RNA–Protein interactions for RNA: ENST00000600872.5

FKRP-223, Transcript of fukutin related protein, humanhuman

TSL 4

Gene FKRP, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FKRP-223ENST00000600872 LINC01545Q5VT33 79 aa7.28□□□□□ -1.24
FKRP-223ENST00000600872 ZNF706Q9Y5V0 76 aaPredicted RBP7.28□□□□□ -1.24
FKRP-223ENST00000600872 Q6ZRX8 168 aa7.27□□□□□ -1.25
FKRP-223ENST00000600872 PPDPFQ9H3Y8 114 aa7.27□□□□□ -1.25
FKRP-223ENST00000600872 SPAG11AQ6PDA7 123 aa7.26□□□□□ -1.25
FKRP-223ENST00000600872 IGLV7-46A0A075B6I9 117 aa7.25□□□□□ -1.25
FKRP-223ENST00000600872 NPC2P61916 151 aa7.25□□□□□ -1.25
FKRP-223ENST00000600872 COA6Q5JTJ3 125 aaKnown RBP7.25□□□□□ -1.25
FKRP-223ENST00000600872 Q8NBF4 154 aa7.25□□□□□ -1.25
FKRP-223ENST00000600872 C3orf79P0CE67 100 aa7.23□□□□□ -1.25
FKRP-223ENST00000600872 GAGE2AQ6NT46 116 aa7.23□□□□□ -1.25
FKRP-223ENST00000600872 PET117Q6UWS5 81 aa7.23□□□□□ -1.25
FKRP-223ENST00000600872 MIEN1Q9BRT3 115 aa7.23□□□□□ -1.25
FKRP-223ENST00000600872 TTTY13Q9BZ97 58 aa7.23□□□□□ -1.25
FKRP-223ENST00000600872 TRAV23DV6A0A075B6W5 121 aa7.22□□□□□ -1.25
FKRP-223ENST00000600872 TIMM17BO60830 172 aa7.22□□□□□ -1.25
FKRP-223ENST00000600872 LINC00308Q8TCZ7 52 aa7.22□□□□□ -1.25
FKRP-223ENST00000600872 ZNF73O43830 326 aaPredicted RBP7.21□□□□□ -1.26
FKRP-223ENST00000600872 S100A12P80511 92 aa7.21□□□□□ -1.26
FKRP-223ENST00000600872 S100A7L2Q5SY68 101 aa7.21□□□□□ -1.26
FKRP-223ENST00000600872 FAT4Q6V0I7 4981 aa7.2□□□□□ -1.26
FKRP-223ENST00000600872 MOBPQ13875 183 aa7.2□□□□□ -1.26
FKRP-223ENST00000600872 FP248Q71RG6 208 aaPredicted RBP7.2□□□□□ -1.26
FKRP-223ENST00000600872 SPINK1P00995 79 aa7.19□□□□□ -1.26
FKRP-223ENST00000600872 KRTAP13-3Q3SY46 172 aa7.19□□□□□ -1.26
FKRP-223ENST00000600872 SSBP3-AS1Q7Z2R9 100 aa7.19□□□□□ -1.26
FKRP-223ENST00000600872 ST20-AS1Q8NBB2 130 aa7.19□□□□□ -1.26
FKRP-223ENST00000600872 CDIP1Q9H305 208 aa7.19□□□□□ -1.26
FKRP-223ENST00000600872 SPANXCQ9NY87 97 aa7.19□□□□□ -1.26
FKRP-223ENST00000600872 IGLV9-49A0A0B4J1Y8 123 aa7.18□□□□□ -1.26
FKRP-223ENST00000600872 ZNF815PA8K554 130 aa7.18□□□□□ -1.26
FKRP-223ENST00000600872 Q8N377 158 aa7.18□□□□□ -1.26
FKRP-223ENST00000600872 RPS29P62273 56 aaKnown RBP7.17□□□□□ -1.26
FKRP-223ENST00000600872 LORP23490 312 aaPredicted RBP7.16□□□□□ -1.26
FKRP-223ENST00000600872 JOSD1Q15040 202 aaPredicted RBP7.16□□□□□ -1.26
FKRP-223ENST00000600872 ANKRD39Q53RE8 183 aa7.16□□□□□ -1.26
FKRP-223ENST00000600872 C5orf52A6NGY3 159 aa7.15□□□□□ -1.26
FKRP-223ENST00000600872 SPRR1BP22528 89 aa7.15□□□□□ -1.26
FKRP-223ENST00000600872 KRTDAPP60985 99 aa7.15□□□□□ -1.26
FKRP-223ENST00000600872 SPANXDQ9BXN6 97 aa7.14□□□□□ -1.27
FKRP-223ENST00000600872 ELOF1P60002 83 aaKnown RBP7.12□□□□□ -1.27
FKRP-223ENST00000600872 OR13C6PQ8NH95 151 aa7.12□□□□□ -1.27
FKRP-223ENST00000600872 PCP2Q8IVA1 136 aa7.11□□□□□ -1.27
FKRP-223ENST00000600872 ATOH7Q8N100 152 aa7.11□□□□□ -1.27
FKRP-223ENST00000600872 KRTAP4-1Q9BYQ7 146 aa7.11□□□□□ -1.27
FKRP-223ENST00000600872 CBY1Q9Y3M2 126 aa7.11□□□□□ -1.27
FKRP-223ENST00000600872 A0A0U1RQV1 116 aa7.1□□□□□ -1.27
FKRP-223ENST00000600872 C6orf99Q4VX62 202 aa7.1□□□□□ -1.27
FKRP-223ENST00000600872 LINC00518Q8N0U6 118 aa7.1□□□□□ -1.27
FKRP-223ENST00000600872 HINT1P49773 126 aaPredicted RBP7.09□□□□□ -1.27
FKRP-223ENST00000600872 ASB16-AS1Q495Z4 193 aa7.09□□□□□ -1.27
FKRP-223ENST00000600872 C9orf153Q5TBE3 101 aa7.09□□□□□ -1.27
FKRP-223ENST00000600872 DHRS4-AS1Q9P1J3 65 aa7.09□□□□□ -1.27
FKRP-223ENST00000600872 SLC25A20O43772 301 aa7.08□□□□□ -1.28
FKRP-223ENST00000600872 COX7BP24311 80 aa7.08□□□□□ -1.28
FKRP-223ENST00000600872 LINC01547P58512 204 aaPredicted RBP7.08□□□□□ -1.28
FKRP-223ENST00000600872 TRBV7-6A0A0J9YX20 115 aa7.07□□□□□ -1.28
FKRP-223ENST00000600872 IFITM1P13164 125 aa7.07□□□□□ -1.28
FKRP-223ENST00000600872 SCGB1D4Q6XE38 83 aa7.07□□□□□ -1.28
FKRP-223ENST00000600872 MUSTN1Q8IVN3 82 aa7.07□□□□□ -1.28
FKRP-223ENST00000600872 C20orf202A1L168 122 aa7.06□□□□□ -1.28
FKRP-223ENST00000600872 Q6ZVH6 145 aa7.06□□□□□ -1.28
FKRP-223ENST00000600872 SMIM29Q86T20 159 aa7.06□□□□□ -1.28
FKRP-223ENST00000600872 HIST3H2BBQ8N257 126 aa7.06□□□□□ -1.28
FKRP-223ENST00000600872 XP32Q5T750 250 aa7.04□□□□□ -1.28
FKRP-223ENST00000600872 HIST1H2BLQ99880 126 aa7.04□□□□□ -1.28
FKRP-223ENST00000600872 IGLV5-48A0A075B6I7 105 aa7.03□□□□□ -1.28
FKRP-223ENST00000600872 A0A1B0GWB2 263 aa7.03□□□□□ -1.28
FKRP-223ENST00000600872 S100A1P23297 94 aa7.03□□□□□ -1.28
FKRP-223ENST00000600872 SLC25A34Q6PIV7 304 aa7.02□□□□□ -1.29
FKRP-223ENST00000600872 LAMTOR3Q9UHA4 124 aa7.02□□□□□ -1.29
FKRP-223ENST00000600872 TEX49A0A1B0GTD5 131 aa7.01□□□□□ -1.29
FKRP-223ENST00000600872 A6NDN8 102 aa7.01□□□□□ -1.29
FKRP-223ENST00000600872 AKR1D1P51857 326 aa7.01□□□□□ -1.29
FKRP-223ENST00000600872 SNRPEP62304 92 aaKnown RBP7.01□□□□□ -1.29
FKRP-223ENST00000600872 Q1RN00 199 aa7.01□□□□□ -1.29
FKRP-223ENST00000600872 HRCT1Q6UXD1 115 aa7.01□□□□□ -1.29
FKRP-223ENST00000600872 DEFB105AQ8NG35 78 aa7.01□□□□□ -1.29
FKRP-223ENST00000600872 SMIM11BQ8TCY0 68 aa7.01□□□□□ -1.29
FKRP-223ENST00000600872 COPS9Q8WXC6 57 aa7.01□□□□□ -1.29
FKRP-223ENST00000600872 TAL2Q16559 108 aa7□□□□□ -1.29
FKRP-223ENST00000600872 CD164Q04900 197 aa6.99□□□□□ -1.29
FKRP-223ENST00000600872 KRTAP9-2Q9BYQ4 174 aa6.99□□□□□ -1.29
FKRP-223ENST00000600872 TRAV13-2A0A0B4J235 113 aa6.98□□□□□ -1.29
FKRP-223ENST00000600872 A0A0G2JQZ4 141 aa6.98□□□□□ -1.29
FKRP-223ENST00000600872 SEC61BP60468 96 aaKnown RBP6.98□□□□□ -1.29
FKRP-223ENST00000600872 Q5XG85 94 aa6.98□□□□□ -1.29
FKRP-223ENST00000600872 A4D1N5 150 aa6.97□□□□□ -1.29
FKRP-223ENST00000600872 LIMD2Q9BT23 127 aa6.97□□□□□ -1.29
FKRP-223ENST00000600872 PRO1933Q9H354 126 aa6.97□□□□□ -1.29
FKRP-223ENST00000600872 S100A2P29034 98 aa6.95□□□□□ -1.3
FKRP-223ENST00000600872 KRTAP19-2Q3LHN2 52 aa6.95□□□□□ -1.3
FKRP-223ENST00000600872 H7C2G1 150 aa6.94□□□□□ -1.3
FKRP-223ENST00000600872 C1orf195Q5TG92 126 aa6.93□□□□□ -1.3
FKRP-223ENST00000600872 LINC00575Q6W349 94 aa6.93□□□□□ -1.3
FKRP-223ENST00000600872 C9orf92A6NGG3 77 aa6.92□□□□□ -1.3
FKRP-223ENST00000600872 NHP2Q9NX24 153 aaKnown RBP6.91□□□□□ -1.3
FKRP-223ENST00000600872 HSBP1L1C9JCN9 74 aa6.9□□□□□ -1.3
FKRP-223ENST00000600872 IGLV8-61A0A075B6I0 122 aa6.89□□□□□ -1.31
FKRP-223ENST00000600872 S100A6P06703 90 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms