08
VRK3-222ENST00000601324 TMEM126AQ9H061 195 aa2.08□□□□□ -2.08
VRK3-222ENST00000601324 PRO1933Q9H354 126 aa2.08□□□□□ -2.08
VRK3-222ENST00000601324 KANTRA0A1W2PQU2 76 aa2.07□□□□□ -2.08
VRK3-222ENST00000601324 C9orf92A6NGG3 77 aa2.07□□□□□ -2.08
VRK3-222ENST00000601324 IFNA1P01562 189 aa2.07□□□□□ -2.08
VRK3-222ENST00000601324 NDUFA6P56556 154 aa2.07□□□□□ -2.08
VRK3-222ENST00000601324 SSBP3-AS1Q7Z2R9 100 aa2.07□□□□□ -2.08
VRK3-222ENST00000601324 Q8NDZ9 215 aa2.07□□□□□ -2.08
VRK3-222ENST00000601324 SMIM12Q96EX1 92 aa2.07□□□□□ -2.08
VRK3-222ENST00000601324 ST20Q9HBF5 79 aa2.07□□□□□ -2.08
VRK3-222ENST00000601324 MAP1LC3B2A6NCE7 125 aa2.06□□□□□ -2.08
VRK3-222ENST00000601324 SCGB1A1P11684 91 aa2.06□□□□□ -2.08
VRK3-222ENST00000601324 ADCYAP1P18509 176 aa2.06□□□□□ -2.08
VRK3-222ENST00000601324 RPL39P62891 51 aaKnown RBP2.06□□□□□ -2.08
VRK3-222ENST00000601324 ZNF345Q14585 488 aa2.06□□□□□ -2.08
VRK3-222ENST00000601324 RHEBQ15382 184 aa2.06□□□□□ -2.08
VRK3-222ENST00000601324 COL5A1-AS1Q5SY13 56 aa2.06□□□□□ -2.08
VRK3-222ENST00000601324 RPL7L1Q6DKI1 246 aaKnown RBP2.06□□□□□ -2.08
VRK3-222ENST00000601324 FAM19A1Q7Z5A9 133 aa2.06□□□□□ -2.08
VRK3-222ENST00000601324 Q8IZM0 81 aa2.06□□□□□ -2.08
VRK3-222ENST00000601324 HIST3H2BBQ8N257 126 aa2.06□□□□□ -2.08
VRK3-222ENST00000601324 KCNRGQ8N5I3 272 aa2.06□□□□□ -2.08
VRK3-222ENST00000601324 VPS25Q9BRG1 176 aa2.06□□□□□ -2.08
VRK3-222ENST00000601324 MAP1LC3BQ9GZQ8 125 aa2.06□□□□□ -2.08
VRK3-222ENST00000601324 FXYD6-FXYD2A0A087WZ82 144 aa2.05□□□□□ -2.08
VRK3-222ENST00000601324 A0A1B0GV72 72 aa2.05□□□□□ -2.08
VRK3-222ENST00000601324 K7ERU9 68 aa2.05□□□□□ -2.08
VRK3-222ENST00000601324 PET100P0DJ07 73 aa2.05□□□□□ -2.08
VRK3-222ENST00000601324 CENPWQ5EE01 88 aa2.05□□□□□ -2.08
VRK3-222ENST00000601324 MBD3L1Q8WWY6 194 aa2.05□□□□□ -2.08
VRK3-222ENST00000601324 SPANXA1Q9NS26 97 aa2.05□□□□□ -2.08
VRK3-222ENST00000601324 TGIF2-C20orf24A0A0A6YYL0 155 aa2.04□□□□□ -2.08
VRK3-222ENST00000601324 F8VRH5 84 aa2.04□□□□□ -2.08
VRK3-222ENST00000601324 HIST1H2BKO60814 126 aa2.04□□□□□ -2.08
VRK3-222ENST00000601324 HSBP1O75506 76 aa2.04□□□□□ -2.08
VRK3-222ENST00000601324 IGLV6-57P01721 117 aa2.04□□□□□ -2.08
VRK3-222ENST00000601324 HIST1H2BJP06899 126 aa2.04□□□□□ -2.08
VRK3-222ENST00000601324 FABP4P15090 132 aa2.04□□□□□ -2.08
VRK3-222ENST00000601324 HIST1H2BOP23527 126 aa2.04□□□□□ -2.08
VRK3-222ENST00000601324 HIST1H2BBP33778 126 aa2.04□□□□□ -2.08
VRK3-222ENST00000601324 SPRR1AP35321 89 aa2.04□□□□□ -2.08
VRK3-222ENST00000601324 HIST1H2BDP58876 126 aa2.04□□□□□ -2.08
VRK3-222ENST00000601324 HIST1H2BCP62807 126 aa2.04□□□□□ -2.08
VRK3-222ENST00000601324 HBBP68871 147 aa2.04□□□□□ -2.08
VRK3-222ENST00000601324 CCL20P78556 96 aa2.04□□□□□ -2.08
VRK3-222ENST00000601324 HIST2H2BEQ16778 126 aa2.04□□□□□ -2.08
VRK3-222ENST00000601324 C6orf99Q4VX62 202 aa2.04□□□□□ -2.08
VRK3-222ENST00000601324 LUZP6Q538Z0 58 aa2.04□□□□□ -2.08
VRK3-222ENST00000601324 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.04□□□□□ -2.08
VRK3-222ENST00000601324 FAM19A3Q7Z5A8 133 aa2.04□□□□□ -2.08
VRK3-222ENST00000601324 SMCR5Q8TEV8 140 aa2.04□□□□□ -2.08
VRK3-222ENST00000601324 HIST1H2BHQ93079 126 aa2.04□□□□□ -2.08
VRK3-222ENST00000601324 YPEL4Q96NS1 127 aa2.04□□□□□ -2.08
VRK3-222ENST00000601324 HIST1H2BNQ99877 126 aa2.04□□□□□ -2.08
VRK3-222ENST00000601324 HIST1H2BMQ99879 126 aa2.04□□□□□ -2.08
VRK3-222ENST00000601324 HIST1H2BLQ99880 126 aa2.04□□□□□ -2.08
VRK3-222ENST00000601324 MIEN1Q9BRT3 115 aa2.04□□□□□ -2.08
VRK3-222ENST00000601324 HIGD2AQ9BW72 106 aa2.04□□□□□ -2.08
VRK3-222ENST00000601324 KRTAP2-1Q9BYU5 128 aa2.04□□□□□ -2.08
VRK3-222ENST00000601324 K7EN84 100 aa2.03□□□□□ -2.08
VRK3-222ENST00000601324 PSPHP1O15172 72 aa2.03□□□□□ -2.08
VRK3-222ENST00000601324 IGKV4-1P06312 121 aa2.03□□□□□ -2.08
VRK3-222ENST00000601324 SMAGPQ0VAQ4 97 aa2.03□□□□□ -2.08
VRK3-222ENST00000601324 OCIAD2Q56VL3 154 aa2.03□□□□□ -2.08
VRK3-222ENST00000601324 AMN1Q8IY45 258 aa2.03□□□□□ -2.08
VRK3-222ENST00000601324 TMEM191AQ9H0A3 160 aa2.03□□□□□ -2.08
VRK3-222ENST00000601324 ZNF706Q9Y5V0 76 aaPredicted RBP2.03□□□□□ -2.08
VRK3-222ENST00000601324 TRBV24-1A0A075B6N3 115 aa2.02□□□□□ -2.09
VRK3-222ENST00000601324 ERC2-IT1O76042 136 aa2.02□□□□□ -2.09
VRK3-222ENST00000601324 FCER1GP30273 86 aa2.02□□□□□ -2.09
VRK3-222ENST00000601324 CKS1BP61024 79 aa2.02□□□□□ -2.09
VRK3-222ENST00000601324 Q6Q795 121 aa2.02□□□□□ -2.09
VRK3-222ENST00000601324 FAM231DQ6ZW35 169 aa2.02□□□□□ -2.09
VRK3-222ENST00000601324 C1orf64Q8NEQ6 169 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms