RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 SPCS1Q9Y6A9 102 aa14.18□□□□□ -0.14
IRF3-228ENST00000601291 H0YGX0 51 aa14.17□□□□□ -0.14
IRF3-228ENST00000601291 DNAH5Q8TE73 4624 aa14.16□□□□□ -0.14
IRF3-228ENST00000601291 TRBV20-1A0A075B6N2 111 aa14.16□□□□□ -0.14
IRF3-228ENST00000601291 TRBV7-6A0A0J9YX20 115 aa14.14□□□□□ -0.15
IRF3-228ENST00000601291 REG3GQ6UW15 175 aa14.14□□□□□ -0.15
IRF3-228ENST00000601291 K7EP34 96 aa14.13□□□□□ -0.15
IRF3-228ENST00000601291 GTF2H5Q6ZYL4 71 aa14.13□□□□□ -0.15
IRF3-228ENST00000601291 CLEC2BQ92478 149 aa14.13□□□□□ -0.15
IRF3-228ENST00000601291 TCL1BO95988 128 aa14.13□□□□□ -0.15
IRF3-228ENST00000601291 CIRBP-AS1Q8TBR5 109 aa14.13□□□□□ -0.15
IRF3-228ENST00000601291 COX7BP24311 80 aa14.12□□□□□ -0.15
IRF3-228ENST00000601291 ATXN8Q156A1 80 aa14.12□□□□□ -0.15
IRF3-228ENST00000601291 SCXQ7RTU7 201 aa14.12□□□□□ -0.15
IRF3-228ENST00000601291 SPRR1AP35321 89 aa14.11□□□□□ -0.15
IRF3-228ENST00000601291 ETDCA0A1B0GVM5 59 aa14.1□□□□□ -0.15
IRF3-228ENST00000601291 ELOF1P60002 83 aaKnown RBP14.1□□□□□ -0.15
IRF3-228ENST00000601291 RYR3Q15413 4870 aa14.1□□□□□ -0.15
IRF3-228ENST00000601291 LST1O00453 97 aa14.09□□□□□ -0.15
IRF3-228ENST00000601291 SNCGO76070 127 aa14.07□□□□□ -0.16
IRF3-228ENST00000601291 KRTAP11-1Q8IUC1 163 aa14.07□□□□□ -0.16
IRF3-228ENST00000601291 FAM218AQ96MZ4 157 aa14.07□□□□□ -0.16
IRF3-228ENST00000601291 KRTAP4-16G5E9R7 235 aaPredicted RBP14.06□□□□□ -0.16
IRF3-228ENST00000601291 H3BMG7 143 aa14.05□□□□□ -0.16
IRF3-228ENST00000601291 A0A1B0GX51 115 aa14.05□□□□□ -0.16
IRF3-228ENST00000601291 SLC25A20O43772 301 aa14.05□□□□□ -0.16
IRF3-228ENST00000601291 LINC00575Q6W349 94 aa14.05□□□□□ -0.16
IRF3-228ENST00000601291 B5MCH6 92 aa14.04□□□□□ -0.16
IRF3-228ENST00000601291 Q6ZRX8 168 aa14.04□□□□□ -0.16
IRF3-228ENST00000601291 LINC00528Q8N1L1 170 aa14.04□□□□□ -0.16
IRF3-228ENST00000601291 TRACP01848 142 aa14.03□□□□□ -0.16
IRF3-228ENST00000601291 HAMPP81172 84 aa14.03□□□□□ -0.16
IRF3-228ENST00000601291 FAM19A1Q7Z5A9 133 aa14.03□□□□□ -0.16
IRF3-228ENST00000601291 UBE2V1Q13404 147 aa14.02□□□□□ -0.16
IRF3-228ENST00000601291 DNAH8Q96JB1 4490 aa14.02□□□□□ -0.17
IRF3-228ENST00000601291 DNAL4O96015 105 aa14.01□□□□□ -0.17
IRF3-228ENST00000601291 hADV29S1A0JD25 119 aa14□□□□□ -0.17
IRF3-228ENST00000601291 BCE1O60756 84 aa14□□□□□ -0.17
IRF3-228ENST00000601291 INAFM2P0DMQ5 153 aa13.99□□□□□ -0.17
IRF3-228ENST00000601291 DHRS4-AS1Q9P1J3 65 aa13.99□□□□□ -0.17
IRF3-228ENST00000601291 PSORS1C2Q9UIG4 136 aa13.99□□□□□ -0.17
IRF3-228ENST00000601291 UBE2AP49459 152 aa13.97□□□□□ -0.17
IRF3-228ENST00000601291 PRLHP81277 87 aa13.96□□□□□ -0.17
IRF3-228ENST00000601291 C9JAW5 83 aa13.96□□□□□ -0.18
IRF3-228ENST00000601291 H0Y9J4 135 aa13.96□□□□□ -0.18
IRF3-228ENST00000601291 PKHD1P08F94 4074 aa13.96□□□□□ -0.18
IRF3-228ENST00000601291 C1orf137Q5JT78 98 aa13.95□□□□□ -0.18
IRF3-228ENST00000601291 Q9BRP9 147 aa13.94□□□□□ -0.18
IRF3-228ENST00000601291 XGP55808 180 aa13.92□□□□□ -0.18
IRF3-228ENST00000601291 LRP1BQ9NZR2 4599 aa13.91□□□□□ -0.18
IRF3-228ENST00000601291 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.91□□□□□ -0.18
IRF3-228ENST00000601291 MTURNQ8N3F0 131 aa13.91□□□□□ -0.18
IRF3-228ENST00000601291 DYNC1H1Q14204 4646 aaKnown RBP13.9□□□□□ -0.18
IRF3-228ENST00000601291 Q6ZQY7 126 aa13.9□□□□□ -0.18
IRF3-228ENST00000601291 SMCR5Q8TEV8 140 aa13.9□□□□□ -0.18
IRF3-228ENST00000601291 HIGD2AQ9BW72 106 aa13.9□□□□□ -0.18
IRF3-228ENST00000601291 ORMDL1Q9P0S3 153 aa13.9□□□□□ -0.18
IRF3-228ENST00000601291 F8W1H4 67 aa13.89□□□□□ -0.19
IRF3-228ENST00000601291 KRTAP13-1Q8IUC0 172 aa13.88□□□□□ -0.19
IRF3-228ENST00000601291 PRO0461Q9UI25 63 aa13.88□□□□□ -0.19
IRF3-228ENST00000601291 H3BT86 120 aa13.87□□□□□ -0.19
IRF3-228ENST00000601291 GHRHP01286 108 aa13.87□□□□□ -0.19
IRF3-228ENST00000601291 OCIAD2Q56VL3 154 aa13.87□□□□□ -0.19
IRF3-228ENST00000601291 IGLV7-43P04211 117 aa13.85□□□□□ -0.19
IRF3-228ENST00000601291 BAALC-AS2P0C853 105 aa13.85□□□□□ -0.19
IRF3-228ENST00000601291 ANKRD29Q8N6D5 301 aa13.84□□□□□ -0.19
IRF3-228ENST00000601291 H3BQ85 93 aa13.83□□□□□ -0.19
IRF3-228ENST00000601291 ZNF861PO60384 105 aa13.83□□□□□ -0.19
IRF3-228ENST00000601291 ERC2-IT1O76042 136 aa13.83□□□□□ -0.19
IRF3-228ENST00000601291 TMEM256-PLSCR3K7ERE1 68 aa13.81□□□□□ -0.2
IRF3-228ENST00000601291 SMCPP49901 116 aaPredicted RBP13.81□□□□□ -0.2
IRF3-228ENST00000601291 CDK2AP2O75956 126 aa13.79□□□□□ -0.2
IRF3-228ENST00000601291 RPL37AP61513 92 aaKnown RBP13.79□□□□□ -0.2
IRF3-228ENST00000601291 ST20-AS1Q8NBB2 130 aa13.79□□□□□ -0.2
IRF3-228ENST00000601291 LINC01600Q96MT4 127 aa13.79□□□□□ -0.2
IRF3-228ENST00000601291 SMR3BP02814 79 aaPredicted RBP13.78□□□□□ -0.2
IRF3-228ENST00000601291 DEFB105AQ8NG35 78 aa13.78□□□□□ -0.2
IRF3-228ENST00000601291 PPDPFLQ8WWR9 84 aa13.77□□□□□ -0.21
IRF3-228ENST00000601291 IGLV5-48A0A075B6I7 105 aa13.75□□□□□ -0.21
IRF3-228ENST00000601291 APOBP04114 4563 aaKnown RBP13.74□□□□□ -0.21
IRF3-228ENST00000601291 LINC01547P58512 204 aaPredicted RBP13.74□□□□□ -0.21
IRF3-228ENST00000601291 ZNF706Q9Y5V0 76 aaPredicted RBP13.74□□□□□ -0.21
IRF3-228ENST00000601291 TEX49A0A1B0GTD5 131 aa13.73□□□□□ -0.21
IRF3-228ENST00000601291 Q8N377 158 aa13.72□□□□□ -0.21
IRF3-228ENST00000601291 ETDBQ3ZM63 59 aa13.71□□□□□ -0.22
IRF3-228ENST00000601291 TEN1Q86WV5 123 aa13.71□□□□□ -0.22
IRF3-228ENST00000601291 LAMTOR3Q9UHA4 124 aa13.7□□□□□ -0.22
IRF3-228ENST00000601291 GAGE2AQ6NT46 116 aa13.69□□□□□ -0.22
IRF3-228ENST00000601291 SPRR4Q96PI1 79 aa13.68□□□□□ -0.22
IRF3-228ENST00000601291 SPRR1BP22528 89 aa13.66□□□□□ -0.22
IRF3-228ENST00000601291 NDUFV3P56181 108 aaKnown RBP13.66□□□□□ -0.22
IRF3-228ENST00000601291 JMJD7-PLA2G4BH0Y9G9 81 aa13.65□□□□□ -0.22
IRF3-228ENST00000601291 FAM229AH3BQW9 127 aa13.65□□□□□ -0.22
IRF3-228ENST00000601291 PLA2G1BP04054 148 aaKnown RBP13.63□□□□□ -0.23
IRF3-228ENST00000601291 C3orf22Q8N5N4 141 aa13.62□□□□□ -0.23
IRF3-228ENST00000601291 A0A1B0GV72 72 aa13.62□□□□□ -0.23
IRF3-228ENST00000601291 LINC00483Q53H64 154 aa13.62□□□□□ -0.23
IRF3-228ENST00000601291 F8WEM9 126 aa13.61□□□□□ -0.23
IRF3-228ENST00000601291 SPINK6Q6UWN8 80 aa13.61□□□□□ -0.23
IRF3-228ENST00000601291 EPPK1P58107 5090 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms